Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22935

Experiment: L-Ornithine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Ornithine 10 mM (C)
5,157,865	+				-2.0
5,157,875	+				+0.4
5,157,876	-				-0.4
5,157,952	+		PFLU_RS22930	0.18	-1.6
5,157,952	+		PFLU_RS22930	0.18	+1.7
5,157,952	+		PFLU_RS22930	0.18	+1.0
5,157,953	-		PFLU_RS22930	0.18	-1.3
5,158,057	+		PFLU_RS22930	0.30	+1.3
5,158,057	+		PFLU_RS22930	0.30	-1.1
5,158,057	+		PFLU_RS22930	0.30	+2.6
5,158,167	+		PFLU_RS22930	0.42	-0.3
5,158,167	+		PFLU_RS22930	0.42	-0.7
5,158,167	+		PFLU_RS22930	0.42	+1.0
5,158,167	+		PFLU_RS22930	0.42	+0.7
5,158,167	+		PFLU_RS22930	0.42	+0.8
5,158,167	+		PFLU_RS22930	0.42	+0.1
5,158,168	-		PFLU_RS22930	0.42	+0.1
5,158,168	-		PFLU_RS22930	0.42	-0.2
5,158,450	+		PFLU_RS22930	0.74	+1.2
5,158,451	-		PFLU_RS22930	0.74	+0.9
5,158,465	+		PFLU_RS22930	0.76	+1.5
5,158,466	-		PFLU_RS22930	0.76	-2.4
5,158,475	+		PFLU_RS22930	0.77	-0.4
5,158,476	-		PFLU_RS22930	0.77	-1.3
5,158,489	+		PFLU_RS22930	0.78	+0.3
5,158,490	-		PFLU_RS22930	0.78	+1.4
5,158,490	-		PFLU_RS22930	0.78	+1.6
5,158,534	+		PFLU_RS22930	0.83	+2.1
5,158,534	+		PFLU_RS22930	0.83	+2.4
5,158,534	+		PFLU_RS22930	0.83	-1.9
5,158,535	-		PFLU_RS22930	0.83	+0.1
5,158,535	-		PFLU_RS22930	0.83	+0.1
5,158,535	-		PFLU_RS22930	0.83	+1.1
5,158,575	+		PFLU_RS22930	0.88	-1.6
5,158,575	+		PFLU_RS22930	0.88	+1.1
5,158,575	+		PFLU_RS22930	0.88	+0.4
5,158,575	+		PFLU_RS22930	0.88	-2.5
5,158,575	+		PFLU_RS22930	0.88	-0.9
5,158,575	+		PFLU_RS22930	0.88	+1.7
5,158,576	-		PFLU_RS22930	0.88	-0.9
5,158,576	-		PFLU_RS22930	0.88	-2.5
5,158,576	-		PFLU_RS22930	0.88	+0.7
5,158,769	+				-1.4
5,158,769	+				-0.9
5,158,769	+				-1.3
5,158,770	-				-1.9
5,158,770	-				+0.1
5,158,770	-				-0.2
5,158,770	-				-0.9
5,158,867	+				+0.4
5,158,867	+				+0.8
5,158,867	+				-1.0
5,158,867	+				+0.3
5,158,867	+				-1.3
5,158,867	+				+1.1
5,158,867	+				+0.7
5,158,867	+				-1.3
5,158,867	+				-0.9
5,158,867	+				-1.2
5,158,867	+				+0.8
5,158,867	+				+0.9
5,158,867	+				+1.1
5,158,867	+				+0.2
5,158,867	+				+2.2
5,158,867	+				+0.7
5,158,867	+				+1.1
5,158,867	+				-1.4
5,158,867	+				+0.7
5,158,868	-				-1.0
5,158,868	-				+2.3
5,158,868	-				-0.9
5,158,868	-				-1.7
5,158,868	-				-0.8
5,158,868	-				+0.9
5,158,868	-				+0.2
