Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS15480

Experiment: L-Ornithine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Ornithine 10 mM (C)
3,466,165	-		PFLU_RS15470	0.71	-2.0
3,466,181	+		PFLU_RS15470	0.76	+0.0
3,466,219	+		PFLU_RS15470	0.88	-1.0
3,466,272	+				-0.9
3,466,272	+				-2.2
3,466,272	+				-1.3
3,466,272	+				+1.1
3,466,272	+				+1.6
3,466,273	-				-0.3
3,466,273	-				-1.8
3,466,303	+				+0.3
3,466,303	+				+0.9
3,466,303	+				-1.3
3,466,303	+				-1.0
3,466,303	+				+1.0
3,466,303	+				-0.0
3,466,304	-				+1.1
3,466,304	-				-0.7
3,466,538	+		PFLU_RS15475	0.27	-2.1
3,466,538	+		PFLU_RS15475	0.27	+0.3
3,466,539	-		PFLU_RS15475	0.27	+0.7
3,466,586	+		PFLU_RS15475	0.34	+0.1
3,466,586	+		PFLU_RS15475	0.34	+1.0
3,466,586	+		PFLU_RS15475	0.34	+0.5
3,466,586	+		PFLU_RS15475	0.34	-0.5
3,466,587	-		PFLU_RS15475	0.34	-2.8
3,466,587	-		PFLU_RS15475	0.34	-1.9
3,466,587	-		PFLU_RS15475	0.34	+1.4
3,466,589	+		PFLU_RS15475	0.35	-0.6
3,466,589	+		PFLU_RS15475	0.35	+0.9
3,466,589	+		PFLU_RS15475	0.35	-0.1
3,466,589	+		PFLU_RS15475	0.35	+3.0
3,466,590	-		PFLU_RS15475	0.35	+0.3
3,466,644	+		PFLU_RS15475	0.43	+1.9
3,466,644	+		PFLU_RS15475	0.43	+0.5
3,466,644	+		PFLU_RS15475	0.43	+0.1
3,466,644	+		PFLU_RS15475	0.43	+0.7
3,466,644	+		PFLU_RS15475	0.43	+1.5
3,466,644	+		PFLU_RS15475	0.43	-1.9
3,466,644	+		PFLU_RS15475	0.43	-2.0
3,466,644	+		PFLU_RS15475	0.43	-2.4
3,466,644	+		PFLU_RS15475	0.43	-0.0
3,466,644	+		PFLU_RS15475	0.43	-1.9
3,466,645	-		PFLU_RS15475	0.43	+1.6
3,466,645	-		PFLU_RS15475	0.43	+2.6
3,466,645	-		PFLU_RS15475	0.43	+2.4
3,466,645	-		PFLU_RS15475	0.43	-2.5
3,466,645	-		PFLU_RS15475	0.43	+0.8
3,466,645	-		PFLU_RS15475	0.43	+1.7
3,466,645	-		PFLU_RS15475	0.43	-0.2
3,466,645	-		PFLU_RS15475	0.43	+0.8
3,466,645	-		PFLU_RS15475	0.43	-1.9
3,466,717	+		PFLU_RS15475	0.55	-1.5
3,466,718	-		PFLU_RS15475	0.55	-1.9
3,466,718	-		PFLU_RS15475	0.55	+2.3
3,466,718	-		PFLU_RS15475	0.55	+0.7
3,466,718	-		PFLU_RS15475	0.55	+1.5
3,466,718	-		PFLU_RS15475	0.55	+0.7
3,466,718	-		PFLU_RS15475	0.55	+3.3
3,466,718	-		PFLU_RS15475	0.55	-0.0
3,466,718	-		PFLU_RS15475	0.55	+1.3
3,466,805	+		PFLU_RS15475	0.69	-0.3
3,466,805	+		PFLU_RS15475	0.69	+1.3
3,466,805	+		PFLU_RS15475	0.69	-0.4
