Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS23435

Experiment: L-Valine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine 10 mM (C)
5,262,992	+				-1.5
5,263,003	+				+1.1
5,263,004	-				-1.1
5,263,005	+				+0.1
5,263,010	+				-0.9
5,263,025	-				+1.4
5,263,025	-				-0.7
5,263,057	+				+0.1
5,263,058	-				+0.2
5,263,071	+				-1.2
5,263,071	+				+1.1
5,263,071	+				-0.6
5,263,234	+		PFLU_RS23430	0.21	+0.5
5,263,234	+		PFLU_RS23430	0.21	-1.2
5,263,234	+		PFLU_RS23430	0.21	+3.8
5,263,234	+		PFLU_RS23430	0.21	-1.6
5,263,234	+		PFLU_RS23430	0.21	-0.5
5,263,234	+		PFLU_RS23430	0.21	-0.1
5,263,234	+		PFLU_RS23430	0.21	+2.7
5,263,235	-		PFLU_RS23430	0.22	-2.0
5,263,235	-		PFLU_RS23430	0.22	-0.3
5,263,235	-		PFLU_RS23430	0.22	-0.7
5,263,235	-		PFLU_RS23430	0.22	-1.4
5,263,235	-		PFLU_RS23430	0.22	+1.4
5,263,241	+		PFLU_RS23430	0.22	+0.2
5,263,241	+		PFLU_RS23430	0.22	-0.7
5,263,241	+		PFLU_RS23430	0.22	-0.4
5,263,242	-		PFLU_RS23430	0.23	-0.2
5,263,242	-		PFLU_RS23430	0.23	+0.8
5,263,328	+		PFLU_RS23430	0.36	-0.1
5,263,504	+		PFLU_RS23430	0.64	-1.7
5,263,618	+		PFLU_RS23430	0.83	-0.9
5,263,619	-		PFLU_RS23430	0.83	+0.7
5,263,619	-		PFLU_RS23430	0.83	-0.7
5,263,619	-		PFLU_RS23430	0.83	-0.9
5,263,619	-		PFLU_RS23430	0.83	-2.0
5,263,662	+		PFLU_RS23430	0.90	-1.1
5,263,663	-		PFLU_RS23430	0.90	-1.0
5,263,663	-		PFLU_RS23430	0.90	-0.2
5,263,663	-		PFLU_RS23430	0.90	-0.6
5,263,725	-				+0.5
5,263,725	-				-0.7
5,263,811	+				+0.3
5,263,811	+				+0.9
5,263,811	+				-0.7
5,263,812	-				+0.2
5,263,812	-				-2.3
5,263,825	+				-2.0
5,263,825	+				+1.1
5,263,826	-				+2.4
5,263,835	+				+1.1
5,263,836	-				-0.5
5,263,888	-				-0.9
5,263,888	-				-1.9
5,263,888	-				+0.2
5,263,888	-				-1.4
5,263,959	+				-0.2
5,263,959	+				-1.4
5,263,959	+				+0.9
5,263,959	+				+0.2
5,263,959	+				-1.0
5,263,959	+				-2.4
5,263,960	-				+0.5
5,263,960	-				-2.2
5,263,960	-				+1.2
5,263,960	-				-0.5
5,263,963	+				-0.5
5,263,963	+				+1.0
5,263,963	+				+0.1
5,263,963	+				+0.3
5,263,963	+				-0.6
5,263,963	+				-2.1
5,263,963	+				-1.7
5,263,963	+				-0.2
5,263,963	+				-0.2
5,263,963	+				-1.7
5,263,964	-				+1.1
5,263,964	-				-0.5