5,158,868	-				-0.7
5,158,868	-				-2.2
5,158,868	-				-0.4
5,158,868	-				+1.4
5,158,868	-				-1.3
5,158,868	-				-2.9
5,158,868	-				+2.2
5,158,868	-				-0.9
5,158,868	-				-1.9
5,158,868	-				+1.2
5,158,868	-				-0.3
5,158,868	-				+0.3
5,158,868	-				+0.5
5,158,883	-				+0.2
5,158,972	+		PFLU_RS22935	0.10	-1.9
5,158,972	+		PFLU_RS22935	0.10	+1.0
5,158,972	+		PFLU_RS22935	0.10	+1.5
5,158,972	+		PFLU_RS22935	0.10	+0.6
5,158,973	-		PFLU_RS22935	0.10	+1.6
5,158,973	-		PFLU_RS22935	0.10	-1.0
5,158,973	-		PFLU_RS22935	0.10	+0.2
5,159,032	+		PFLU_RS22935	0.16	+0.0
5,159,033	-		PFLU_RS22935	0.16	-2.2
5,159,101	-		PFLU_RS22935	0.23	-0.7
5,159,182	+		PFLU_RS22935	0.30	+1.3
5,159,182	+		PFLU_RS22935	0.30	-2.7
5,159,183	-		PFLU_RS22935	0.30	-1.4
5,159,183	-		PFLU_RS22935	0.30	+0.4
5,159,183	-		PFLU_RS22935	0.30	+0.7
5,159,183	-		PFLU_RS22935	0.30	+2.4
5,159,209	+		PFLU_RS22935	0.33	-0.9
5,159,209	+		PFLU_RS22935	0.33	+0.5
5,159,209	+		PFLU_RS22935	0.33	-0.1
5,159,209	+		PFLU_RS22935	0.33	+0.6
5,159,209	+		PFLU_RS22935	0.33	+0.2
5,159,209	+		PFLU_RS22935	0.33	+0.5
5,159,210	-		PFLU_RS22935	0.33	+0.7
5,159,210	-		PFLU_RS22935	0.33	-2.5
5,159,210	-		PFLU_RS22935	0.33	+1.4
5,159,210	-		PFLU_RS22935	0.33	+0.4
5,159,210	-		PFLU_RS22935	0.33	-2.3
5,159,210	-		PFLU_RS22935	0.33	+1.0
5,159,210	-		PFLU_RS22935	0.33	+0.7
5,159,210	-		PFLU_RS22935	0.33	+0.8
5,159,229	-		PFLU_RS22935	0.35	+1.4
5,159,229	-		PFLU_RS22935	0.35	+2.0
5,159,356	+		PFLU_RS22935	0.47	+1.3
5,159,356	+		PFLU_RS22935	0.47	+1.7
5,159,356	+		PFLU_RS22935	0.47	-1.9
5,159,356	+		PFLU_RS22935	0.47	+1.5
5,159,356	+		PFLU_RS22935	0.47	+0.6
5,159,356	+		PFLU_RS22935	0.47	-0.3
5,159,356	+		PFLU_RS22935	0.47	-0.3
5,159,356	+		PFLU_RS22935	0.47	+1.3
5,159,356	+		PFLU_RS22935	0.47	+1.1
5,159,356	+		PFLU_RS22935	0.47	-2.7
5,159,356	+		PFLU_RS22935	0.47	+0.3
5,159,357	-		PFLU_RS22935	0.47	+1.1
5,159,357	-		PFLU_RS22935	0.47	+0.4
5,159,357	-		PFLU_RS22935	0.47	+1.8
5,159,357	-		PFLU_RS22935	0.47	-0.6
5,159,357	-		PFLU_RS22935	0.47	+0.7
5,159,357	-		PFLU_RS22935	0.47	-1.5
5,159,357	-		PFLU_RS22935	0.47	+0.8
5,159,357	-		PFLU_RS22935	0.47	+0.1
5,159,357	-		PFLU_RS22935	0.47	-1.4
5,159,357	-		PFLU_RS22935	0.47	-0.5
5,159,374	+		PFLU_RS22935	0.48	+1.3
5,159,375	-		PFLU_RS22935	0.49	-2.1
5,159,405	+		PFLU_RS22935	0.51	-0.6
