Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21880

Experiment: L-Ornithine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Ornithine 10 mM (C)
4,925,374	+		PFLU_RS21870	0.42	-1.8
4,925,374	+		PFLU_RS21870	0.42	+2.3
4,925,375	-		PFLU_RS21870	0.43	-1.4
4,925,392	-		PFLU_RS21870	0.45	-0.2
4,925,392	-		PFLU_RS21870	0.45	-0.6
4,925,461	+		PFLU_RS21870	0.53	+0.7
4,925,462	-		PFLU_RS21870	0.54	+0.0
4,925,462	-		PFLU_RS21870	0.54	+1.6
4,925,487	+		PFLU_RS21870	0.57	+0.3
4,925,503	+		PFLU_RS21870	0.59	-1.6
4,925,504	-		PFLU_RS21870	0.59	-2.4
4,925,504	-		PFLU_RS21870	0.59	-1.1
4,925,518	+		PFLU_RS21870	0.61	-0.4
4,925,518	+		PFLU_RS21870	0.61	+3.1
4,925,519	-		PFLU_RS21870	0.61	-0.8
4,925,519	-		PFLU_RS21870	0.61	-0.5
4,925,568	+		PFLU_RS21870	0.67	+1.3
4,925,568	+		PFLU_RS21870	0.67	-1.3
4,925,568	+		PFLU_RS21870	0.67	+1.3
4,925,568	+		PFLU_RS21870	0.67	+0.6
4,925,568	+		PFLU_RS21870	0.67	-1.5
4,925,568	+		PFLU_RS21870	0.67	+1.7
4,925,569	-		PFLU_RS21870	0.67	-2.3
4,925,569	-		PFLU_RS21870	0.67	+0.9
4,925,569	-		PFLU_RS21870	0.67	+0.4
4,925,572	+		PFLU_RS21870	0.67	+1.3
4,925,572	+		PFLU_RS21870	0.67	+0.5
4,925,572	+		PFLU_RS21870	0.67	+0.2
4,925,572	+		PFLU_RS21870	0.67	-0.8
4,925,573	-		PFLU_RS21870	0.68	+0.5
4,925,573	-		PFLU_RS21870	0.68	+0.2
4,925,573	-		PFLU_RS21870	0.68	-1.7
4,925,573	-		PFLU_RS21870	0.68	-0.8
4,925,573	-		PFLU_RS21870	0.68	+1.6
4,925,573	-		PFLU_RS21870	0.68	-2.0
4,925,573	-		PFLU_RS21870	0.68	-1.8
4,925,573	-		PFLU_RS21870	0.68	+0.2
4,925,611	+		PFLU_RS21870	0.72	-2.0
4,925,611	+		PFLU_RS21870	0.72	+0.2
4,925,611	+		PFLU_RS21870	0.72	-1.4
4,925,612	-		PFLU_RS21870	0.72	-0.7
4,925,612	-		PFLU_RS21870	0.72	+0.5
4,925,612	-		PFLU_RS21870	0.72	+0.9
4,925,612	-		PFLU_RS21870	0.72	-1.3
4,925,612	-		PFLU_RS21870	0.72	+0.6
4,925,612	-		PFLU_RS21870	0.72	+0.4
4,925,612	-		PFLU_RS21870	0.72	+1.4
4,925,612	-		PFLU_RS21870	0.72	-2.8
4,925,701	+		PFLU_RS21870	0.84	-0.7
4,925,701	+		PFLU_RS21870	0.84	-1.1
4,925,702	-		PFLU_RS21870	0.84	-2.0
4,925,702	-		PFLU_RS21870	0.84	+0.6
4,925,702	-		PFLU_RS21870	0.84	-1.3
4,925,702	-		PFLU_RS21870	0.84	+0.5
4,925,834	+				-0.6
4,925,834	+				-0.7
4,925,834	+				+1.1
4,925,834	+				+3.3
4,925,834	+				-1.7
4,925,834	+				+2.2
4,925,834	+				-0.8
4,925,834	+				-0.4
4,925,834	+				-1.7
4,925,834	+				-2.1
4,925,834	+				+0.4
4,925,834	+				-0.1
4,925,834	+				+1.0
4,925,834	+				+1.1
4,925,834	+				+0.5
4,925,834	+				+1.3
4,925,834	+				+0.5
4,925,834	+				+0.7
4,925,834	+				+1.2
