Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27595

Experiment: L-Valine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine 10 mM (C)
6,138,382	+		PFLU_RS27585	0.43	-0.3
6,138,415	+		PFLU_RS27585	0.46	+0.7
6,138,415	+		PFLU_RS27585	0.46	-1.2
6,138,415	+		PFLU_RS27585	0.46	+1.6
6,138,415	+		PFLU_RS27585	0.46	-0.9
6,138,415	+		PFLU_RS27585	0.46	+0.3
6,138,415	+		PFLU_RS27585	0.46	-1.1
6,138,415	+		PFLU_RS27585	0.46	+0.3
6,138,415	+		PFLU_RS27585	0.46	+0.5
6,138,415	+		PFLU_RS27585	0.46	-1.7
6,138,416	-		PFLU_RS27585	0.46	-1.3
6,138,416	-		PFLU_RS27585	0.46	-0.7
6,138,416	-		PFLU_RS27585	0.46	-0.0
6,138,416	-		PFLU_RS27585	0.46	-0.9
6,138,416	-		PFLU_RS27585	0.46	-0.1
6,138,416	-		PFLU_RS27585	0.46	+0.3
6,138,416	-		PFLU_RS27585	0.46	+3.2
6,138,438	+		PFLU_RS27585	0.48	-0.3
6,138,438	+		PFLU_RS27585	0.48	+0.4
6,138,438	+		PFLU_RS27585	0.48	+0.3
6,138,439	-		PFLU_RS27585	0.48	-0.1
6,138,439	-		PFLU_RS27585	0.48	+0.1
6,138,439	-		PFLU_RS27585	0.48	-1.0
6,138,439	-		PFLU_RS27585	0.48	-1.3
6,138,461	+		PFLU_RS27585	0.50	-0.9
6,138,461	+		PFLU_RS27585	0.50	-0.1
6,138,461	+		PFLU_RS27585	0.50	-1.0
6,138,461	+		PFLU_RS27585	0.50	-1.5
6,138,461	+		PFLU_RS27585	0.50	-0.3
6,138,462	-		PFLU_RS27585	0.50	-0.3
6,138,462	-		PFLU_RS27585	0.50	+1.9
6,138,462	-		PFLU_RS27585	0.50	+3.6
6,138,462	-		PFLU_RS27585	0.50	+0.7
6,138,542	+		PFLU_RS27585	0.57	-0.3
6,138,603	-		PFLU_RS27585	0.62	-0.3
6,138,605	+		PFLU_RS27585	0.63	-0.9
6,138,605	+		PFLU_RS27585	0.63	+1.8
6,138,605	+		PFLU_RS27585	0.63	+3.5
6,138,605	+		PFLU_RS27585	0.63	-0.0
6,138,606	-		PFLU_RS27585	0.63	+1.0
6,138,606	-		PFLU_RS27585	0.63	-1.0
6,138,606	-		PFLU_RS27585	0.63	-1.4
6,138,606	-		PFLU_RS27585	0.63	+2.3
6,138,646	+		PFLU_RS27585	0.66	+1.0
6,138,647	-		PFLU_RS27585	0.66	-0.0
6,138,756	-		PFLU_RS27585	0.76	-0.7
6,139,052	+		PFLU_RS31180	0.12	-0.4
6,139,052	+		PFLU_RS31180	0.12	+0.4
6,139,052	+		PFLU_RS31180	0.12	+1.3
6,139,052	+		PFLU_RS31180	0.12	-0.3
6,139,052	+		PFLU_RS31180	0.12	-2.6
6,139,052	+		PFLU_RS31180	0.12	-0.7
6,139,052	+		PFLU_RS31180	0.12	-1.1
6,139,052	+		PFLU_RS31180	0.12	-0.9
6,139,052	+		PFLU_RS31180	0.12	-1.1
6,139,052	+		PFLU_RS31180	0.12	+2.1
6,139,053	-		PFLU_RS31180	0.13	-0.3
6,139,053	-		PFLU_RS31180	0.13	-0.2
6,139,053	-		PFLU_RS31180	0.13	-1.0
6,139,053	-		PFLU_RS31180	0.13	-2.2
6,139,053	-		PFLU_RS31180	0.13	-2.3
6,139,053	-		PFLU_RS31180	0.13	-2.8
6,139,079	+		PFLU_RS31180	0.29	+0.5
6,139,079	+		PFLU_RS31180	0.29	-0.3
6,139,080	-		PFLU_RS31180	0.30	-2.0