5,263,964	-				+0.2
5,263,998	+				-1.1
5,263,998	+				-0.4
5,263,998	+				+0.1
5,263,998	+				+0.5
5,263,998	+				+2.5
5,263,999	-				-0.6
5,263,999	-				-0.5
5,263,999	-				+1.3
5,263,999	-				-1.1
5,263,999	-				-2.4
5,263,999	-				+0.9
5,264,009	+				-0.9
5,264,010	-				-1.1
5,264,021	-				+0.1
5,264,057	+		PFLU_RS23435	0.13	+0.9
5,264,057	+		PFLU_RS23435	0.13	-0.1
5,264,058	-		PFLU_RS23435	0.13	+0.1
5,264,058	-		PFLU_RS23435	0.13	-0.7
5,264,093	-		PFLU_RS23435	0.17	-2.2
5,264,093	-		PFLU_RS23435	0.17	-1.7
5,264,093	-		PFLU_RS23435	0.17	+0.1
5,264,116	+		PFLU_RS23435	0.19	+0.2
5,264,116	+		PFLU_RS23435	0.19	+0.7
5,264,116	+		PFLU_RS23435	0.19	-0.6
5,264,116	+		PFLU_RS23435	0.19	-0.8
5,264,116	+		PFLU_RS23435	0.19	-1.4
5,264,116	+		PFLU_RS23435	0.19	-0.8
5,264,116	+		PFLU_RS23435	0.19	-0.1
5,264,117	-		PFLU_RS23435	0.19	+1.1
5,264,117	-		PFLU_RS23435	0.19	-1.3
5,264,117	-		PFLU_RS23435	0.19	+0.3
5,264,117	-		PFLU_RS23435	0.19	+0.6
5,264,117	-		PFLU_RS23435	0.19	+0.6
5,264,122	+		PFLU_RS23435	0.19	+0.5
5,264,122	+		PFLU_RS23435	0.19	-0.5
5,264,123	-		PFLU_RS23435	0.19	+0.7
5,264,123	-		PFLU_RS23435	0.19	+0.3
5,264,123	-		PFLU_RS23435	0.19	-2.1
5,264,149	+		PFLU_RS23435	0.22	-2.3
5,264,149	+		PFLU_RS23435	0.22	+1.2
5,264,149	+		PFLU_RS23435	0.22	-2.1
5,264,149	+		PFLU_RS23435	0.22	-1.8
5,264,149	+		PFLU_RS23435	0.22	+3.9
5,264,149	+		PFLU_RS23435	0.22	+0.6
5,264,149	+		PFLU_RS23435	0.22	+1.7
5,264,149	+		PFLU_RS23435	0.22	+1.3
5,264,149	+		PFLU_RS23435	0.22	+1.8
5,264,149	+		PFLU_RS23435	0.22	+0.1
5,264,149	+		PFLU_RS23435	0.22	+0.4
5,264,150	-		PFLU_RS23435	0.22	-0.2
5,264,150	-		PFLU_RS23435	0.22	-0.5
5,264,150	-		PFLU_RS23435	0.22	-1.6
5,264,150	-		PFLU_RS23435	0.22	+0.9
5,264,193	+		PFLU_RS23435	0.26	-0.2
5,264,193	+		PFLU_RS23435	0.26	+1.1
5,264,193	+		PFLU_RS23435	0.26	-1.5
5,264,194	-		PFLU_RS23435	0.26	+0.1
5,264,194	-		PFLU_RS23435	0.26	+3.3
5,264,256	+		PFLU_RS23435	0.32	-0.4
5,264,256	+		PFLU_RS23435	0.32	+2.0
5,264,257	-		PFLU_RS23435	0.32	-0.5
5,264,257	-		PFLU_RS23435	0.32	-0.7
5,264,270	+		PFLU_RS23435	0.33	+0.8
5,264,271	-		PFLU_RS23435	0.33	+2.5
5,264,292	-		PFLU_RS23435	0.35	+1.1