4,925,835	-				-1.7
4,925,835	-				+0.5
4,925,835	-				+0.8
4,925,835	-				+0.5
4,925,835	-				+0.3
4,925,835	-				+0.7
4,925,835	-				-1.6
4,925,835	-				+0.2
4,925,880	+				-1.6
4,925,880	+				-0.9
4,925,891	+				-0.0
4,925,891	+				-0.3
4,926,280	+				+1.0
4,926,280	+				-1.5
4,926,280	+				+0.8
4,926,280	+				+0.0
4,926,280	+				+0.8
4,926,281	-				+1.7
4,926,281	-				+0.9
4,926,281	-				+0.0
4,926,281	-				+0.8
4,926,281	-				+1.4
4,926,281	-				+1.2
4,926,281	-				+0.3
4,926,281	-				-0.8
4,926,342	+				+0.2
4,926,342	+				+0.4
4,926,342	+				+1.3
4,926,342	+				+0.2
4,926,343	-				+0.2
4,926,343	-				+3.1
4,926,343	-				-1.3
4,926,390	+				+1.7
4,926,390	+				-0.5
4,926,390	+				-0.7
4,926,390	+				-0.3
4,926,390	+				-1.0
4,926,390	+				-1.3
4,926,390	+				-1.7
4,926,390	+				-1.1
4,926,390	+				-0.8
4,926,390	+				+0.2
4,926,391	-				-0.3
4,926,391	-				-1.5
4,926,391	-				+1.0
4,926,391	-				-1.8
4,926,391	-				+2.2
4,926,391	-				+2.7
4,926,391	-				-0.9
4,926,391	-				-3.0
4,926,392	+				-3.1
4,926,392	+				-0.6
4,926,392	+				+0.5
4,926,393	-				+0.9
4,926,393	-				-1.4
4,926,393	-				-1.1
4,926,477	+		PFLU_RS21880	0.16	-1.7
4,926,477	+		PFLU_RS21880	0.16	+0.3
4,926,477	+		PFLU_RS21880	0.16	+1.0
4,926,477	+		PFLU_RS21880	0.16	-0.5
4,926,477	+		PFLU_RS21880	0.16	-0.6
4,926,477	+		PFLU_RS21880	0.16	+0.9
4,926,477	+		PFLU_RS21880	0.16	+1.0
4,926,477	+		PFLU_RS21880	0.16	+0.2
4,926,477	+		PFLU_RS21880	0.16	+0.3
4,926,477	+		PFLU_RS21880	0.16	-1.1
4,926,477	+		PFLU_RS21880	0.16	-1.7
4,926,477	+		PFLU_RS21880	0.16	+0.7
4,926,477	+		PFLU_RS21880	0.16	-0.1
4,926,477	+		PFLU_RS21880	0.16	-0.3
4,926,478	-		PFLU_RS21880	0.16	+1.5
4,926,478	-		PFLU_RS21880	0.16	+1.7
4,926,478	-		PFLU_RS21880	0.16	-0.1
4,926,478	-		PFLU_RS21880	0.16	+0.5
4,926,478	-		PFLU_RS21880	0.16	-0.3
4,926,478	-		PFLU_RS21880	0.16	+1.7
4,926,478	-		PFLU_RS21880	0.16	-0.3
4,926,478	-		PFLU_RS21880	0.16	+0.2
4,926,478	-		PFLU_RS21880	0.16	+0.9
4,926,478	-		PFLU_RS21880	0.16	+0.0
4,926,478	-		PFLU_RS21880	0.16	-0.8
4,926,478	-		PFLU_RS21880	0.16	-1.6
4,926,494	+		PFLU_RS21880	0.18	+0.5
4,926,729	+		PFLU_RS21880	0.37	-2.2
4,926,729	+		PFLU_RS21880	0.37	-2.5
4,926,729	+		PFLU_RS21880	0.37	+2.3
4,926,729	+		PFLU_RS21880	0.37	+1.2
4,926,730	-		PFLU_RS21880	0.38	+0.1
4,926,730	-		PFLU_RS21880	0.38	+0.7
4,926,730	-		PFLU_RS21880	0.38	-0.9
4,926,921	+		PFLU_RS21880	0.54	-3.1
4,926,921	+		PFLU_RS21880	0.54	+0.7
4,927,032	+		PFLU_RS21880	0.63	+1.3