6,139,080	-		PFLU_RS31180	0.30	+0.2
6,139,101	+		PFLU_RS31180	0.43	-0.9
6,139,102	-		PFLU_RS31180	0.43	-1.5
6,139,176	+				-1.1
6,139,176	+				+0.3
6,139,177	-				-1.9
6,139,177	-				-0.3
6,139,228	+				+0.5
6,139,228	+				-0.5
6,139,228	+				-1.6
6,139,228	+				+0.3
6,139,229	-				+0.5
6,139,229	-				+0.4
6,139,229	-				-2.4
6,139,229	-				+0.5
6,139,229	-				+0.1
6,139,229	-				+0.7
6,139,229	-				+1.0
6,139,229	-				+0.5
6,139,229	-				+1.3
6,139,229	-				+2.0
6,139,229	-				-0.7
6,139,229	-				+1.3
6,139,229	-				+1.3
6,139,229	-				-0.5
6,139,229	-				-0.0
6,139,232	+				-2.3
6,139,232	+				-0.3
6,139,232	+				-0.2
6,139,232	+				+0.3
6,139,233	-				+0.7
6,139,233	-				+0.7
6,139,233	-				-1.0
6,139,294	+				-0.6
6,139,294	+				+1.3
6,139,294	+				-0.5
6,139,294	+				+0.7
6,139,295	-				-0.3
6,139,295	-				+0.3
6,139,295	-				+0.3
6,139,295	-				-0.9
6,139,347	+				-0.7
6,139,347	+				+1.1
6,139,347	+				-0.7
6,139,348	-				+0.5
6,139,348	-				+2.0
6,139,370	+				-0.0
6,139,371	-				+1.3
6,139,378	+				+1.8
6,139,378	+				+0.7
6,139,378	+				-0.6
6,139,379	-				+1.1
6,139,525	-		PFLU_RS27595	0.12	-0.9
6,139,555	-		PFLU_RS27595	0.14	+1.9
6,139,555	-		PFLU_RS27595	0.14	+0.9
6,139,666	+		PFLU_RS27595	0.23	+3.1
6,139,666	+		PFLU_RS27595	0.23	-0.5
6,139,666	+		PFLU_RS27595	0.23	-1.5
6,139,667	-		PFLU_RS27595	0.23	-0.6
6,139,702	+		PFLU_RS27595	0.26	-2.5
6,139,702	+		PFLU_RS27595	0.26	+0.2
6,139,702	+		PFLU_RS27595	0.26	+0.5
6,139,703	-		PFLU_RS27595	0.26	-0.6
6,139,703	-		PFLU_RS27595	0.26	+0.4
6,139,703	-		PFLU_RS27595	0.26	+0.3
6,139,703	-		PFLU_RS27595	0.26	+0.4
6,139,716	-		PFLU_RS27595	0.27	+0.7
6,139,722	+		PFLU_RS27595	0.27	+2.7
6,139,722	+		PFLU_RS27595	0.27	-1.9
6,139,722	+		PFLU_RS27595	0.27	+1.5
6,139,875	+		PFLU_RS27595	0.39	+0.9
6,139,875	+		PFLU_RS27595	0.39	-2.2
6,139,875	+		PFLU_RS27595	0.39	-0.5
6,139,875	+		PFLU_RS27595	0.39	+0.3
6,139,875	+		PFLU_RS27595	0.39	-0.0
6,139,875	+		PFLU_RS27595	0.39	-1.8
6,139,876	-		PFLU_RS27595	0.39	-0.5
6,139,876	-		PFLU_RS27595	0.39	+0.2
6,139,876	-		PFLU_RS27595	0.39	+1.5
6,139,876	-		PFLU_RS27595	0.39	+0.5
6,139,876	-		PFLU_RS27595	0.39	-0.3
6,139,882	+		PFLU_RS27595	0.40	-0.7
6,139,883	-		PFLU_RS27595	0.40	-1.7
6,139,917	+		PFLU_RS27595	0.43	-0.2
6,139,917	+		PFLU_RS27595	0.43	-0.8
6,139,917	+		PFLU_RS27595	0.43	-1.7
6,139,918	-		PFLU_RS27595	0.43	+1.3
6,139,918	-		PFLU_RS27595	0.43	-0.0
6,139,918	-		PFLU_RS27595	0.43	+2.7
6,139,990	+		PFLU_RS27595	0.48	+0.2
6,139,990	+		PFLU_RS27595	0.48	-0.7
6,139,990	+		PFLU_RS27595	0.48	+1.1