3,466,805	+		PFLU_RS15475	0.69	-2.8
3,466,806	-		PFLU_RS15475	0.69	+0.7
3,466,806	-		PFLU_RS15475	0.69	+0.3
3,466,809	+		PFLU_RS15475	0.69	+0.3
3,466,809	+		PFLU_RS15475	0.69	+1.9
3,466,809	+		PFLU_RS15475	0.69	+1.3
3,466,809	+		PFLU_RS15475	0.69	+0.1
3,466,809	+		PFLU_RS15475	0.69	+2.7
3,466,810	-		PFLU_RS15475	0.70	-3.0
3,466,810	-		PFLU_RS15475	0.70	-0.0
3,466,810	-		PFLU_RS15475	0.70	-2.0
3,466,810	-		PFLU_RS15475	0.70	-1.5
3,466,810	-		PFLU_RS15475	0.70	+1.9
3,466,810	-		PFLU_RS15475	0.70	+0.7
3,466,891	+		PFLU_RS15475	0.82	+0.3
3,466,891	+		PFLU_RS15475	0.82	+0.5
3,466,891	+		PFLU_RS15475	0.82	-2.0
3,466,891	+		PFLU_RS15475	0.82	+0.1
3,466,891	+		PFLU_RS15475	0.82	-0.3
3,466,891	+		PFLU_RS15475	0.82	+1.3
3,466,891	+		PFLU_RS15475	0.82	-0.7
3,466,891	+		PFLU_RS15475	0.82	-2.0
3,466,891	+		PFLU_RS15475	0.82	+1.2
3,466,891	+		PFLU_RS15475	0.82	+0.8
3,466,891	+		PFLU_RS15475	0.82	+1.3
3,466,891	+		PFLU_RS15475	0.82	+1.3
3,466,891	+		PFLU_RS15475	0.82	+1.0
3,466,891	+		PFLU_RS15475	0.82	-0.3
3,466,891	+		PFLU_RS15475	0.82	+1.1
3,466,892	-		PFLU_RS15475	0.82	+0.6
3,466,892	-		PFLU_RS15475	0.82	-1.3
3,466,892	-		PFLU_RS15475	0.82	-1.3
3,466,892	-		PFLU_RS15475	0.82	-1.7
3,466,892	-		PFLU_RS15475	0.82	+0.3
3,466,892	-		PFLU_RS15475	0.82	+0.8
3,466,892	-		PFLU_RS15475	0.82	+0.8
3,466,892	-		PFLU_RS15475	0.82	-1.3
3,466,892	-		PFLU_RS15475	0.82	+0.8
3,466,892	-		PFLU_RS15475	0.82	+1.9
3,466,892	-		PFLU_RS15475	0.82	+0.2
3,466,892	-		PFLU_RS15475	0.82	+0.3
3,466,892	-		PFLU_RS15475	0.82	+0.7
3,466,892	-		PFLU_RS15475	0.82	+0.2
3,467,050	+				+2.4
3,467,050	+				-1.3
3,467,051	-				-0.8
3,467,121	+				+0.1
3,467,122	-				-1.0
3,467,150	+				-1.0
3,467,151	-				-0.2
3,467,182	-		PFLU_RS15480	0.12	+0.4
3,467,203	+		PFLU_RS15480	0.14	-2.3
3,467,204	-		PFLU_RS15480	0.14	+0.1
3,467,204	-		PFLU_RS15480	0.14	-1.3
3,467,239	-		PFLU_RS15480	0.17	+0.7
3,467,265	+		PFLU_RS15480	0.19	+1.5
3,467,265	+		PFLU_RS15480	0.19	+3.2
3,467,265	+		PFLU_RS15480	0.19	-0.3
3,467,291	+		PFLU_RS15480	0.21	+2.9
3,467,291	+		PFLU_RS15480	0.21	-1.2
3,467,291	+		PFLU_RS15480	0.21	-0.0
3,467,291	+		PFLU_RS15480	0.21	-0.1
3,467,291	+		PFLU_RS15480	0.21	+1.3
3,467,292	-		PFLU_RS15480	0.21	-0.6
3,467,292	-		PFLU_RS15480	0.21	-0.5
3,467,292	-		PFLU_RS15480	0.21	-0.4
