Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28855

Experiment: L-Valine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine 10 mM (C)
6,416,458	+				-1.8
6,416,458	+				-0.4
6,416,458	+				+1.4
6,416,458	+				-2.7
6,416,458	+				+1.4
6,416,458	+				+0.4
6,416,458	+				+0.2
6,416,458	+				-1.8
6,416,458	+				+0.0
6,416,458	+				+0.6
6,416,458	+				+1.4
6,416,458	+				+0.2
6,416,458	+				-0.1
6,416,458	+				+1.2
6,416,459	-				+0.6
6,416,459	-				+1.2
6,416,459	-				-1.0
6,416,459	-				+0.2
6,416,459	-				-0.8
6,416,459	-				-1.1
6,416,459	-				-0.4
6,416,459	-				+0.2
6,416,459	-				+2.2
6,416,463	+				-1.8
6,416,463	+				-2.7
6,416,463	+				-1.4
6,416,463	+				-1.1
6,416,463	+				+0.2
6,416,464	-				-1.8
6,416,464	-				-0.1
6,416,464	-				-0.8
6,416,464	-				-0.6
6,416,518	+				+3.1
6,416,519	-				+3.6
6,416,549	+				-0.4
6,416,549	+				+0.6
6,416,549	+				-0.1
6,416,549	+				-0.1
6,416,549	+				-0.8
6,416,549	+				+1.0
6,416,549	+				-0.6
6,416,549	+				-1.3
6,416,549	+				+3.0
6,416,549	+				-1.3
6,416,549	+				-0.4
6,416,549	+				-0.4
6,416,549	+				-0.8
6,416,549	+				-0.4
6,416,549	+				-2.0
6,416,549	+				-1.1
6,416,549	+				-1.0
6,416,550	-				-0.4
6,416,550	-				-2.2
6,416,550	-				-1.7
6,416,550	-				+0.5
6,416,550	-				-1.6
6,416,550	-				+2.2
6,416,550	-				-1.4
6,416,550	-				-1.8
6,416,550	-				+0.6
6,416,550	-				+2.2
6,416,550	-				+0.2
6,416,577	-				-0.1
6,416,577	-				-0.6
6,416,577	-				-0.1
6,416,577	-				+2.2
6,416,583	+				+0.6
6,416,583	+				-0.8
6,416,583	+				+2.9
6,416,583	+				-0.4
6,416,584	-				+0.2
6,416,584	-				+0.2
6,416,584	-				+0.4
6,416,584	-				+0.7
6,416,584	-				-0.1
6,416,584	-				+0.7
6,416,584	-				+0.6
6,416,596	+				-1.5
6,416,597	-				-1.1
6,416,624	+				+1.3
6,416,625	-				+0.5
6,416,656	-				-1.7
6,416,669	+				-1.0
6,416,670	-				-0.2
6,416,670	-				-1.4
6,416,672	+				-0.6
6,416,672	+				-2.6
6,416,672	+				+0.2
6,416,672	+				-0.1
6,416,673	-				+1.1
6,416,673	-				-0.7
6,416,711	+				-0.1
6,416,711	+				+0.6
6,416,711	+				+1.4
6,416,712	-				-2.3
6,416,712	-				+0.6
6,416,712	-				-0.2
6,416,712	-				-0.8
6,416,725	+				-0.7
6,416,725	+				+2.6
6,416,771	+				+1.2
6,416,771	+				+1.2
6,416,771	+				+3.3
6,416,802	+				+0.7
6,416,802	+				-2.1
6,416,802	+				-0.3
6,416,819	+				-0.3
6,416,819	+				+1.9
6,416,819	+				+0.2
6,416,819	+				+0.7
6,416,824	-				+0.3
6,416,856	-				-1.1
6,416,864	+				+3.2
6,416,864	+				-0.3
6,416,885	+				-0.1
6,416,885	+				-1.4
6,416,885	+				+1.7
6,416,885	+				-1.2
6,416,885	+				+1.6
6,416,885	+				-0.1
6,416,885	+				+0.6
6,416,885	+				-1.8
6,416,885	+				-1.3
6,416,885	+				+0.6
6,416,885	+				-0.6
6,416,885	+				-0.6
6,416,885	+				-2.0
6,416,885	+				-1.1
6,416,885	+				+1.4
6,416,885	+				-1.3
6,416,885	+				+2.2
6,416,886	-				-0.6