5,264,292	-		PFLU_RS23435	0.35	-0.9
5,264,292	-		PFLU_RS23435	0.35	+1.8
5,264,292	-		PFLU_RS23435	0.35	-0.5
5,264,292	-		PFLU_RS23435	0.35	-0.3
5,264,362	+		PFLU_RS23435	0.42	+0.4
5,264,389	+		PFLU_RS23435	0.44	+0.5
5,264,390	-		PFLU_RS23435	0.45	+1.3
5,264,390	-		PFLU_RS23435	0.45	-1.0
5,264,390	-		PFLU_RS23435	0.45	-1.1
5,264,416	+		PFLU_RS23435	0.47	-0.4
5,264,416	+		PFLU_RS23435	0.47	+2.9
5,264,416	+		PFLU_RS23435	0.47	-0.5
5,264,417	-		PFLU_RS23435	0.47	-0.5
5,264,622	+		PFLU_RS23435	0.66	-0.9
5,264,622	+		PFLU_RS23435	0.66	-1.5
5,264,640	-		PFLU_RS23435	0.68	+0.4
5,264,651	+		PFLU_RS23435	0.69	+1.8
5,264,651	+		PFLU_RS23435	0.69	+0.4
5,264,651	+		PFLU_RS23435	0.69	+0.2
5,264,651	+		PFLU_RS23435	0.69	+0.5
5,264,651	+		PFLU_RS23435	0.69	+1.4
5,264,651	+		PFLU_RS23435	0.69	-0.5
5,264,651	+		PFLU_RS23435	0.69	-0.5
5,264,651	+		PFLU_RS23435	0.69	-0.2
5,264,651	+		PFLU_RS23435	0.69	+0.5
5,264,651	+		PFLU_RS23435	0.69	+1.3
5,264,651	+		PFLU_RS23435	0.69	-1.1
5,264,651	+		PFLU_RS23435	0.69	-0.1
5,264,651	+		PFLU_RS23435	0.69	+2.0
5,264,651	+		PFLU_RS23435	0.69	-0.0
5,264,651	+		PFLU_RS23435	0.69	+0.0
5,264,651	+		PFLU_RS23435	0.69	-0.8
5,264,652	-		PFLU_RS23435	0.69	+2.1
5,264,652	-		PFLU_RS23435	0.69	+0.3
5,264,652	-		PFLU_RS23435	0.69	+0.5
5,264,652	-		PFLU_RS23435	0.69	+0.3
5,264,652	-		PFLU_RS23435	0.69	-0.8
5,264,652	-		PFLU_RS23435	0.69	+1.8
5,264,652	-		PFLU_RS23435	0.69	-1.1
5,264,652	-		PFLU_RS23435	0.69	+1.3
5,264,652	-		PFLU_RS23435	0.69	-1.8
5,264,652	-		PFLU_RS23435	0.69	-1.1
5,264,794	+		PFLU_RS23435	0.83	+4.9
5,264,795	-		PFLU_RS23435	0.83	+1.4
5,264,865	+		PFLU_RS23435	0.89	+0.5
5,264,866	-		PFLU_RS23435	0.90	+2.1
5,264,908	+				+1.2
5,264,908	+				-0.8
5,264,908	+				-2.1
5,264,908	+				+0.1
5,264,908	+				-0.8
5,264,909	-				-0.2
5,264,909	-				-0.4
5,264,909	-				-0.2
5,264,909	-				-0.5
5,264,909	-				+0.1
5,264,909	-				+0.1
5,264,909	-				-0.7
5,264,909	-				-1.1
5,264,909	-				+1.3
5,264,909	-				-0.4
5,264,909	-				-0.2
5,264,945	+				-2.0
5,264,945	+				+3.8
5,264,945	+				-2.5
5,264,945	+				-0.7
5,264,945	+				-0.1
5,264,945	+				+1.1
5,264,945	+				+0.4
5,264,946	-				+2.1
5,264,946	-				-0.2
