Experiment: L-Ornithine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS02390 and PFLU_RS02395 are separated by 774 nucleotides PFLU_RS02395 and PFLU_RS02400 are separated by 41 nucleotides PFLU_RS02400 and PFLU_RS02405 overlap by 4 nucleotides
PFLU_RS02390: PFLU_RS02390 - NAD-dependent epimerase/dehydratase family protein, at 548,779 to 549,705
_RS02390
PFLU_RS02395: PFLU_RS02395 - hypothetical protein, at 550,480 to 551,439
_RS02395
PFLU_RS02400: PFLU_RS02400 - aldo/keto reductase, at 551,481 to 552,293
_RS02400
PFLU_RS02405: PFLU_RS02405 - FAD-dependent oxidoreductase, at 552,290 to 553,465
_RS02405
Position (kb) 550
551
552 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 549.716 kb on - strand at 549.716 kb on - strand at 549.716 kb on - strand at 549.716 kb on - strand at 549.716 kb on - strand at 549.716 kb on - strand at 549.716 kb on - strand at 549.716 kb on - strand at 549.716 kb on - strand at 549.842 kb on + strand at 549.924 kb on + strand at 549.924 kb on + strand at 549.924 kb on + strand at 549.925 kb on - strand at 550.051 kb on + strand at 550.051 kb on + strand at 550.051 kb on + strand at 550.051 kb on + strand at 550.060 kb on + strand at 550.133 kb on + strand at 550.133 kb on + strand at 550.133 kb on + strand at 550.133 kb on + strand at 550.133 kb on + strand at 550.133 kb on + strand at 550.133 kb on + strand at 550.133 kb on + strand at 550.133 kb on + strand at 550.134 kb on - strand at 550.134 kb on - strand at 550.134 kb on - strand at 550.134 kb on - strand at 550.134 kb on - strand at 550.193 kb on + strand at 550.194 kb on - strand at 550.194 kb on - strand at 550.194 kb on - strand at 550.201 kb on - strand at 550.201 kb on - strand at 550.201 kb on - strand at 550.201 kb on - strand at 550.201 kb on - strand at 550.201 kb on - strand at 550.308 kb on + strand at 550.343 kb on - strand at 550.343 kb on - strand at 550.343 kb on - strand at 550.343 kb on - strand at 550.343 kb on - strand at 550.343 kb on - strand at 550.343 kb on - strand at 550.469 kb on + strand at 550.469 kb on + strand at 550.469 kb on + strand at 550.469 kb on + strand at 550.469 kb on + strand at 550.469 kb on + strand at 550.470 kb on - strand at 550.470 kb on - strand at 550.540 kb on + strand at 550.540 kb on + strand at 550.540 kb on + strand at 550.541 kb on - strand at 550.655 kb on + strand, within PFLU_RS02395 at 550.655 kb on + strand, within PFLU_RS02395 at 550.655 kb on + strand, within PFLU_RS02395 at 550.655 kb on + strand, within PFLU_RS02395 at 550.655 kb on + strand, within PFLU_RS02395 at 550.655 kb on + strand, within PFLU_RS02395 at 550.655 kb on + strand, within PFLU_RS02395 at 550.655 kb on + strand, within PFLU_RS02395 at 550.655 kb on + strand, within PFLU_RS02395 at 550.656 kb on - strand, within PFLU_RS02395 at 550.656 kb on - strand, within PFLU_RS02395 at 550.656 kb on - strand, within PFLU_RS02395 at 550.656 kb on - strand, within PFLU_RS02395 at 550.656 kb on - strand, within PFLU_RS02395 at 550.656 kb on - strand, within PFLU_RS02395 at 550.656 kb on - strand, within PFLU_RS02395 at 550.656 kb on - strand, within PFLU_RS02395 at 550.656 kb on - strand, within PFLU_RS02395 at 550.656 kb on - strand, within