6,416,886	-				-0.2
6,416,886	-				-1.0
6,416,886	-				-0.6
6,416,886	-				-1.1
6,416,886	-				+1.0
6,416,886	-				-1.1
6,416,886	-				+1.0
6,416,886	-				+0.1
6,416,886	-				+0.5
6,416,886	-				+0.9
6,416,886	-				-1.3
6,416,886	-				+1.8
6,416,886	-				-0.7
6,416,886	-				-2.5
6,416,886	-				-2.3
6,416,886	-				-0.3
6,416,886	-				+0.2
6,416,886	-				-0.1
6,416,886	-				+0.4
6,416,886	-				-1.7
6,416,886	-				-1.8
6,416,894	+				+0.2
6,416,894	+				+1.4
6,416,894	+				-0.6
6,416,894	+				+1.0
6,416,894	+				-1.9
6,416,894	+				-0.6
6,416,895	-				+0.2
6,416,895	-				-2.1
6,416,895	-				+0.9
6,416,895	-				-1.8
6,416,895	-				-0.5
6,416,895	-				-0.6
6,416,895	-				+0.6
6,416,895	-				+0.2
6,416,895	-				-0.4
6,416,895	-				-1.6
6,416,968	-		PFLU_RS31190	0.14	-1.4
6,417,011	-		PFLU_RS31190	0.26	-1.3
6,417,011	-		PFLU_RS31190	0.26	+0.2
6,417,011	-		PFLU_RS31190	0.26	+0.2
6,417,033	+		PFLU_RS31190	0.32	-1.9
6,417,034	-		PFLU_RS31190	0.32	-0.5
6,417,034	-		PFLU_RS31190	0.32	+1.3
6,417,051	+		PFLU_RS31190	0.37	-2.8
6,417,051	+		PFLU_RS31190	0.37	-0.8
6,417,051	+		PFLU_RS31190	0.37	-0.2
6,417,051	+		PFLU_RS31190	0.37	+0.8
6,417,051	+		PFLU_RS31190	0.37	+1.0
6,417,052	-		PFLU_RS31190	0.37	+0.6
6,417,052	-		PFLU_RS31190	0.37	-1.0
6,417,052	-		PFLU_RS31190	0.37	-0.5
6,417,052	-		PFLU_RS31190	0.37	+0.2
6,417,052	-		PFLU_RS31190	0.37	-2.2
6,417,054	+		PFLU_RS31190	0.37	-2.6
6,417,055	-		PFLU_RS31190	0.38	-1.2
6,417,055	-		PFLU_RS31190	0.38	-1.4
6,417,070	+		PFLU_RS31190	0.42	-0.2
6,417,070	+		PFLU_RS31190	0.42	+2.3
6,417,070	+		PFLU_RS31190	0.42	+2.0
6,417,070	+		PFLU_RS31190	0.42	+0.6
6,417,070	+		PFLU_RS31190	0.42	+3.6
6,417,070	+		PFLU_RS31190	0.42	-1.1
6,417,070	+		PFLU_RS31190	0.42	+0.8
6,417,070	+		PFLU_RS31190	0.42	+1.2
6,417,070	+		PFLU_RS31190	0.42	+0.1
6,417,071	-		PFLU_RS31190	0.42	+0.2
6,417,071	-		PFLU_RS31190	0.42	-0.0
6,417,071	-		PFLU_RS31190	0.42	-1.4
6,417,071	-		PFLU_RS31190	0.42	+0.0
6,417,071	-		PFLU_RS31190	0.42	-1.6
6,417,071	-		PFLU_RS31190	0.42	-0.1
6,417,071	-		PFLU_RS31190	0.42	+2.8
6,417,071	-		PFLU_RS31190	0.42	-0.6
6,417,071	-		PFLU_RS31190	0.42	+1.8
6,417,169	+		PFLU_RS31190	0.69	-1.3
6,417,170	-		PFLU_RS31190	0.69	-1.0
6,417,170	-		PFLU_RS31190	0.69	-0.6
6,417,269	-				-0.7
6,417,269	-				-1.0
6,417,269	-				-1.7
6,417,304	+				-0.5
6,417,325	+				+0.4
6,417,326	-				-0.0
6,417,326	-				-2.1
6,417,326	-				+1.4
6,417,326	-				+0.1
6,417,333	+				+0.2
6,417,458	-				-0.3
6,417,458	-				-1.0
6,418,773	-				-0.3
6,418,773	-				+2.9
6,418,776	-				-0.7
6,418,776	-				-1.0
6,418,776	-				+0.7
6,418,828	+				-1.1
6,418,868	+				+2.8
6,418,868	+				-1.4
6,418,868	+				-0.6
6,418,868	+				+0.9
6,418,868	+				+1.5
6,418,868	+				+0.0
6,418,868	+				+0.9
6,418,868	+				-1.0
6,418,868	+				+1.2
6,418,868	+				+1.0
