Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08905

Experiment: L-Ornithine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Ornithine 10 mM (C)
1,972,471	+		PFLU_RS08900	0.42	-0.2
1,972,472	-		PFLU_RS08900	0.42	+0.6
1,972,472	-		PFLU_RS08900	0.42	+0.6
1,972,501	+		PFLU_RS08900	0.44	-0.2
1,972,501	+		PFLU_RS08900	0.44	+0.4
1,972,501	+		PFLU_RS08900	0.44	-1.9
1,972,501	+		PFLU_RS08900	0.44	-1.5
1,972,501	+		PFLU_RS08900	0.44	+1.2
1,972,502	-		PFLU_RS08900	0.44	+0.3
1,972,502	-		PFLU_RS08900	0.44	+1.9
1,972,502	-		PFLU_RS08900	0.44	+0.2
1,972,573	+		PFLU_RS08900	0.49	+1.2
1,972,573	+		PFLU_RS08900	0.49	+0.3
1,972,573	+		PFLU_RS08900	0.49	-0.6
1,972,573	+		PFLU_RS08900	0.49	+0.4
1,972,573	+		PFLU_RS08900	0.49	-1.6
1,972,573	+		PFLU_RS08900	0.49	-0.2
1,972,573	+		PFLU_RS08900	0.49	+0.8
1,972,573	+		PFLU_RS08900	0.49	-1.2
1,972,574	-		PFLU_RS08900	0.50	-1.5
1,972,574	-		PFLU_RS08900	0.50	-1.6
1,972,574	-		PFLU_RS08900	0.50	-0.3
1,972,574	-		PFLU_RS08900	0.50	-1.4
1,972,574	-		PFLU_RS08900	0.50	+0.6
1,972,574	-		PFLU_RS08900	0.50	-1.4
1,972,574	-		PFLU_RS08900	0.50	-1.2
1,972,679	-		PFLU_RS08900	0.58	+0.2
1,972,690	+		PFLU_RS08900	0.59	+1.2
1,972,690	+		PFLU_RS08900	0.59	-1.6
1,972,690	+		PFLU_RS08900	0.59	-0.1
1,972,690	+		PFLU_RS08900	0.59	-0.4
1,972,690	+		PFLU_RS08900	0.59	+0.2
1,972,690	+		PFLU_RS08900	0.59	-0.7
1,972,691	-		PFLU_RS08900	0.59	-2.0
1,972,691	-		PFLU_RS08900	0.59	-0.2
1,972,747	+		PFLU_RS08900	0.63	-0.1
1,972,747	+		PFLU_RS08900	0.63	+1.2
1,972,747	+		PFLU_RS08900	0.63	+0.3
1,972,747	+		PFLU_RS08900	0.63	+0.6
1,972,747	+		PFLU_RS08900	0.63	-1.2
1,972,747	+		PFLU_RS08900	0.63	-1.2
1,972,747	+		PFLU_RS08900	0.63	+1.2
1,972,748	-		PFLU_RS08900	0.63	+0.2
1,972,748	-		PFLU_RS08900	0.63	-1.6
1,972,748	-		PFLU_RS08900	0.63	+3.7
1,972,748	-		PFLU_RS08900	0.63	-1.5
1,972,849	+		PFLU_RS08900	0.71	+1.6
1,972,861	+		PFLU_RS08900	0.72	-0.8
1,972,861	+		PFLU_RS08900	0.72	-0.5
1,972,861	+		PFLU_RS08900	0.72	-0.0
1,972,861	+		PFLU_RS08900	0.72	+2.4
1,972,861	+		PFLU_RS08900	0.72	-1.5
1,972,861	+		PFLU_RS08900	0.72	-0.4
1,972,861	+		PFLU_RS08900	0.72	-0.8
1,972,862	-		PFLU_RS08900	0.72	-1.2
1,972,862	-		PFLU_RS08900	0.72	-1.8
1,972,862	-		PFLU_RS08900	0.72	-0.0
1,972,862	-		PFLU_RS08900	0.72	-1.0
1,972,864	+		PFLU_RS08900	0.72	-1.4
1,972,864	+		PFLU_RS08900	0.72	-1.5
1,972,864	+		PFLU_RS08900	0.72	-1.4
1,972,864	+		PFLU_RS08900	0.72	+0.8
1,972,864	+		PFLU_RS08900	0.72	+0.6
1,972,864	+		PFLU_RS08900	0.72	-1.2
1,972,864	+		PFLU_RS08900	0.72	-1.2
1,972,864	+		PFLU_RS08900	0.72	-2.8
1,972,865	-		PFLU_RS08900	0.72	-0.6
1,972,865	-		PFLU_RS08900	0.72	-0.1