3,467,292	-		PFLU_RS15480	0.21	+1.6
3,467,292	-		PFLU_RS15480	0.21	-0.0
3,467,292	-		PFLU_RS15480	0.21	-0.5
3,467,292	-		PFLU_RS15480	0.21	-2.4
3,467,292	-		PFLU_RS15480	0.21	+1.8
3,467,311	+		PFLU_RS15480	0.23	+1.0
3,467,311	+		PFLU_RS15480	0.23	+0.4
3,467,311	+		PFLU_RS15480	0.23	+0.5
3,467,312	-		PFLU_RS15480	0.23	-2.2
3,467,414	+		PFLU_RS15480	0.31	+1.1
3,467,415	-		PFLU_RS15480	0.32	-2.0
3,467,415	-		PFLU_RS15480	0.32	-1.9
3,467,468	+		PFLU_RS15480	0.36	+0.4
3,467,468	+		PFLU_RS15480	0.36	+1.5
3,467,468	+		PFLU_RS15480	0.36	+0.3
3,467,468	+		PFLU_RS15480	0.36	-1.7
3,467,468	+		PFLU_RS15480	0.36	+0.9
3,467,469	-		PFLU_RS15480	0.36	+0.1
3,467,469	-		PFLU_RS15480	0.36	+0.0
3,467,469	-		PFLU_RS15480	0.36	-0.3
3,467,476	+		PFLU_RS15480	0.37	+1.2
3,467,476	+		PFLU_RS15480	0.37	+0.9
3,467,476	+		PFLU_RS15480	0.37	-1.0
3,467,490	+		PFLU_RS15480	0.38	-1.9
3,467,512	+		PFLU_RS15480	0.40	-0.4
3,467,512	+		PFLU_RS15480	0.40	+0.7
3,467,512	+		PFLU_RS15480	0.40	+1.3
3,467,512	+		PFLU_RS15480	0.40	+0.3
3,467,512	+		PFLU_RS15480	0.40	+0.8
3,467,513	-		PFLU_RS15480	0.40	-0.0
3,467,513	-		PFLU_RS15480	0.40	-0.0
3,467,513	-		PFLU_RS15480	0.40	-0.8
3,467,513	-		PFLU_RS15480	0.40	+0.6
3,467,513	-		PFLU_RS15480	0.40	+1.1
3,467,513	-		PFLU_RS15480	0.40	+1.9
3,467,517	+		PFLU_RS15480	0.40	-0.7
3,467,517	+		PFLU_RS15480	0.40	-1.0
3,467,517	+		PFLU_RS15480	0.40	-0.6
3,467,518	-		PFLU_RS15480	0.40	+0.5
3,467,518	-		PFLU_RS15480	0.40	+1.6
3,467,518	-		PFLU_RS15480	0.40	-0.1
3,467,518	-		PFLU_RS15480	0.40	-0.3
3,467,518	-		PFLU_RS15480	0.40	+0.3
3,467,558	+		PFLU_RS15480	0.43	+0.6
3,467,558	+		PFLU_RS15480	0.43	-1.3
3,467,558	+		PFLU_RS15480	0.43	+1.1
3,467,558	+		PFLU_RS15480	0.43	+0.5
3,467,558	+		PFLU_RS15480	0.43	+0.4
3,467,558	+		PFLU_RS15480	0.43	+1.0
3,467,558	+		PFLU_RS15480	0.43	+0.8
3,467,558	+		PFLU_RS15480	0.43	+0.7
3,467,559	-		PFLU_RS15480	0.43	+0.4
3,467,559	-		PFLU_RS15480	0.43	-1.5
3,467,559	-		PFLU_RS15480	0.43	-0.6
3,467,559	-		PFLU_RS15480	0.43	-0.6
3,467,604	+		PFLU_RS15480	0.47	+1.3
3,467,619	+		PFLU_RS15480	0.48	-0.4
3,467,619	+		PFLU_RS15480	0.48	-0.7
3,467,619	+		PFLU_RS15480	0.48	+1.9
3,467,619	+		PFLU_RS15480	0.48	+0.3
3,467,619	+		PFLU_RS15480	0.48	+0.7
3,467,619	+		PFLU_RS15480	0.48	+1.0