4,927,032	+		PFLU_RS21880	0.63	+0.2
4,927,032	+		PFLU_RS21880	0.63	-0.8
4,927,032	+		PFLU_RS21880	0.63	-0.8
4,927,032	+		PFLU_RS21880	0.63	-1.1
4,927,033	-		PFLU_RS21880	0.63	-0.8
4,927,033	-		PFLU_RS21880	0.63	+1.2
4,927,033	-		PFLU_RS21880	0.63	+1.7
4,927,033	-		PFLU_RS21880	0.63	+1.3
4,927,097	+		PFLU_RS21880	0.68	-1.4
4,927,213	+		PFLU_RS21880	0.78	+3.7
4,927,213	+		PFLU_RS21880	0.78	-3.5
4,927,213	+		PFLU_RS21880	0.78	-0.5
4,927,213	+		PFLU_RS21880	0.78	-0.8
4,927,213	+		PFLU_RS21880	0.78	-0.4
4,927,213	+		PFLU_RS21880	0.78	+2.0
4,927,213	+		PFLU_RS21880	0.78	-0.3
4,927,214	-		PFLU_RS21880	0.78	-1.3
4,927,214	-		PFLU_RS21880	0.78	+2.3
4,927,214	-		PFLU_RS21880	0.78	+0.2
4,927,214	-		PFLU_RS21880	0.78	+1.2
4,927,214	-		PFLU_RS21880	0.78	+0.7
4,927,214	-		PFLU_RS21880	0.78	+1.7
4,927,214	-		PFLU_RS21880	0.78	-1.7
4,927,214	-		PFLU_RS21880	0.78	+1.9
4,927,214	-		PFLU_RS21880	0.78	+1.4
4,927,214	-		PFLU_RS21880	0.78	+1.7
4,927,214	-		PFLU_RS21880	0.78	-0.2
4,927,293	+		PFLU_RS21880	0.85	-2.5
4,927,293	+		PFLU_RS21880	0.85	+0.8
4,927,330	-		PFLU_RS21880	0.88	-1.1
4,927,330	-		PFLU_RS21880	0.88	+0.4
4,927,330	-		PFLU_RS21880	0.88	+0.8
4,927,330	-		PFLU_RS21880	0.88	+1.2
4,927,330	-		PFLU_RS21880	0.88	+1.5
4,927,355	+		PFLU_RS21880	0.90	-2.5
4,927,355	+		PFLU_RS21880	0.90	+0.7
4,927,356	-				+0.6
4,927,356	-				-3.3
4,927,383	+				-2.4
4,927,383	+				+0.2
4,927,383	+				-0.8
4,927,383	+				+1.2
4,927,383	+				+0.9
4,927,383	+				-1.7
4,927,383	+				-0.5
4,927,383	+				+0.9
4,927,383	+				-0.5
4,927,383	+				-0.6
4,927,383	+				+2.3
4,927,383	+				+1.1
4,927,383	+				+1.3
4,927,383	+				-2.0
4,927,383	+				-0.3
4,927,383	+				+2.1
4,927,383	+				+0.2
4,927,383	+				-1.7
4,927,383	+				+2.0
4,927,383	+				+1.3
4,927,384	-				-0.3
4,927,384	-				-0.8
4,927,384	-				+0.7
4,927,384	-				-2.8
4,927,384	-				+1.2
4,927,384	-				+0.2
4,927,384	-				-0.8
4,927,384	-				+0.2
4,927,384	-				+0.7
4,927,384	-				-0.1
4,927,384	-				-2.2
4,927,384	-				+1.2
4,927,384	-				-1.6
4,927,384	-				+0.7
4,927,384	-				-0.5
4,927,384	-				+0.2
4,927,488	-				-0.3
4,927,488	-				+1.5
4,927,488	-				-0.1
4,927,488	-				-1.7
4,927,522	+				-1.6
4,927,522	+				+2.2
4,927,522	+				-1.6
4,927,522	+				-1.1
4,927,522	+				-1.3
4,927,522	+				-2.1
4,927,522	+				+1.1
4,927,522	+				-2.4
4,927,522	+				+2.1
4,927,522	+				+0.7
4,927,523	-				+1.7
4,927,524	+				+1.7
4,927,524	+				+0.9
4,927,524	+				-2.5
4,927,524	+				+0.9
4,927,524	+				+1.3
4,927,524	+				+1.2