1,972,865	-		PFLU_RS08900	0.72	+0.6
1,972,865	-		PFLU_RS08900	0.72	+0.1
1,972,865	-		PFLU_RS08900	0.72	-0.2
1,972,865	-		PFLU_RS08900	0.72	+1.2
1,972,880	-		PFLU_RS08900	0.73	+0.9
1,972,880	-		PFLU_RS08900	0.73	-1.0
1,972,966	+		PFLU_RS08900	0.80	-0.3
1,972,966	+		PFLU_RS08900	0.80	+1.8
1,972,967	-		PFLU_RS08900	0.80	+0.6
1,972,967	-		PFLU_RS08900	0.80	-0.8
1,973,038	+		PFLU_RS08900	0.85	-0.0
1,973,038	+		PFLU_RS08900	0.85	-0.2
1,973,038	+		PFLU_RS08900	0.85	+0.8
1,973,038	+		PFLU_RS08900	0.85	+1.4
1,973,038	+		PFLU_RS08900	0.85	-0.1
1,973,038	+		PFLU_RS08900	0.85	-1.4
1,973,039	-		PFLU_RS08900	0.85	+0.6
1,973,039	-		PFLU_RS08900	0.85	-2.2
1,973,039	-		PFLU_RS08900	0.85	+0.1
1,973,039	-		PFLU_RS08900	0.85	+2.2
1,973,039	-		PFLU_RS08900	0.85	-0.4
1,973,039	-		PFLU_RS08900	0.85	-0.9
1,973,039	-		PFLU_RS08900	0.85	-0.4
1,973,039	-		PFLU_RS08900	0.85	-1.4
1,973,105	+				+2.7
1,973,140	+				+0.6
1,973,140	+				-0.1
1,973,140	+				-0.5
1,973,140	+				+0.2
1,973,140	+				-2.4
1,973,140	+				-0.2
1,973,140	+				-2.0
1,973,140	+				-1.2
1,973,140	+				-1.0
1,973,140	+				-0.7
1,973,140	+				+1.2
1,973,140	+				-0.2
1,973,141	-				-0.6
1,973,141	-				-0.8
1,973,141	-				+2.2
1,973,141	-				-1.5
1,973,141	-				-0.2
1,973,141	-				+1.7
1,973,141	-				-1.2
1,973,200	-				+0.2
1,973,200	-				+0.6
1,973,233	+				+0.0
1,973,233	+				-0.9
1,973,234	-				-1.4
1,973,234	-				-0.6
1,973,234	-				+0.6
1,973,234	-				+0.2
1,973,234	-				-0.8
1,973,234	-				+0.2
1,973,234	-				+0.9
1,973,234	-				+0.3
1,973,234	-				-0.4
1,973,240	+				+0.4
1,973,241	-				-1.6
1,973,241	-				+1.7
1,973,256	+				-2.2
1,973,256	+				-0.8
1,973,256	+				-0.1
1,973,256	+				+1.6
1,973,256	+				-0.1
1,973,256	+				+1.6
1,973,256	+				-0.1
1,973,257	-				-0.2
1,973,257	-				-1.6
1,973,257	-				+0.3
1,973,273	+				+0.4
1,973,273	+				-1.7
1,973,273	+				+1.1
1,973,274	-				+1.4
1,973,274	-				+1.3
1,973,345	+				+0.4
1,973,345	+				+0.4
1,973,348	+				-1.8
1,973,348	+				-1.7
1,973,348	+				+1.6
1,973,348	+				-0.6
1,973,348	+				+1.0
1,973,348	+				+0.3
1,973,348	+				-0.3
1,973,348	+				-2.3
1,973,348	+				-1.3
1,973,348	+				+1.3
1,973,348	+				+0.2
1,973,348	+				+0.2
1,973,348	+				+0.2
1,973,348	+				+0.5
1,973,348	+				-1.3
1,973,348	+				-1.1
1,973,348	+				-1.9
1,973,348	+				-0.8
1,973,348	+				-1.4
1,973,348	+				-1.4
1,973,348	+				+1.4
1,973,348	+				-0.2
1,973,348	+				-1.5
1,973,348	+				+1.5
1,973,348	+				-1.4
1,973,348	+				+2.2
1,973,348	+				+0.5
1,973,348	+				-0.4
1,973,348	+				-0.5
1,973,349	-				-2.0
1,973,349	-				+0.6
1,973,349	-				+0.9
