Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS30175

Experiment: L-Valine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine 10 mM (C)
6,710,618	+		PFLU_RS30165	0.72	+2.6
6,710,618	+		PFLU_RS30165	0.72	-1.5
6,710,619	-		PFLU_RS30165	0.72	-0.4
6,710,619	-		PFLU_RS30165	0.72	+2.2
6,710,663	+		PFLU_RS30165	0.77	-0.2
6,710,663	+		PFLU_RS30165	0.77	-0.4
6,710,664	-		PFLU_RS30165	0.77	+0.8
6,710,689	-		PFLU_RS30165	0.80	+1.6
6,710,833	+				+2.2
6,710,834	-				+0.2
6,710,834	-				+1.2
6,710,834	-				+2.2
6,710,839	-				-0.8
6,710,881	+				-0.4
6,710,882	-				-0.5
6,710,962	+		PFLU_RS30170	0.15	-0.2
6,710,963	-		PFLU_RS30170	0.16	-2.5
6,711,126	+		PFLU_RS30170	0.41	-1.4
6,711,371	+		PFLU_RS30170	0.79	+0.4
6,711,371	+		PFLU_RS30170	0.79	+2.2
6,711,371	+		PFLU_RS30170	0.79	-0.8
6,711,371	+		PFLU_RS30170	0.79	+0.6
6,711,371	+		PFLU_RS30170	0.79	-0.2
6,711,371	+		PFLU_RS30170	0.79	-1.0
6,711,371	+		PFLU_RS30170	0.79	-0.6
6,711,371	+		PFLU_RS30170	0.79	-0.6
6,711,371	+		PFLU_RS30170	0.79	-1.4
6,711,372	-		PFLU_RS30170	0.79	-0.6
6,711,372	-		PFLU_RS30170	0.79	-1.4
6,711,372	-		PFLU_RS30170	0.79	+1.2
6,711,372	-		PFLU_RS30170	0.79	-0.8
6,711,372	-		PFLU_RS30170	0.79	-1.2
6,711,372	-		PFLU_RS30170	0.79	-0.4
6,711,372	-		PFLU_RS30170	0.79	-1.0
6,711,372	-		PFLU_RS30170	0.79	-1.1
6,711,372	-		PFLU_RS30170	0.79	+1.7
6,711,372	-		PFLU_RS30170	0.79	-0.2
6,711,372	-		PFLU_RS30170	0.79	+0.4
6,711,372	-		PFLU_RS30170	0.79	-0.8
6,711,372	-		PFLU_RS30170	0.79	-0.2
6,711,372	-		PFLU_RS30170	0.79	+0.2
6,711,404	+		PFLU_RS30170	0.84	-0.6
6,711,405	-		PFLU_RS30170	0.84	-0.6
6,713,417	-				-1.9
6,713,417	-				-0.8
6,713,417	-				+2.2
6,713,417	-				-2.5
6,713,417	-				-0.7
6,713,417	-				-1.6
6,713,417	-				-1.2
6,713,417	-				-0.7
6,713,417	-				-0.2
6,713,417	-				+1.3
6,713,417	-				-0.4
6,713,417	-				+0.2
6,713,417	-				+1.2
6,713,417	-				-1.3
6,713,417	-				-2.4
6,713,417	-				+0.2
6,713,417	-				+0.5
6,713,417	-				-0.6
6,713,417	-				+0.2
6,713,417	-				+0.8
6,713,417	-				+1.6
6,713,417	-				+2.3
6,713,417	-				+1.9
6,713,417	-				+1.0
6,713,417	-				+0.2
6,713,417	-				+0.0
6,713,421	-				+0.2
6,713,421	-				-0.8
6,713,421	-				-0.2
6,713,421	-				-0.3
6,713,421	-				+0.6
6,713,421	-				-2.6
6,713,421	-				-1.3
6,713,421	-				+1.4
6,713,421	-				-0.8
6,713,421	-				-1.8
6,713,421	-				-1.3
6,713,421	-				-2.8
6,713,425	-				+0.3
6,713,425	-				+0.6
6,713,425	-				-1.4
6,713,425	-				+0.1