PFLU_RS02395 at 550.679 kb on + strand, within PFLU_RS02395 at 550.679 kb on + strand, within PFLU_RS02395 at 550.680 kb on - strand, within PFLU_RS02395 at 550.703 kb on + strand, within PFLU_RS02395 at 550.703 kb on + strand, within PFLU_RS02395 at 550.745 kb on + strand, within PFLU_RS02395 at 550.745 kb on + strand, within PFLU_RS02395 at 550.746 kb on - strand, within PFLU_RS02395 at 550.746 kb on - strand, within PFLU_RS02395 at 550.746 kb on - strand, within PFLU_RS02395 at 550.862 kb on + strand, within PFLU_RS02395 at 550.862 kb on + strand, within PFLU_RS02395 at 550.863 kb on - strand, within PFLU_RS02395 at 550.863 kb on - strand, within PFLU_RS02395 at 550.863 kb on - strand, within PFLU_RS02395 at 550.898 kb on + strand, within PFLU_RS02395 at 550.898 kb on + strand, within PFLU_RS02395 at 550.898 kb on + strand, within PFLU_RS02395 at 550.898 kb on + strand, within PFLU_RS02395 at 550.898 kb on + strand, within PFLU_RS02395 at 550.899 kb on - strand, within PFLU_RS02395 at 550.899 kb on - strand, within PFLU_RS02395 at 550.899 kb on - strand, within PFLU_RS02395 at 550.899 kb on - strand, within PFLU_RS02395 at 550.899 kb on - strand, within PFLU_RS02395 at 550.899 kb on - strand, within PFLU_RS02395 at 550.899 kb on - strand, within PFLU_RS02395 at 550.899 kb on - strand, within PFLU_RS02395 at 550.899 kb on - strand, within PFLU_RS02395 at 550.899 kb on - strand, within PFLU_RS02395 at 550.899 kb on - strand, within PFLU_RS02395 at 550.899 kb on - strand, within PFLU_RS02395 at 550.899 kb on - strand, within PFLU_RS02395 at 551.012 kb on + strand, within PFLU_RS02395 at 551.071 kb on + strand, within PFLU_RS02395 at 551.071 kb on + strand, within PFLU_RS02395 at 551.071 kb on + strand, within PFLU_RS02395 at 551.072 kb on - strand, within PFLU_RS02395 at 551.072 kb on - strand, within PFLU_RS02395 at 551.072 kb on - strand, within PFLU_RS02395 at 551.142 kb on - strand, within PFLU_RS02395 at 551.142 kb on - strand, within PFLU_RS02395 at 551.208 kb on - strand, within PFLU_RS02395 at 551.208 kb on - strand, within PFLU_RS02395 at 551.208 kb on - strand, within PFLU_RS02395 at 551.208 kb on - strand, within PFLU_RS02395 at 551.208 kb on - strand, within PFLU_RS02395 at 551.208 kb on - strand, within PFLU_RS02395 at 551.208 kb on - strand, within PFLU_RS02395 at 551.354 kb on + strand at 551.354 kb on + strand at 551.354 kb on + strand at 551.355 kb on - strand at 551.355 kb on - strand at 551.355 kb on - strand at 551.355 kb on - strand at 551.355 kb on - strand at 551.355 kb on - strand at 551.400 kb on + strand at 551.400 kb on + strand at 551.400 kb on + strand at 551.401 kb on - strand at 551.422 kb on + strand at 551.422 kb on + strand at 551.423 kb on - strand at 551.423 kb on - strand at 551.423 kb on - strand at 552.286 kb on - strand at 552.318 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Ornithine 10 mM (C) remove 549,716 - +0.5 549,716 - -0.6 549,716 - -0.7 549,716 - +1.4 549,716 - -1.9 549,716 - +1.6 549,716 - +1.2 549,716 - +0.2 549,716 - +0.8 549,842 + +0.1 549,924 + -1.2 549,924 + -0.3 549,924 + +0.1 549,925 - -1.3 550,051 + +0.4 550,051 + +0.2 550,051 + -0.2 550,051 + +2.0 550,060 + +0.6 550,133 + +0.6 550,133 + -1.9 