1,973,349	-				-1.3
1,973,349	-				+0.4
1,973,349	-				+1.2
1,973,349	-				-0.1
1,973,349	-				+1.2
1,973,349	-				-0.2
1,973,349	-				-1.5
1,973,349	-				-0.1
1,973,349	-				+0.7
1,973,349	-				+1.9
1,973,349	-				+2.2
1,973,349	-				+0.7
1,973,349	-				-0.6
1,973,349	-				-0.6
1,973,349	-				+1.2
1,973,352	-				+0.0
1,973,363	-				-0.2
1,973,378	+				-1.2
1,973,378	+				-0.1
1,973,378	+				-1.2
1,973,378	+				-1.3
1,973,378	+				-2.0
1,973,378	+				-0.4
1,973,378	+				+1.7
1,973,379	-				+0.4
1,973,379	-				-0.3
1,973,379	-				+1.4
1,973,379	-				-0.6
1,973,379	-				-1.5
1,973,379	-				+1.8
1,973,379	-				-1.9
1,973,379	-				-1.5
1,973,389	+				-0.9
1,973,389	+				-1.4
1,973,389	+				+0.2
1,973,389	+				-0.4
1,973,389	+				+1.2
1,973,389	+				+0.3
1,973,389	+				-0.3
1,973,390	-				+0.9
1,973,390	-				+0.5
1,973,390	-				+1.4
1,973,390	-				+0.8
1,973,390	-				-1.0
1,973,390	-				-0.6
1,973,390	-				-1.1
1,973,390	-				-0.5
1,973,390	-				-1.1
1,973,397	+				+0.8
1,973,397	+				-0.2
1,973,397	+				+1.7
1,973,397	+				-0.8
1,973,397	+				+2.2
1,973,397	+				+0.7
1,973,397	+				+0.8
1,973,397	+				+0.2
1,973,397	+				+1.2
1,973,397	+				+0.6
1,973,397	+				+0.2
1,973,397	+				-1.3
1,973,397	+				-0.0
1,973,397	+				-0.2
1,973,397	+				+1.2
1,973,397	+				-0.4
1,973,397	+				-2.3
1,973,397	+				+0.8
1,973,397	+				+1.5
1,973,397	+				+0.8
1,973,397	+				-0.6
1,973,397	+				+1.7
1,973,398	-				+2.2
1,973,398	-				+0.9
1,973,398	-				-1.9
1,973,398	-				+0.7
1,973,398	-				+0.0
1,973,398	-				+2.2
1,973,398	-				-1.6
1,973,398	-				+0.5
1,973,398	-				-0.2
1,973,398	-				-2.6
1,973,398	-				+1.2
1,973,398	-				+2.9
1,973,398	-				-0.4
1,973,399	+				-0.2
1,973,399	+				-1.6
1,973,399	+				-1.4
1,973,399	+				-1.5
1,973,399	+				+1.4
1,973,399	+				-0.9
1,973,400	-				+0.5
1,973,400	-				+0.7
1,973,400	-				+2.2
1,973,411	+				-0.5
1,973,411	+				+0.2
1,973,411	+				+0.6
1,973,411	+				-0.2
1,973,412	-				+0.2
1,973,412	-				-0.6
1,973,412	-				+2.4
1,973,430	-				-1.7
1,973,430	-				-0.6
1,973,511	+		PFLU_RS08905	0.12	+2.0
1,973,512	-		PFLU_RS08905	0.13	+0.4
1,973,528	+		PFLU_RS08905	0.17	+1.9
1,973,528	+		PFLU_RS08905	0.17	+0.5
1,973,528	+		PFLU_RS08905	0.17	+0.4
1,973,529	-		PFLU_RS08905	0.17	-1.0
1,973,529	-		PFLU_RS08905	0.17	+0.4
1,973,529	-		PFLU_RS08905	0.17	+1.4
1,973,541	-		PFLU_RS08905	0.21	+2.7
1,973,759	+		PFLU_RS08905	0.80	-1.1
1,973,759	+		PFLU_RS08905	0.80	+0.6
1,973,759	+		PFLU_RS08905	0.80	-0.4
1,973,759	+		PFLU_RS08905	0.80	-0.4
1,973,759	+		PFLU_RS08905	0.80	-0.5
1,973,759	+		PFLU_RS08905	0.80	-0.3
1,973,759	+		PFLU_RS08905	0.80	+0.4