3,467,619	+		PFLU_RS15480	0.48	-0.1
3,467,619	+		PFLU_RS15480	0.48	+1.5
3,467,620	-		PFLU_RS15480	0.49	+1.3
3,467,620	-		PFLU_RS15480	0.49	+1.3
3,467,620	-		PFLU_RS15480	0.49	-2.2
3,467,620	-		PFLU_RS15480	0.49	-2.5
3,467,620	-		PFLU_RS15480	0.49	+0.5
3,467,620	-		PFLU_RS15480	0.49	+2.3
3,467,620	-		PFLU_RS15480	0.49	-1.9
3,467,620	-		PFLU_RS15480	0.49	-0.1
3,467,620	-		PFLU_RS15480	0.49	+0.2
3,467,620	-		PFLU_RS15480	0.49	+0.4
3,467,620	-		PFLU_RS15480	0.49	-2.6
3,467,620	-		PFLU_RS15480	0.49	-0.2
3,467,620	-		PFLU_RS15480	0.49	+1.9
3,467,620	-		PFLU_RS15480	0.49	+2.6
3,467,620	-		PFLU_RS15480	0.49	+1.7
3,467,620	-		PFLU_RS15480	0.49	-1.3
3,467,623	+		PFLU_RS15480	0.49	+0.7
3,467,623	+		PFLU_RS15480	0.49	-2.5
3,467,623	+		PFLU_RS15480	0.49	-2.0
3,467,623	+		PFLU_RS15480	0.49	-2.0
3,467,623	+		PFLU_RS15480	0.49	-1.3
3,467,623	+		PFLU_RS15480	0.49	-1.6
3,467,623	+		PFLU_RS15480	0.49	+0.4
3,467,623	+		PFLU_RS15480	0.49	+0.6
3,467,623	+		PFLU_RS15480	0.49	-2.6
3,467,623	+		PFLU_RS15480	0.49	-0.6
3,467,623	+		PFLU_RS15480	0.49	-1.9
3,467,623	+		PFLU_RS15480	0.49	-1.5
3,467,624	-		PFLU_RS15480	0.49	-0.9
3,467,624	-		PFLU_RS15480	0.49	+1.2
3,467,624	-		PFLU_RS15480	0.49	+1.6
3,467,624	-		PFLU_RS15480	0.49	-2.0
3,467,624	-		PFLU_RS15480	0.49	+0.3
3,467,624	-		PFLU_RS15480	0.49	+0.3
3,467,624	-		PFLU_RS15480	0.49	+0.9
3,467,624	-		PFLU_RS15480	0.49	-1.3
3,467,640	+		PFLU_RS15480	0.50	+2.4
3,467,640	+		PFLU_RS15480	0.50	-2.2
3,467,640	+		PFLU_RS15480	0.50	+1.3
3,467,640	+		PFLU_RS15480	0.50	-1.4
3,467,640	+		PFLU_RS15480	0.50	+0.9
3,467,641	-		PFLU_RS15480	0.50	-1.5
3,467,641	-		PFLU_RS15480	0.50	+0.6
3,467,641	-		PFLU_RS15480	0.50	-1.5
3,467,641	-		PFLU_RS15480	0.50	-0.4
3,467,641	-		PFLU_RS15480	0.50	-2.4
3,467,641	-		PFLU_RS15480	0.50	+1.7
3,467,641	-		PFLU_RS15480	0.50	-1.9
3,467,663	+		PFLU_RS15480	0.52	-0.3
3,467,663	+		PFLU_RS15480	0.52	+0.6
3,467,695	+		PFLU_RS15480	0.55	-2.3
3,467,696	-		PFLU_RS15480	0.55	+0.3
3,467,696	-		PFLU_RS15480	0.55	-0.5
3,467,696	-		PFLU_RS15480	0.55	+1.6
3,467,698	-		PFLU_RS15480	0.55	-1.9
3,467,698	-		PFLU_RS15480	0.55	+1.0
3,467,698	-		PFLU_RS15480	0.55	-3.2
3,467,868	+		PFLU_RS15480	0.69	-0.3
3,467,868	+		PFLU_RS15480	0.69	+0.1
3,467,868	+		PFLU_RS15480	0.69	-2.0