6,713,425	-				+2.0
6,713,425	-				-0.8
6,713,425	-				-1.4
6,713,425	-				-0.4
6,713,425	-				-1.4
6,713,429	-				+0.4
6,713,429	-				-0.3
6,713,429	-				-1.2
6,713,429	-				+0.5
6,713,455	-				+0.6
6,713,472	+				+0.2
6,713,472	+				+0.6
6,713,472	+				+2.2
6,713,472	+				+2.2
6,713,472	+				+2.2
6,713,472	+				+0.6
6,713,473	-				+0.2
6,713,473	-				-0.4
6,713,473	-				-0.6
6,713,473	-				-1.0
6,713,473	-				+0.2
6,713,473	-				+2.6
6,713,473	-				+0.2
6,713,473	-				+0.2
6,713,473	-				-1.5
6,713,473	-				-0.2
6,713,473	-				-2.8
6,713,473	-				-1.0
6,713,482	+				-0.4
6,713,482	+				-1.0
6,713,483	-				+0.7
6,713,493	-				-0.8
6,713,493	-				+0.2
6,713,543	+				+2.9
6,713,551	-				+2.4
6,713,563	+				+2.3
6,713,564	-				-0.6
6,713,564	-				-1.3
6,713,564	-				-1.6
6,713,583	-				-1.2
6,713,583	-				-1.1
6,713,638	+				-1.2
6,713,694	+				+0.2
6,713,694	+				-1.4
6,713,695	-				+1.0
6,713,737	-				+0.8
6,713,737	-				+0.7
6,713,803	+				+1.8
6,713,832	+				-2.0
6,713,832	+				-0.1
6,713,833	-				-0.2
6,713,833	-				+0.3
6,713,833	-				-0.4
6,713,833	-				-0.3
6,713,833	-				-0.2
6,713,897	+				-0.8
6,713,897	+				-1.0
6,713,897	+				-0.4
6,713,897	+				-1.2
6,713,897	+				-0.6
6,713,897	+				+0.2
6,713,897	+				+0.5
6,713,897	+				+0.4
6,713,897	+				-0.4
6,713,897	+				-2.9
6,713,897	+				+2.0
6,713,897	+				-2.2
6,713,898	-				+0.4
6,713,898	-				-2.7
6,713,898	-				+3.2
6,713,898	-				+1.2
6,713,898	-				-1.0
6,713,898	-				-0.7
6,713,898	-				+1.5
6,713,898	-				-0.8
6,713,898	-				+0.6
6,713,898	-				+0.3
6,713,898	-				-1.2
6,713,898	-				-0.9
6,713,898	-				-1.2
6,713,898	-				-2.2
6,713,898	-				-1.0
6,713,898	-				-0.1
6,713,898	-				+2.6
6,713,922	+				-2.1
6,713,922	+				+0.2
6,713,923	-				-1.6
6,713,925	+				-0.3
6,713,926	-				+2.3
6,713,926	-				+1.9
6,713,928	+				-0.2
6,713,936	-				+1.6
6,713,961	+				-1.4
6,713,961	+				-1.7
6,713,961	+				-0.4
6,713,961	+				-1.2
6,713,961	+				+0.6
6,713,961	+				-0.6
6,713,961	+				-0.0
6,713,961	+				-1.8
6,713,961	+				+1.6
6,713,961	+				+0.2
6,713,961	+				-2.2
6,713,961	+				-1.9
6,713,961	+				+0.1
6,713,961	+				+1.4
6,713,961	+				+0.3
6,713,962	-				-0.8
6,713,962	-				-0.2
6,713,962	-				+0.2
6,713,962	-				+1.2
6,713,962	-				+0.8
6,713,962	-				+0.2
6,713,962	-				-0.9
6,714,001	+				-0.9
6,714,001	+				+0.8
6,714,001	+				-0.2
6,714,001	+				-0.7
6,714,001	+				-2.3
6,714,001	+				-0.4
6,714,001	+				+3.6
6,714,001	+				-1.0