6,418,868	+				+3.3
6,418,868	+				+3.9
6,418,868	+				+0.4
6,418,868	+				-2.0
6,418,868	+				-1.6
6,418,868	+				-1.6
6,418,868	+				+0.6
6,418,868	+				-1.2
6,418,868	+				-0.1
6,418,869	-				-0.4
6,418,869	-				-0.4
6,418,869	-				-0.6
6,418,869	-				-0.4
6,418,869	-				-1.3
6,418,869	-				+1.9
6,418,869	-				+0.2
6,418,869	-				+0.6
6,418,869	-				-1.8
6,418,869	-				+2.5
6,418,869	-				-0.7
6,418,869	-				+0.5
6,418,869	-				+4.6
6,418,869	-				+0.1
6,418,869	-				-2.0
6,418,869	-				-0.5
6,418,869	-				+1.2
6,418,869	-				+1.6
6,418,869	-				-2.7
6,418,869	-				-1.5
6,418,869	-				+2.0
6,418,869	-				+2.2
6,418,869	-				+1.8
6,418,869	-				-0.8
6,418,869	-				-1.1
6,418,869	-				+0.5
6,418,869	-				-1.4
6,418,869	-				-0.1
6,418,869	-				+2.3
6,418,869	-				+1.2
6,418,869	-				+0.6
6,418,869	-				+1.8
6,418,869	-				+3.1
6,418,869	-				+3.1
6,418,869	-				+2.5
6,418,869	-				+3.0
6,418,872	+				+0.2
6,418,872	+				-0.4
6,418,872	+				+2.0
6,418,872	+				-0.3
6,418,872	+				-0.4
6,418,872	+				-0.9
6,418,872	+				-0.4
6,418,872	+				-1.6
6,418,872	+				+0.9
6,418,873	-				+0.8
6,418,873	-				+1.3
6,418,873	-				-0.6
6,418,873	-				+1.4
6,418,873	-				-1.9
6,418,873	-				-0.3
6,418,873	-				+0.2
6,418,873	-				+0.2
6,418,873	-				+0.0
6,418,873	-				-2.1
6,418,873	-				+0.2
6,418,873	-				+0.2
6,418,873	-				+0.1
6,418,873	-				-1.3
6,418,873	-				+0.4
6,418,873	-				+1.1
6,418,873	-				+0.0
6,418,878	+				-0.1
6,418,878	+				+0.1
6,418,879	-				-1.9
6,418,890	-				-1.0
6,418,894	+				+0.7
6,418,894	+				+0.2
6,418,894	+				+0.9
6,418,894	+				+1.2
6,418,895	-				-0.2
6,418,895	-				+0.6
6,418,912	+				+1.4
6,418,912	+				-0.5
6,418,912	+				+2.2
6,418,912	+				-1.7
6,418,912	+				+3.9
6,418,912	+				-1.1
6,418,913	-				-1.0
6,418,913	-				-1.0
6,418,913	-				-1.0
6,418,913	-				+2.2
6,418,935	+				+1.1
6,418,935	+				-1.0
6,418,935	+				+5.1
6,418,935	+				+0.1
6,418,936	-				-2.6
6,418,936	-				+1.3
6,418,936	-				+0.6
6,418,936	-				-1.6
6,418,936	-				+0.2
6,418,946	+				-0.4
6,418,946	+				+0.3
6,418,946	+				+1.0
6,418,946	+				-0.4
6,418,946	+				-0.5
6,418,946	+				-0.5
6,418,946	+				+1.3
6,418,946	+				-1.3
6,418,946	+				+1.7
6,418,946	+				-1.1
6,418,947	-				-1.9
6,418,947	-				+2.4
6,418,947	-				+0.8
6,418,947	-				+0.3
6,418,947	-				+1.6
6,418,973	-				+1.2
6,418,973	-				-1.6
6,418,973	-				+1.0
6,419,047	+		PFLU_RS28860	0.13	-0.8
6,419,047	+		PFLU_RS28860	0.13	+2.3
6,419,047	+		PFLU_RS28860	0.13	+3.2
6,419,047	+		PFLU_RS28860	0.13	+0.9
6,419,047	+		PFLU_RS28860	0.13	-1.6
6,419,048	-		PFLU_RS28860	0.13	+0.2
6,419,070	+		PFLU_RS28860	0.15	+2.9
6,419,071	-		PFLU_RS28860	0.15	-0.9
6,419,170	+		PFLU_RS28860	0.24	+3.7
6,419,683	-		PFLU_RS28860	0.69	+0.3
6,419,736	+		PFLU_RS28860	0.73	-0.1
6,419,736	+		PFLU_RS28860	0.73	-1.7