3,467,868	+		PFLU_RS15480	0.69	-0.3
3,467,973	+		PFLU_RS15480	0.78	+4.1
3,467,973	+		PFLU_RS15480	0.78	+1.0
3,467,974	-		PFLU_RS15480	0.78	-2.2
3,468,038	+		PFLU_RS15480	0.83	+0.5
3,468,038	+		PFLU_RS15480	0.83	-1.5
3,468,038	+		PFLU_RS15480	0.83	+1.3
3,468,038	+		PFLU_RS15480	0.83	+0.4
3,468,039	-		PFLU_RS15480	0.83	-2.4
3,468,039	-		PFLU_RS15480	0.83	+0.6
3,468,039	-		PFLU_RS15480	0.83	+0.6
3,468,039	-		PFLU_RS15480	0.83	-0.1
3,468,265	+				-0.0
3,468,265	+				+2.0
3,468,265	+				+1.1
3,468,265	+				-1.6
3,468,265	+				-2.2
3,468,265	+				-1.7
3,468,265	+				+0.8
3,468,266	-				-0.6
3,468,280	-				-0.0
3,468,280	-				+0.6
3,468,300	+				-2.0
3,468,301	-				+0.3
3,468,301	-				+1.7
3,468,308	+				-1.4
3,468,308	+				+0.8
3,468,308	+				-0.7
3,468,309	-				-1.0
3,468,309	-				-0.5
3,468,309	-				+1.3
3,468,310	+				-0.2
3,468,310	+				-1.2
3,468,310	+				-1.7
3,468,310	+				+1.6
3,468,310	+				+1.6
3,468,310	+				-1.8
3,468,310	+				-2.6
3,468,310	+				-0.7
3,468,310	+				+0.9
3,468,310	+				+0.3
3,468,310	+				+0.0
3,468,310	+				-1.2
3,468,311	-				+0.4
3,468,311	-				+0.2
3,468,311	-				+0.3
3,468,311	-				+0.9
3,468,311	-				-0.3
3,468,311	-				+1.0
3,468,311	-				+0.5
3,468,311	-				+0.7
3,468,311	-				+0.9
3,468,311	-				-1.9
3,468,311	-				-0.3
3,468,311	-				-0.2
3,468,311	-				+0.1
3,468,311	-				-0.7
3,468,311	-				-2.2
3,468,311	-				-0.6
3,468,311	-				+0.5
3,468,311	-				+0.7
3,468,311	-				-0.9
3,468,311	-				+0.0
3,468,311	-				-1.6
3,468,311	-				-2.2
3,468,311	-				-0.3
3,468,312	+				-2.2
3,468,312	+				+1.6
3,468,312	+				+2.2
3,468,312	+				-1.0
3,468,312	+				-0.1
3,468,312	+				+1.3
3,468,312	+				+1.3
3,468,312	+				-1.1
3,468,312	+				-1.5
3,468,312	+				+0.2
3,468,312	+				+0.2
3,468,312	+				-2.7
3,468,312	+				-1.0
3,468,313	-				+1.0
3,468,313	-				-3.1
3,468,313	-				+1.0
3,468,313	-				+0.3
3,468,313	-				-0.3
3,468,313	-				-1.9
3,468,313	-				-2.8
3,468,313	-				+1.8
3,468,313	-				+0.6
3,468,313	-				+3.9
3,468,313	-				-0.3
3,468,313	-				-0.3
3,468,313	-				+2.9
3,468,433	-				-0.5
3,468,444	+				-0.4
3,468,445	-				+2.4
3,468,449	+				+0.6
3,468,533	+				-1.3
3,468,533	+				-1.3
3,468,533	+				-0.5
3,468,533	+				-2.2
3,468,533	+				-0.9
3,468,533	+				+0.5