5,264,946	-				+2.6
5,264,946	-				-0.5
5,264,946	-				+1.4
5,264,946	-				-2.7
5,264,946	-				+0.2
5,264,946	-				+0.5
5,264,946	-				+2.1
5,264,946	-				+0.5
5,264,946	-				+2.4
5,264,946	-				+1.3
5,264,946	-				+1.5
5,264,965	+				-0.6
5,264,965	+				+0.7
5,265,003	+				+1.2
5,265,003	+				+1.5
5,265,004	-				+0.6
5,265,004	-				+0.0
5,265,032	+				+1.1
5,265,032	+				-0.1
5,265,032	+				-1.4
5,265,033	-				+2.1
5,265,033	-				+0.9
5,265,033	-				-0.2
5,265,167	+				+0.3
5,265,168	-				-1.2
5,265,168	-				-2.1
5,265,174	+				-0.7
5,265,174	+				-1.1
5,265,174	+				-2.4
5,265,174	+				-1.1
5,265,174	+				+0.9
5,265,174	+				-0.5
5,265,174	+				-1.4
5,265,174	+				+1.4
5,265,175	-				-0.7
5,265,175	-				-0.4
5,265,175	-				-2.3
5,265,175	-				+1.5
5,265,175	-				-0.8
5,265,175	-				-0.9
5,265,175	-				-0.8
5,265,175	-				+0.2
5,265,182	-				+1.7
5,265,197	+				-0.9
5,265,197	+				-1.0
5,265,244	+				-2.1
5,265,244	+				-0.9
5,265,244	+				-1.5
5,265,244	+				+5.8
5,265,245	-				-0.5
5,265,245	-				-2.9
5,265,258	-				+1.8
5,265,402	+		PFLU_RS23440	0.12	-0.6
5,265,402	+		PFLU_RS23440	0.12	-1.0
5,265,402	+		PFLU_RS23440	0.12	-0.9
5,265,402	+		PFLU_RS23440	0.12	-1.1
5,265,403	-		PFLU_RS23440	0.12	+1.1
5,265,474	+		PFLU_RS23440	0.18	+3.9
5,265,474	+		PFLU_RS23440	0.18	-1.4
5,265,475	-		PFLU_RS23440	0.18	+0.2
5,265,475	-		PFLU_RS23440	0.18	+0.2
5,265,475	-		PFLU_RS23440	0.18	-0.3
5,265,573	+		PFLU_RS23440	0.25	-1.4
5,265,573	+		PFLU_RS23440	0.25	+1.1
5,265,573	+		PFLU_RS23440	0.25	-0.4
5,265,573	+		PFLU_RS23440	0.25	-0.2
5,265,573	+		PFLU_RS23440	0.25	-0.2
5,265,573	+		PFLU_RS23440	0.25	+1.1
5,265,573	+		PFLU_RS23440	0.25	+0.3
5,265,573	+		PFLU_RS23440	0.25	+1.4
5,265,573	+		PFLU_RS23440	0.25	-0.8
5,265,573	+		PFLU_RS23440	0.25	+4.1
5,265,573	+		PFLU_RS23440	0.25	-1.2
5,265,573	+		PFLU_RS23440	0.25	+1.6
5,265,573	+		PFLU_RS23440	0.25	-0.7
5,265,573	+		PFLU_RS23440	0.25	+2.6
5,265,573	+		PFLU_RS23440	0.25	-0.5
5,265,573	+		PFLU_RS23440	0.25	+2.1
5,265,574	-		PFLU_RS23440	0.25	-0.1
5,265,574	-		PFLU_RS23440	0.25	+2.1
5,265,574	-		PFLU_RS23440	0.25	+1.0
5,265,574	-		PFLU_RS23440	0.25	-0.2
5,265,574	-		PFLU_RS23440	0.25	+0.2