6,714,001	+				+0.2
6,714,001	+				-0.2
6,714,002	-				-0.5
6,714,002	-				+0.2
6,714,002	-				-2.2
6,714,002	-				-0.8
6,714,002	-				-2.3
6,714,002	-				+1.0
6,714,002	-				-0.1
6,714,002	-				+1.2
6,714,042	+		PFLU_RS30180	0.16	-0.5
6,714,042	+		PFLU_RS30180	0.16	+1.2
6,714,042	+		PFLU_RS30180	0.16	+0.4
6,714,042	+		PFLU_RS30180	0.16	+1.4
6,714,043	-		PFLU_RS30180	0.16	+1.5
6,714,043	-		PFLU_RS30180	0.16	-0.3
6,714,043	-		PFLU_RS30180	0.16	+0.5
6,714,043	-		PFLU_RS30180	0.16	+0.4
6,714,043	-		PFLU_RS30180	0.16	+1.0
6,714,043	-		PFLU_RS30180	0.16	-0.5
6,714,043	-		PFLU_RS30180	0.16	-0.6
6,714,084	+		PFLU_RS30180	0.24	+0.7
6,714,084	+		PFLU_RS30180	0.24	-0.8
6,714,084	+		PFLU_RS30180	0.24	-0.4
6,714,084	+		PFLU_RS30180	0.24	+1.0
6,714,084	+		PFLU_RS30180	0.24	-0.7
6,714,085	-		PFLU_RS30180	0.24	-0.1
6,714,085	-		PFLU_RS30180	0.24	+0.9
6,714,142	+		PFLU_RS30180	0.36	+1.0
6,714,142	+		PFLU_RS30180	0.36	+0.9
6,714,143	-		PFLU_RS30180	0.36	+1.5
6,714,143	-		PFLU_RS30180	0.36	-0.4
6,714,143	-		PFLU_RS30180	0.36	+0.9
6,714,143	-		PFLU_RS30180	0.36	-2.1
6,714,143	-		PFLU_RS30180	0.36	+0.2
6,714,208	+		PFLU_RS30180	0.49	+0.6
6,714,208	+		PFLU_RS30180	0.49	-0.6
6,714,208	+		PFLU_RS30180	0.49	+2.5
6,714,208	+		PFLU_RS30180	0.49	+1.5
6,714,208	+		PFLU_RS30180	0.49	+1.4
6,714,208	+		PFLU_RS30180	0.49	+1.6
6,714,208	+		PFLU_RS30180	0.49	-0.3
6,714,208	+		PFLU_RS30180	0.49	+1.0
6,714,208	+		PFLU_RS30180	0.49	-0.4
6,714,208	+		PFLU_RS30180	0.49	-1.0
6,714,208	+		PFLU_RS30180	0.49	+4.3
6,714,208	+		PFLU_RS30180	0.49	-0.2
6,714,209	-		PFLU_RS30180	0.49	+1.0
6,714,209	-		PFLU_RS30180	0.49	+0.4
6,714,209	-		PFLU_RS30180	0.49	+0.4
6,714,209	-		PFLU_RS30180	0.49	+0.5
6,714,209	-		PFLU_RS30180	0.49	+2.2
6,714,209	-		PFLU_RS30180	0.49	-0.3
6,714,209	-		PFLU_RS30180	0.49	-1.2
6,714,209	-		PFLU_RS30180	0.49	-1.3
6,714,209	-		PFLU_RS30180	0.49	-0.2
6,714,261	+		PFLU_RS30180	0.59	-2.2
6,714,261	+		PFLU_RS30180	0.59	-0.1
6,714,261	+		PFLU_RS30180	0.59	-1.1
6,714,367	+		PFLU_RS30180	0.80	-0.4
6,714,367	+		PFLU_RS30180	0.80	+0.2
6,714,367	+		PFLU_RS30180	0.80	+0.7
6,714,367	+		PFLU_RS30180	0.80	-1.5
6,714,367	+		PFLU_RS30180	0.80	-1.2
6,714,367	+		PFLU_RS30180	0.80	+0.4
6,714,367	+		PFLU_RS30180	0.80	+0.4
6,714,367	+		PFLU_RS30180	0.80	-0.5
6,714,367	+		PFLU_RS30180	0.80	+0.6
6,714,368	-		PFLU_RS30180	0.80	-1.5
6,714,368	-		PFLU_RS30180	0.80	+0.2
6,714,368	-		PFLU_RS30180	0.80	-0.8
6,714,368	-		PFLU_RS30180	0.80	-3.5