3,468,533	+				+0.7
3,468,533	+				+0.6
3,468,533	+				+0.7
3,468,533	+				+0.1
3,468,533	+				-0.6
3,468,533	+				+1.0
3,468,533	+				-2.3
3,468,533	+				+0.4
3,468,533	+				-2.7
3,468,533	+				+0.1
3,468,533	+				+1.0
3,468,533	+				+0.7
3,468,533	+				-0.5
3,468,533	+				+0.4
3,468,533	+				+1.3
3,468,533	+				+0.3
3,468,533	+				-1.7
3,468,533	+				-2.4
3,468,533	+				-2.2
3,468,533	+				+0.5
3,468,533	+				+1.8
3,468,533	+				+0.6
3,468,533	+				+1.9
3,468,533	+				+0.9
3,468,534	-				+0.2
3,468,534	-				+0.5
3,468,534	-				+0.3
3,468,534	-				+0.6
3,468,534	-				-1.3
3,468,534	-				+4.3
3,468,534	-				+1.8
3,468,534	-				-1.9
3,468,534	-				-0.3
3,468,534	-				-1.0
3,468,534	-				-2.3
3,468,534	-				-1.0
3,468,534	-				-3.4
3,468,534	-				-2.7
3,468,534	-				-0.0
3,468,534	-				-1.3
3,468,534	-				-1.7
3,468,534	-				-1.0
3,468,534	-				+0.1
3,468,534	-				-0.7
3,468,534	-				+1.3
3,468,534	-				-1.9
3,468,534	-				+0.7
3,468,534	-				-2.4
3,468,534	-				+0.3
3,468,625	+		PFLU_RS15485	0.14	+1.3
3,468,625	+		PFLU_RS15485	0.14	-1.7
3,468,626	-		PFLU_RS15485	0.14	-1.7
3,468,627	+		PFLU_RS15485	0.14	+0.8
3,468,627	+		PFLU_RS15485	0.14	-1.0
3,468,627	+		PFLU_RS15485	0.14	+0.6
3,468,627	+		PFLU_RS15485	0.14	+0.8
3,468,628	-		PFLU_RS15485	0.14	-0.2
3,468,628	-		PFLU_RS15485	0.14	-1.0
3,468,628	-		PFLU_RS15485	0.14	+1.3
3,468,628	-		PFLU_RS15485	0.14	+0.2
3,468,740	+		PFLU_RS15485	0.31	+2.3
3,468,741	-		PFLU_RS15485	0.31	+0.6
3,468,860	+		PFLU_RS15485	0.49	-0.4
3,468,860	+		PFLU_RS15485	0.49	+0.6
3,468,860	+		PFLU_RS15485	0.49	-0.3
3,468,861	-		PFLU_RS15485	0.49	-1.3
3,468,924	+		PFLU_RS15485	0.58	-0.9
3,468,924	+		PFLU_RS15485	0.58	-2.2
3,468,924	+		PFLU_RS15485	0.58	-1.3
3,468,925	-		PFLU_RS15485	0.58	-2.5
3,468,925	-		PFLU_RS15485	0.58	-1.5
3,468,925	-		PFLU_RS15485	0.58	-0.6
3,468,925	-		PFLU_RS15485	0.58	-0.9
3,468,973	+		PFLU_RS15485	0.65	+0.8
3,468,973	+		PFLU_RS15485	0.65	+0.0
3,468,973	+		PFLU_RS15485	0.65	+0.4
3,468,974	-		PFLU_RS15485	0.65	-0.1
3,468,974	-		PFLU_RS15485	0.65	-0.0
3,468,974	-		PFLU_RS15485	0.65	+2.3
3,468,974	-		PFLU_RS15485	0.65	-1.1
3,469,190	+				-0.4
3,469,191	-				+1.9
3,469,191	-				-1.0
3,469,230	+				-0.5
3,469,230	+				+1.3
3,469,230	+				-2.3
3,469,231	-				-0.2