5,265,574	-		PFLU_RS23440	0.25	+1.0
5,265,574	-		PFLU_RS23440	0.25	-1.2
5,265,574	-		PFLU_RS23440	0.25	-1.5
5,265,574	-		PFLU_RS23440	0.25	-0.5
5,265,574	-		PFLU_RS23440	0.25	-1.7
5,265,607	+		PFLU_RS23440	0.28	+1.1
5,265,607	+		PFLU_RS23440	0.28	+0.2
5,265,607	+		PFLU_RS23440	0.28	-0.7
5,265,607	+		PFLU_RS23440	0.28	+2.0
5,265,607	+		PFLU_RS23440	0.28	+0.6
5,265,607	+		PFLU_RS23440	0.28	-0.3
5,265,607	+		PFLU_RS23440	0.28	-0.1
5,265,607	+		PFLU_RS23440	0.28	-2.4
5,265,607	+		PFLU_RS23440	0.28	+0.8
5,265,608	-		PFLU_RS23440	0.28	-1.7
5,265,608	-		PFLU_RS23440	0.28	-0.9
5,265,608	-		PFLU_RS23440	0.28	-0.7
5,265,608	-		PFLU_RS23440	0.28	+0.5
5,265,621	+		PFLU_RS23440	0.29	-0.4
5,265,621	+		PFLU_RS23440	0.29	-2.1
5,265,621	+		PFLU_RS23440	0.29	-2.4
5,265,622	-		PFLU_RS23440	0.29	-0.1
5,265,622	-		PFLU_RS23440	0.29	-0.9
5,265,622	-		PFLU_RS23440	0.29	-0.2
5,265,768	+		PFLU_RS23440	0.40	-1.4
5,265,768	+		PFLU_RS23440	0.40	+0.1
5,265,769	-		PFLU_RS23440	0.40	-1.4
5,265,769	-		PFLU_RS23440	0.40	-1.8
5,265,840	+		PFLU_RS23440	0.45	+0.6
5,265,840	+		PFLU_RS23440	0.45	+0.6
5,265,840	+		PFLU_RS23440	0.45	+2.5
5,265,905	+		PFLU_RS23440	0.50	-0.7
5,265,939	+		PFLU_RS23440	0.53	-0.7
5,265,939	+		PFLU_RS23440	0.53	+0.8
5,265,939	+		PFLU_RS23440	0.53	-0.6
5,265,939	+		PFLU_RS23440	0.53	+1.2
5,265,939	+		PFLU_RS23440	0.53	+0.5
5,265,939	+		PFLU_RS23440	0.53	-1.4
5,265,939	+		PFLU_RS23440	0.53	+0.4
5,265,939	+		PFLU_RS23440	0.53	-1.6
5,265,940	-		PFLU_RS23440	0.53	-1.5
5,265,940	-		PFLU_RS23440	0.53	-1.2
5,265,940	-		PFLU_RS23440	0.53	+0.8
5,265,940	-		PFLU_RS23440	0.53	+1.3
5,265,940	-		PFLU_RS23440	0.53	-1.4
5,265,940	-		PFLU_RS23440	0.53	+0.4
5,265,940	-		PFLU_RS23440	0.53	-1.5
5,265,940	-		PFLU_RS23440	0.53	+2.7
5,265,940	-		PFLU_RS23440	0.53	-0.4
5,265,940	-		PFLU_RS23440	0.53	+2.3
5,265,940	-		PFLU_RS23440	0.53	-0.5
5,265,940	-		PFLU_RS23440	0.53	-0.9
5,265,940	-		PFLU_RS23440	0.53	+0.4
5,265,940	-		PFLU_RS23440	0.53	+0.4
5,265,951	+		PFLU_RS23440	0.54	-1.0
5,265,951	+		PFLU_RS23440	0.54	-1.2
5,265,951	+		PFLU_RS23440	0.54	-0.7
5,265,951	+		PFLU_RS23440	0.54	+1.7
5,265,952	-		PFLU_RS23440	0.54	-2.8
5,265,952	-		PFLU_RS23440	0.54	-1.2