6,139,990	+		PFLU_RS27595	0.48	+1.1
6,139,991	-		PFLU_RS27595	0.48	-0.1
6,139,991	-		PFLU_RS27595	0.48	-0.2
6,139,991	-		PFLU_RS27595	0.48	-0.3
6,139,991	-		PFLU_RS27595	0.48	-0.0
6,139,991	-		PFLU_RS27595	0.48	-0.9
6,139,991	-		PFLU_RS27595	0.48	-0.7
6,139,991	-		PFLU_RS27595	0.48	-1.4
6,139,991	-		PFLU_RS27595	0.48	-0.5
6,139,991	-		PFLU_RS27595	0.48	+0.1
6,140,010	+		PFLU_RS27595	0.50	-2.3
6,140,299	+		PFLU_RS27595	0.73	-0.5
6,140,299	+		PFLU_RS27595	0.73	-2.0
6,140,300	-		PFLU_RS27595	0.73	+0.1
6,140,300	-		PFLU_RS27595	0.73	-1.9
6,140,300	-		PFLU_RS27595	0.73	-0.4
6,140,300	-		PFLU_RS27595	0.73	+1.9
6,140,300	-		PFLU_RS27595	0.73	+0.6
6,140,361	-		PFLU_RS27595	0.78	-0.5
6,140,421	+		PFLU_RS27595	0.82	-0.4
6,140,421	+		PFLU_RS27595	0.82	+1.0
6,140,526	+				+2.0
6,140,526	+				+1.0
6,140,526	+				-1.7
6,140,526	+				-0.3
6,140,527	-				+2.2
6,140,527	-				-2.0
6,140,527	-				+2.0
6,140,527	-				-0.9
6,140,527	-				-1.1
6,140,527	-				-1.1
6,140,527	-				-0.9
6,140,527	-				+0.4
6,140,527	-				-1.4
6,140,527	-				-0.4
6,140,527	-				+1.6
6,140,527	-				-2.1
6,140,630	+				-1.1
6,140,630	+				-1.3
6,140,630	+				+1.6
6,140,631	-				+0.3
6,140,631	-				+0.2
6,140,691	+				-1.6
6,140,691	+				+3.5
6,140,691	+				-1.9
6,140,692	-				+0.7
6,140,692	-				-0.9
6,140,720	+				-1.3
6,140,720	+				+1.5
6,140,720	+				+0.6
6,140,720	+				-0.9
6,140,720	+				-1.0
6,140,721	-				-1.4
6,140,721	-				+0.3
6,140,721	-				-1.8
6,140,721	-				+0.7
6,140,721	-				-1.3
6,140,724	+				-1.7
6,140,724	+				+2.0
6,140,724	+				-0.9
6,140,725	-				+1.3
6,140,725	-				+0.1
6,140,725	-				-0.1
6,140,725	-				+2.3
6,140,725	-				+2.0
6,140,739	+				-0.7
6,140,739	+				+0.9
6,140,739	+				+1.0
6,140,740	-				-1.9
6,140,740	-				-0.9
6,140,740	-				-1.6
6,140,770	+				-0.6
6,140,771	-				-1.3
6,140,783	+				-0.9
6,140,783	+				+0.9
6,140,790	+				+0.7
6,140,795	+				-0.0
6,140,795	+				+0.4
6,140,847	+				-0.0
6,140,847	+				+3.3
6,140,847	+				-0.9
6,140,848	-				-0.2
6,140,848	-				+0.4
6,140,848	-				-0.7
6,140,848	-				+4.0
6,140,848	-				+0.9
6,140,876	+				-0.3
6,140,877	-				+3.1
6,140,891	+				+1.8
6,140,891	+				-0.9
6,140,891	+				+2.1
6,140,891	+				-1.0
6,140,892	-				+0.8
6,140,892	-				+0.3
6,140,892	-				+2.3
6,140,892	-				+3.6
6,140,907	+				+1.7
6,140,907	+				-0.1
6,140,907	+				+0.7
6,140,907	+				+2.1
6,140,907	+				+0.4
6,140,907	+				-0.8
6,140,907	+				-0.3
6,140,907	+				-1.8
6,140,907	+				-1.5
6,140,908	-				-2.6
6,140,908	-				-0.0