1,973,759	+		PFLU_RS08905	0.80	-0.3
1,973,759	+		PFLU_RS08905	0.80	+0.4
1,973,759	+		PFLU_RS08905	0.80	+0.9
1,973,759	+		PFLU_RS08905	0.80	-0.8
1,973,760	-		PFLU_RS08905	0.80	-0.3
1,973,760	-		PFLU_RS08905	0.80	+1.2
1,973,760	-		PFLU_RS08905	0.80	+0.9
1,973,760	-		PFLU_RS08905	0.80	-0.2
1,973,760	-		PFLU_RS08905	0.80	+2.7
1,973,916	+				-0.3
1,973,916	+				+0.2
1,973,917	-				-0.4
1,974,015	+				-1.2
1,974,016	-				-0.4
1,974,016	-				-1.0
1,974,016	-				-0.5
1,974,016	-				-0.3
1,974,046	+				+0.8
1,974,046	+				-1.2
1,974,046	+				-1.1
1,974,046	+				-0.6
1,974,046	+				-1.3
1,974,047	-				-1.7
1,974,047	-				-0.8
1,974,047	-				-2.0
1,974,099	+		PFLU_RS08910	0.12	-0.3
1,974,100	-		PFLU_RS08910	0.12	+0.4
1,974,100	-		PFLU_RS08910	0.12	-1.2
1,974,100	-		PFLU_RS08910	0.12	-0.1
1,974,100	-		PFLU_RS08910	0.12	-1.7
1,974,116	+		PFLU_RS08910	0.13	-1.3
1,974,116	+		PFLU_RS08910	0.13	-0.0
1,974,116	+		PFLU_RS08910	0.13	-1.2
1,974,116	+		PFLU_RS08910	0.13	+0.6
1,974,116	+		PFLU_RS08910	0.13	+1.9
1,974,117	-		PFLU_RS08910	0.13	+0.5
1,974,117	-		PFLU_RS08910	0.13	-0.4
1,974,443	+		PFLU_RS08910	0.34	+0.2
1,974,443	+		PFLU_RS08910	0.34	-0.8
1,974,443	+		PFLU_RS08910	0.34	+0.2
1,974,443	+		PFLU_RS08910	0.34	-0.4
1,974,444	-		PFLU_RS08910	0.34	-0.4
1,974,444	-		PFLU_RS08910	0.34	+0.3
1,974,510	+		PFLU_RS08910	0.38	-0.4
1,974,510	+		PFLU_RS08910	0.38	+1.1
1,974,511	-		PFLU_RS08910	0.38	+0.5
1,974,511	-		PFLU_RS08910	0.38	-2.2
1,974,579	+		PFLU_RS08910	0.43	-1.7
1,974,642	+		PFLU_RS08910	0.47	-0.7
1,974,642	+		PFLU_RS08910	0.47	+0.1
1,974,643	-		PFLU_RS08910	0.47	+0.6
1,974,643	-		PFLU_RS08910	0.47	-1.7
1,974,643	-		PFLU_RS08910	0.47	-1.0
1,974,643	-		PFLU_RS08910	0.47	-0.9
1,974,815	+		PFLU_RS08910	0.58	-0.2
1,974,815	+		PFLU_RS08910	0.58	+0.1
1,974,815	+		PFLU_RS08910	0.58	-1.2
1,974,815	+		PFLU_RS08910	0.58	-1.5
1,974,815	+		PFLU_RS08910	0.58	+1.1
1,974,815	+		PFLU_RS08910	0.58	-1.4
1,974,815	+		PFLU_RS08910	0.58	+2.1
1,974,815	+		PFLU_RS08910	0.58	-1.0
1,974,815	+		PFLU_RS08910	0.58	+0.8
1,974,815	+		PFLU_RS08910	0.58	-0.6
1,974,815	+		PFLU_RS08910	0.58	+0.1
1,974,816	-		PFLU_RS08910	0.58	-2.1
1,974,816	-		PFLU_RS08910	0.58	-0.8
1,974,816	-		PFLU_RS08910	0.58	-1.9
1,974,816	-		PFLU_RS08910	0.58	-1.8
1,974,816	-		PFLU_RS08910	0.58	-1.9
1,974,816	-		PFLU_RS08910	0.58	-0.8
1,974,816	-		PFLU_RS08910	0.58	+0.4
1,974,816	-		PFLU_RS08910	0.58	-0.3
1,974,816	-		PFLU_RS08910	0.58	+2.1
1,974,816	-		PFLU_RS08910	0.58	-1.2
1,974,816	-		PFLU_RS08910	0.58	-1.3
1,974,816	-		PFLU_RS08910	0.58	-2.1
1,974,816	-		PFLU_RS08910	0.58	+0.1
1,974,816	-		PFLU_RS08910	0.58	+0.1