5,159,406	-		PFLU_RS22935	0.51	+0.4
5,159,406	-		PFLU_RS22935	0.51	+1.3
5,159,627	-		PFLU_RS22935	0.72	+0.7
5,159,848	+				+0.7
5,159,848	+				-2.4
5,159,848	+				-1.1
5,159,848	+				-2.4
5,159,849	-				-2.5
5,159,878	+				+1.3
5,159,879	-				-2.2
5,159,879	-				+1.6
5,160,005	+		PFLU_RS22940	0.11	+1.1
5,160,005	+		PFLU_RS22940	0.11	-1.1
5,160,005	+		PFLU_RS22940	0.11	+0.6
5,160,005	+		PFLU_RS22940	0.11	-1.0
5,160,005	+		PFLU_RS22940	0.11	-2.5
5,160,005	+		PFLU_RS22940	0.11	+0.1
5,160,005	+		PFLU_RS22940	0.11	-1.9
5,160,005	+		PFLU_RS22940	0.11	+1.0
5,160,005	+		PFLU_RS22940	0.11	-0.3
5,160,005	+		PFLU_RS22940	0.11	-0.4
5,160,005	+		PFLU_RS22940	0.11	-0.8
5,160,005	+		PFLU_RS22940	0.11	-3.1
5,160,005	+		PFLU_RS22940	0.11	-0.3
5,160,005	+		PFLU_RS22940	0.11	-0.7
5,160,006	-		PFLU_RS22940	0.11	-0.0
5,160,006	-		PFLU_RS22940	0.11	+0.3
5,160,006	-		PFLU_RS22940	0.11	-1.3
5,160,006	-		PFLU_RS22940	0.11	-0.8
5,160,006	-		PFLU_RS22940	0.11	+1.7
5,160,006	-		PFLU_RS22940	0.11	+0.1
5,160,006	-		PFLU_RS22940	0.11	-0.5
5,160,006	-		PFLU_RS22940	0.11	+1.1
5,160,006	-		PFLU_RS22940	0.11	-0.9
5,160,006	-		PFLU_RS22940	0.11	+1.1
5,160,006	-		PFLU_RS22940	0.11	-2.9
5,160,006	-		PFLU_RS22940	0.11	-1.3
5,160,006	-		PFLU_RS22940	0.11	-0.9
5,160,006	-		PFLU_RS22940	0.11	+0.4
5,160,006	-		PFLU_RS22940	0.11	+2.7
5,160,015	+		PFLU_RS22940	0.12	-1.3
5,160,015	+		PFLU_RS22940	0.12	-1.3
5,160,131	+		PFLU_RS22940	0.27	-0.3
5,160,131	+		PFLU_RS22940	0.27	-2.7
5,160,131	+		PFLU_RS22940	0.27	-1.3
5,160,131	+		PFLU_RS22940	0.27	-1.2
5,160,132	-		PFLU_RS22940	0.27	-1.7
5,160,132	-		PFLU_RS22940	0.27	-1.4
5,160,132	-		PFLU_RS22940	0.27	-2.2
5,160,132	-		PFLU_RS22940	0.27	-0.9
5,160,132	-		PFLU_RS22940	0.27	-2.9
5,160,132	-		PFLU_RS22940	0.27	-0.0
5,160,132	-		PFLU_RS22940	0.27	-0.6
5,160,132	-		PFLU_RS22940	0.27	+1.3
5,160,224	+		PFLU_RS22940	0.38	+0.7
5,160,224	+		PFLU_RS22940	0.38	-1.7
5,160,224	+		PFLU_RS22940	0.38	+0.1
5,160,225	-		PFLU_RS22940	0.38	+2.0
5,160,225	-		PFLU_RS22940	0.38	+2.3
5,160,225	-		PFLU_RS22940	0.38	-0.9
5,160,225	-		PFLU_RS22940	0.38	-1.2
5,160,225	-		PFLU_RS22940	0.38	-0.6
5,160,282	+		PFLU_RS22940	0.45	-0.1
5,160,356	+		PFLU_RS22940	0.55	+0.7
5,160,356	+		PFLU_RS22940	0.55	+1.1
5,160,356	+		PFLU_RS22940	0.55	-0.0
5,160,356	+		PFLU_RS22940	0.55	-1.6