4,927,524	+				+2.2
4,927,537	+				+0.2
4,927,537	+				+1.2
4,927,537	+				-1.4
4,927,537	+				-0.5
4,927,537	+				+1.7
4,927,537	+				+0.2
4,927,538	-				-0.2
4,927,538	-				+2.2
4,927,538	-				+0.7
4,927,538	-				-1.1
4,927,538	-				-1.1
4,927,538	-				+1.0
4,927,538	-				+0.7
4,927,538	-				-0.4
4,927,596	-				-0.6
4,927,596	-				+2.3
4,927,596	-				+1.3
4,927,625	+				-2.2
4,927,625	+				+0.5
4,927,626	-				+0.9
4,927,626	-				-1.2
4,927,626	-				-3.3
4,927,626	-				-1.4
4,927,663	+				-1.6
4,927,664	-				-2.0
4,927,664	-				-0.8
4,927,664	-				+0.5
4,927,735	+		PFLU_RS21885	0.16	-2.6
4,927,735	+		PFLU_RS21885	0.16	-1.1
4,927,735	+		PFLU_RS21885	0.16	+0.7
4,927,736	-		PFLU_RS21885	0.17	-0.1
4,927,736	-		PFLU_RS21885	0.17	+0.6
4,927,736	-		PFLU_RS21885	0.17	+0.3
4,927,776	-		PFLU_RS21885	0.21	+0.4
4,927,883	-		PFLU_RS21885	0.35	+1.7
4,927,883	-		PFLU_RS21885	0.35	+0.9
4,927,900	+		PFLU_RS21885	0.37	-0.3
4,927,900	+		PFLU_RS21885	0.37	-1.7
4,927,901	-		PFLU_RS21885	0.37	-1.5
4,927,907	-		PFLU_RS21885	0.38	+0.8
4,927,963	+		PFLU_RS21885	0.45	-0.6
4,927,963	+		PFLU_RS21885	0.45	+0.3
4,927,963	+		PFLU_RS21885	0.45	+0.9
4,927,964	-		PFLU_RS21885	0.45	+1.5
4,928,000	-		PFLU_RS21885	0.49	-1.1
4,928,149	+		PFLU_RS21885	0.68	+1.0
4,928,149	+		PFLU_RS21885	0.68	-2.8
4,928,149	+		PFLU_RS21885	0.68	-1.8
4,928,149	+		PFLU_RS21885	0.68	-0.1
4,928,149	+		PFLU_RS21885	0.68	-1.6
4,928,149	+		PFLU_RS21885	0.68	-1.4
4,928,149	+		PFLU_RS21885	0.68	-1.0
4,928,149	+		PFLU_RS21885	0.68	-1.3
4,928,149	+		PFLU_RS21885	0.68	-2.2
4,928,149	+		PFLU_RS21885	0.68	-0.3
4,928,149	+		PFLU_RS21885	0.68	+0.2
4,928,149	+		PFLU_RS21885	0.68	-0.3
4,928,149	+		PFLU_RS21885	0.68	-0.3
4,928,149	+		PFLU_RS21885	0.68	+0.4
4,928,149	+		PFLU_RS21885	0.68	+1.7
4,928,149	+		PFLU_RS21885	0.68	+1.0
4,928,149	+		PFLU_RS21885	0.68	-1.3
4,928,149	+		PFLU_RS21885	0.68	-0.1
4,928,149	+		PFLU_RS21885	0.68	-2.5
4,928,149	+		PFLU_RS21885	0.68	-1.3
4,928,149	+		PFLU_RS21885	0.68	+1.2
4,928,149	+		PFLU_RS21885	0.68	+1.5
4,928,150	-		PFLU_RS21885	0.68	+1.1
4,928,150	-		PFLU_RS21885	0.68	+0.6
4,928,150	-		PFLU_RS21885	0.68	+0.7
4,928,150	-		PFLU_RS21885	0.68	-1.1
4,928,150	-		PFLU_RS21885	0.68	-1.7
4,928,150	-		PFLU_RS21885	0.68	-2.2
4,928,150	-		PFLU_RS21885	0.68	+0.6
4,928,150	-		PFLU_RS21885	0.68	-0.7
4,928,150	-		PFLU_RS21885	0.68	-2.0
4,928,150	-		PFLU_RS21885	0.68	+1.6
4,928,150	-		PFLU_RS21885	0.68	+1.0
4,928,150	-		PFLU_RS21885	0.68	+0.4
4,928,150	-		PFLU_RS21885	0.68	-2.5