6,140,908	-				+1.3
6,140,908	-				+1.8
6,140,908	-				-1.6
6,140,994	+		PFLU_RS27600	0.15	-1.4
6,140,994	+		PFLU_RS27600	0.15	-0.3
6,140,994	+		PFLU_RS27600	0.15	-1.3
6,140,994	+		PFLU_RS27600	0.15	-0.3
6,140,995	-		PFLU_RS27600	0.16	+0.3
6,141,040	+		PFLU_RS27600	0.21	+1.7
6,141,040	+		PFLU_RS27600	0.21	+0.8
6,141,040	+		PFLU_RS27600	0.21	+1.3
6,141,040	+		PFLU_RS27600	0.21	-2.3
6,141,040	+		PFLU_RS27600	0.21	-1.5
6,141,040	+		PFLU_RS27600	0.21	-2.6
6,141,040	+		PFLU_RS27600	0.21	-1.9
6,141,041	-		PFLU_RS27600	0.21	+2.7
6,141,041	-		PFLU_RS27600	0.21	+1.6
6,141,041	-		PFLU_RS27600	0.21	+0.8
6,141,041	-		PFLU_RS27600	0.21	-0.6
6,141,041	-		PFLU_RS27600	0.21	-0.6
6,141,041	-		PFLU_RS27600	0.21	+0.7
6,141,047	+		PFLU_RS27600	0.21	-0.6
6,141,047	+		PFLU_RS27600	0.21	-1.7
6,141,047	+		PFLU_RS27600	0.21	-0.9
6,141,047	+		PFLU_RS27600	0.21	-0.1
6,141,047	+		PFLU_RS27600	0.21	-0.5
6,141,048	-		PFLU_RS27600	0.21	+0.1
6,141,048	-		PFLU_RS27600	0.21	-0.9
6,141,048	-		PFLU_RS27600	0.21	-0.6
6,141,048	-		PFLU_RS27600	0.21	-2.5
6,141,048	-		PFLU_RS27600	0.21	-0.6
6,141,227	+		PFLU_RS27600	0.41	-0.1
6,141,227	+		PFLU_RS27600	0.41	+0.6
6,141,227	+		PFLU_RS27600	0.41	+0.2
6,141,228	-		PFLU_RS27600	0.41	+0.6
6,141,293	+		PFLU_RS27600	0.49	+0.2
6,141,293	+		PFLU_RS27600	0.49	-0.9
6,141,293	+		PFLU_RS27600	0.49	-1.3
6,141,293	+		PFLU_RS27600	0.49	+1.2
6,141,293	+		PFLU_RS27600	0.49	-0.8
6,141,294	-		PFLU_RS27600	0.49	-1.1
6,141,335	+		PFLU_RS27600	0.53	-1.2
6,141,335	+		PFLU_RS27600	0.53	+1.3
6,141,335	+		PFLU_RS27600	0.53	+0.5
6,141,335	+		PFLU_RS27600	0.53	+2.3
6,141,335	+		PFLU_RS27600	0.53	+2.9
6,141,335	+		PFLU_RS27600	0.53	-0.3
6,141,335	+		PFLU_RS27600	0.53	-0.7
6,141,335	+		PFLU_RS27600	0.53	-0.9
6,141,335	+		PFLU_RS27600	0.53	+0.9
6,141,335	+		PFLU_RS27600	0.53	+0.6
6,141,335	+		PFLU_RS27600	0.53	-1.1
6,141,335	+		PFLU_RS27600	0.53	+2.6
6,141,336	-		PFLU_RS27600	0.53	-1.4
6,141,336	-		PFLU_RS27600	0.53	+0.6
6,141,336	-		PFLU_RS27600	0.53	-0.7
6,141,336	-		PFLU_RS27600	0.53	+0.7
6,141,336	-		PFLU_RS27600	0.53	+2.3
6,141,336	-		PFLU_RS27600	0.53	+2.0
6,141,336	-		PFLU_RS27600	0.53	-0.9
6,141,336	-		PFLU_RS27600	0.53	+0.1
6,141,336	-		PFLU_RS27600	0.53	+0.1
6,141,336	-		PFLU_RS27600	0.53	-1.1
6,141,336	-		PFLU_RS27600	0.53	-1.6
6,141,336	-		PFLU_RS27600	0.53	+1.3
6,141,520	+		PFLU_RS27600	0.74	-0.9
6,141,520	+		PFLU_RS27600	0.74	-0.9
6,141,520	+		PFLU_RS27600	0.74	-1.8
6,141,521	-		PFLU_RS27600	0.74	+1.3
6,141,521	-		PFLU_RS27600	0.74	+0.8
6,141,602	-		PFLU_RS27600	0.83	-0.3