5,160,356	+		PFLU_RS22940	0.55	-2.2
5,160,356	+		PFLU_RS22940	0.55	-0.1
5,160,357	-		PFLU_RS22940	0.55	-0.4
5,160,357	-		PFLU_RS22940	0.55	+1.0
5,160,357	-		PFLU_RS22940	0.55	-1.4
5,160,357	-		PFLU_RS22940	0.55	+0.1
5,160,357	-		PFLU_RS22940	0.55	-1.6
5,160,357	-		PFLU_RS22940	0.55	-1.3
5,160,371	+		PFLU_RS22940	0.56	+0.4
5,160,372	-		PFLU_RS22940	0.57	-1.1
5,160,428	+		PFLU_RS22940	0.64	-0.9
5,160,428	+		PFLU_RS22940	0.64	+1.2
5,160,507	-		PFLU_RS22940	0.73	+0.3
5,160,533	+		PFLU_RS22940	0.77	+0.1
5,160,533	+		PFLU_RS22940	0.77	-2.4
5,160,533	+		PFLU_RS22940	0.77	-0.8
5,160,533	+		PFLU_RS22940	0.77	+0.1
5,160,534	-		PFLU_RS22940	0.77	+0.7
5,160,534	-		PFLU_RS22940	0.77	+0.7
5,160,729	+				-0.9
5,160,729	+				-0.8
5,160,729	+				-0.6
5,160,729	+				-1.9
5,160,729	+				-1.4
5,160,729	+				+1.1
5,160,729	+				+1.0
5,160,729	+				-1.1
5,160,729	+				-1.1
5,160,729	+				+0.8
5,160,730	-				+0.1
5,160,730	-				+0.8
5,160,730	-				-0.4
5,160,730	-				+1.2
5,160,730	-				+0.4
5,160,730	-				+1.7
5,160,732	+				-1.1
5,160,732	+				-0.0
5,160,732	+				-1.1
5,160,732	+				-0.4
5,160,732	+				-1.7
5,160,732	+				-0.1
5,160,732	+				+1.2
5,160,732	+				+0.7
5,160,732	+				-1.9
5,160,732	+				-1.5
5,160,732	+				+0.1
5,160,733	-				+0.1
5,160,733	-				+1.6
5,160,733	-				-0.9
5,160,733	-				+0.7
5,160,733	-				+0.6
5,160,733	-				+0.7
5,160,733	-				-0.1
5,160,733	-				+0.1
5,160,733	-				-0.9
5,160,733	-				+1.7
5,160,752	+				-1.0
5,160,753	-				+2.7
5,160,753	-				+1.2
5,160,753	-				-0.2
5,160,761	+				-0.4
5,160,762	-				+0.3
5,160,762	-				-0.1
5,160,762	-				+0.6
5,160,762	-				-0.6
5,160,774	+				-0.0
5,160,774	+				-0.4
5,160,774	+				-1.3
5,160,774	+				-2.1
5,160,774	+				-0.1
5,160,774	+				-2.7
5,160,774	+				+1.1
5,160,774	+				+1.3
5,160,774	+				+1.1
5,160,774	+				-0.8
5,160,774	+				+0.8
5,160,775	-				+1.2
5,160,775	-				-0.1
5,160,775	-				-1.3
5,160,775	-				-0.4
5,160,775	-				+0.5
5,160,775	-				-0.9
5,160,838	-				+0.7
5,160,838	-				+0.1
5,160,838	-				-0.1
5,160,838	-				+0.3
5,160,838	-				+1.4
5,160,838	-				-2.1
5,160,838	-				-0.6
5,160,838	-				+1.5
5,160,838	-				-1.1
5,160,838	-				+0.4
5,160,838	-				-1.4
5,160,838	-				+0.5
5,160,892	+				-1.8
5,160,892	+				+1.0
5,160,892	+				-0.4
5,160,893	-				+1.7