4,928,150	-		PFLU_RS21885	0.68	+0.2
4,928,150	-		PFLU_RS21885	0.68	-1.6
4,928,150	-		PFLU_RS21885	0.68	-0.3
4,928,150	-		PFLU_RS21885	0.68	+0.7
4,928,150	-		PFLU_RS21885	0.68	-1.7
4,928,150	-		PFLU_RS21885	0.68	+3.7
4,928,150	-		PFLU_RS21885	0.68	-0.5
4,928,150	-		PFLU_RS21885	0.68	+0.4
4,928,150	-		PFLU_RS21885	0.68	+0.7
4,928,150	-		PFLU_RS21885	0.68	-0.6
4,928,150	-		PFLU_RS21885	0.68	+1.5
4,928,150	-		PFLU_RS21885	0.68	+1.8
4,928,150	-		PFLU_RS21885	0.68	-0.2
4,928,150	-		PFLU_RS21885	0.68	+0.2
4,928,150	-		PFLU_RS21885	0.68	+0.2
4,928,221	+		PFLU_RS21885	0.76	+1.7
4,928,221	+		PFLU_RS21885	0.76	+0.9
4,928,221	+		PFLU_RS21885	0.76	-2.3
4,928,221	+		PFLU_RS21885	0.76	-0.3
4,928,221	+		PFLU_RS21885	0.76	-0.1
4,928,221	+		PFLU_RS21885	0.76	-0.2
4,928,221	+		PFLU_RS21885	0.76	+0.6
4,928,221	+		PFLU_RS21885	0.76	+0.6
4,928,221	+		PFLU_RS21885	0.76	+0.7
4,928,221	+		PFLU_RS21885	0.76	+1.2
4,928,221	+		PFLU_RS21885	0.76	-0.8
4,928,221	+		PFLU_RS21885	0.76	+0.6
4,928,221	+		PFLU_RS21885	0.76	-0.7
4,928,222	-		PFLU_RS21885	0.77	-0.4
4,928,222	-		PFLU_RS21885	0.77	+2.2
4,928,222	-		PFLU_RS21885	0.77	-1.4
4,928,222	-		PFLU_RS21885	0.77	+0.7
4,928,222	-		PFLU_RS21885	0.77	+2.1
4,928,222	-		PFLU_RS21885	0.77	+0.3
4,928,222	-		PFLU_RS21885	0.77	+1.3
4,928,222	-		PFLU_RS21885	0.77	-2.3
4,928,222	-		PFLU_RS21885	0.77	+0.5
4,928,222	-		PFLU_RS21885	0.77	-1.1
4,928,222	-		PFLU_RS21885	0.77	+1.3
4,928,222	-		PFLU_RS21885	0.77	+1.1
4,928,222	-		PFLU_RS21885	0.77	+0.3
4,928,222	-		PFLU_RS21885	0.77	-0.3
4,928,222	-		PFLU_RS21885	0.77	-0.5
4,928,222	-		PFLU_RS21885	0.77	-2.4
4,928,222	-		PFLU_RS21885	0.77	-1.1
4,928,222	-		PFLU_RS21885	0.77	+0.6
4,928,222	-		PFLU_RS21885	0.77	+0.7
4,928,222	-		PFLU_RS21885	0.77	-1.1
4,928,222	-		PFLU_RS21885	0.77	-0.7
4,928,222	-		PFLU_RS21885	0.77	-1.2
4,928,222	-		PFLU_RS21885	0.77	-0.1
4,928,222	-		PFLU_RS21885	0.77	-0.5
4,928,222	-		PFLU_RS21885	0.77	+1.7
4,928,222	-		PFLU_RS21885	0.77	-0.8
4,928,269	+		PFLU_RS21885	0.82	-1.1
4,928,270	-		PFLU_RS21885	0.82	+0.6
4,928,270	-		PFLU_RS21885	0.82	+1.0
4,928,270	-		PFLU_RS21885	0.82	+0.3
4,928,270	-		PFLU_RS21885	0.82	-2.4
4,928,270	-		PFLU_RS21885	0.82	+2.5
4,928,276	+		PFLU_RS21885	0.83	+0.1
4,928,277	-		PFLU_RS21885	0.83	-0.6
4,928,287	+		PFLU_RS21885	0.85	-0.4
4,928,288	-		PFLU_RS21885	0.85	+1.3
4,928,456	+				-0.2
4,928,456	+				-0.1
4,928,457	-				+0.8
4,928,459	+				-1.1
4,928,460	-				+1.7
4,928,460	-				+0.9
4,928,460	-				+1.7
4,928,460	-				-1.5
4,928,460	-				+0.8