550,133 + -3.0 550,133 + +1.1 550,133 + -0.3 550,133 + +0.4 550,133 + -0.1 550,133 + -1.0 550,133 + +1.4 550,134 - -2.0 550,134 - -0.9 550,134 - +0.8 550,134 - -0.0 550,134 - -2.3 550,193 + +0.8 550,194 - -2.2 550,194 - +2.8 550,194 - +0.1 550,201 - -0.6 550,201 - -0.8 550,201 - +0.2 550,201 - -0.2 550,201 - +0.5 550,201 - -0.7 550,308 + +1.8 550,343 - -1.5 550,343 - +1.1 550,343 - +1.1 550,343 - +1.8 550,343 - +0.3 550,343 - -0.5 550,343 - -0.5 550,469 + -1.3 550,469 + -1.6 550,469 + -0.2 550,469 + -0.3 550,469 + +0.2 550,469 + +0.2 550,470 - -1.2 550,470 - +0.8 550,540 + -0.2 550,540 + -1.5 550,540 + -2.8 550,541 - +0.4 550,655 + PFLU_RS02395 0.18 -0.5 550,655 + PFLU_RS02395 0.18 -1.8 550,655 + PFLU_RS02395 0.18 -0.8 550,655 + PFLU_RS02395 0.18 -0.2 550,655 + PFLU_RS02395 0.18 -0.2 550,655 + PFLU_RS02395 0.18 -1.5 550,655 + PFLU_RS02395 0.18 -0.0 550,655 + PFLU_RS02395 0.18 -1.9 550,655 + PFLU_RS02395 0.18 +0.4 550,656 - PFLU_RS02395 0.18 -0.5 550,656 - PFLU_RS02395 0.18 -0.3 550,656 - PFLU_RS02395 0.18 -2.2 550,656 - PFLU_RS02395 0.18 -0.9 550,656 - PFLU_RS02395 0.18 +1.8 550,656 - PFLU_RS02395 0.18 -2.5 550,656 - PFLU_RS02395 0.18 -1.1 550,656 - PFLU_RS02395 0.18 +0.5 550,656 - PFLU_RS02395 0.18 -3.4 550,656 - PFLU_RS02395 0.18 +0.1 550,679 + PFLU_RS02395 0.21 +0.8 550,679 + PFLU_RS02395 0.21 -2.3 550,680 - PFLU_RS02395 0.21 +0.8 550,703 + PFLU_RS02395 0.23 -1.5 550,703 + PFLU_RS02395 0.23 -1.0 550,745 + PFLU_RS02395 0.28 -1.8 550,745 + PFLU_RS02395 0.28 -1.6 550,746 - PFLU_RS02395 0.28 -2.7 550,746 - PFLU_RS02395 0.28 +0.8 550,746 - PFLU_RS02395 0.28 -1.3 550,862 + PFLU_RS02395 0.40 -0.8 550,862 + PFLU_RS02395 0.40 -0.9 550,863 - PFLU_RS02395 0.40 -0.8 550,863 - PFLU_RS02395 0.40 -1.9 550,863 - PFLU_RS02395 0.40 -1.9 550,898 + PFLU_RS02395 0.44 -2.6 550,898 + PFLU_RS02395 0.44 -0.1 550,898 + PFLU_RS02395 0.44 -1.5 550,898 + PFLU_RS02395 0.44 +0.2 550,898 + PFLU_RS02395 0.44 -1.4 550,899 - PFLU_RS02395 0.44 +1.1 550,899 - PFLU_RS02395 0.44 -2.0 550,899 - PFLU_RS02395 0.44 -2.8 550,899 - PFLU_RS02395 0.44 -1.2 550,899 - PFLU_RS02395 0.44 -1.8 550,899 - PFLU_RS02395 0.44 -2.6 550,899 - PFLU_RS02395 0.44 -0.1 550,899 - PFLU_RS02395 0.44 -1.8 550,899 - PFLU_RS02395 0.44 -2.1 550,899 - PFLU_RS02395 0.44 -0.6 550,899 - PFLU_RS02395 0.44 -1.5 550,899 - PFLU_RS02395 0.44 -0.2 550,899 - PFLU_RS02395 0.44 -0.8 551,012 + PFLU_RS02395 0.55 +0.8 551,071 + PFLU_RS02395 0.62 -1.6 551,071 + PFLU_RS02395 0.62 +0.2 551,071 + PFLU_RS02395 0.62 -2.1 551,072 - PFLU_RS02395 0.62 -2.3 551,072 - PFLU_RS02395 0.62 +0.2 551,072 - PFLU_RS02395 0.62 -0.5 551,142 - PFLU_RS02395 0.69 -0.9 551,142 - PFLU_RS02395 0.69 -1.9 551,208 - PFLU_RS02395 0.76 +0.3 551,208 - PFLU_RS02395 0.76 -2.0 551,208 - PFLU_RS02395 0.76 -1.0 551,208 - PFLU_RS02395 0.76 -0.5 551,208 - PFLU_RS02395 0.76 +1.8 551,208 - PFLU_RS02395 0.76 +1.3 551,208 - PFLU_RS02395 0.76 -2.0 551,354 + +1.5 551,354 + -1.8 551,354 + -1.0 551,355 - -1.9 551,355 - -2.2 551,355 - -0.5 551,355 - -1.9 551,355 - +0.8 551,355 - -2.0 551,400 + -1.0 551,400 + -0.2 551,400 + -2.0 551,401 - +0.8 551,422 + -1.0 551,422 + +0.7 551,423 - -2.9 551,423 - -1.2 551,423 - +0.0 552,286 - +1.9 552,318 - -1.0
Or see this region's nucleotide sequence