Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS19165

Experiment: Trisodium citrate 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate 10 mM (C)
4,333,955	+		PFLU_RS19160	0.68	-0.8
4,333,956	-		PFLU_RS19160	0.68	-0.3
4,334,041	+		PFLU_RS19160	0.72	+0.3
4,334,041	+		PFLU_RS19160	0.72	-1.8
4,334,041	+		PFLU_RS19160	0.72	-1.8
4,334,041	+		PFLU_RS19160	0.72	+0.7
4,334,041	+		PFLU_RS19160	0.72	-0.3
4,334,042	-		PFLU_RS19160	0.72	-1.8
4,334,042	-		PFLU_RS19160	0.72	-0.5
4,334,042	-		PFLU_RS19160	0.72	-1.3
4,334,042	-		PFLU_RS19160	0.72	+0.7
4,334,044	+		PFLU_RS19160	0.72	-1.6
4,334,045	-		PFLU_RS19160	0.72	-1.3
4,334,045	-		PFLU_RS19160	0.72	-0.8
4,334,045	-		PFLU_RS19160	0.72	+0.3
4,334,045	-		PFLU_RS19160	0.72	-1.6
4,334,305	+		PFLU_RS19160	0.83	-0.3
4,334,305	+		PFLU_RS19160	0.83	+1.7
4,334,305	+		PFLU_RS19160	0.83	+0.7
4,334,305	+		PFLU_RS19160	0.83	+0.7
4,334,305	+		PFLU_RS19160	0.83	-0.3
4,334,305	+		PFLU_RS19160	0.83	-1.6
4,334,306	-		PFLU_RS19160	0.83	-1.1
4,334,306	-		PFLU_RS19160	0.83	-0.8
4,334,306	-		PFLU_RS19160	0.83	-1.4
4,334,306	-		PFLU_RS19160	0.83	-0.5
4,334,306	-		PFLU_RS19160	0.83	-1.3
4,334,306	-		PFLU_RS19160	0.83	+1.7
4,334,306	-		PFLU_RS19160	0.83	-0.3
4,334,306	-		PFLU_RS19160	0.83	+0.1
4,334,306	-		PFLU_RS19160	0.83	-1.8
4,334,306	-		PFLU_RS19160	0.83	+0.3
4,334,334	+		PFLU_RS19160	0.84	-0.3
4,334,334	+		PFLU_RS19160	0.84	+0.3
4,334,335	-		PFLU_RS19160	0.84	-0.4
4,334,335	-		PFLU_RS19160	0.84	+0.5
4,334,385	+		PFLU_RS19160	0.86	-1.3
4,334,386	-		PFLU_RS19160	0.86	-0.8
4,334,618	+				-0.3
4,334,727	-				-2.1
4,334,727	-				+0.6
4,334,742	+				-0.8
4,334,743	-				+0.4
4,334,787	+				-0.7
4,334,787	+				-0.7
4,334,788	-				+0.3
4,334,788	-				-1.3
4,334,788	-				-0.2
4,334,810	-				-0.8
4,334,868	+				-0.1
4,334,869	-				-0.4
4,334,869	-				-0.1
4,334,870	+				-1.1
4,334,870	+				+0.7
4,334,870	+				-0.1
4,334,890	+				+0.1
4,334,933	-				-0.8
4,334,933	-				-1.7
4,334,936	+				+0.2
4,334,936	+				-1.3
4,334,936	+				-1.3
4,334,936	+				-0.3
4,334,936	+				-0.8
4,334,936	+				+0.7
4,334,937	-				-0.8
4,334,937	-				+1.0
4,334,937	-				+1.3
4,334,937	-				+0.7
4,334,937	-				+0.1
4,334,937	-				-0.5
4,334,937	-				-2.5
4,334,937	-				-0.1
4,334,937	-				-0.2
4,334,937	-				-0.2
4,334,938	+				-1.3
4,334,938	+				+1.5
4,334,938	+				+0.7
4,334,938	+				-1.3
4,334,938	+				+0.4
4,334,938	+				+1.3
4,334,938	+				+0.7
4,334,938	+				-0.6
4,334,938	+				+2.3
4,334,938	+				+0.7
4,334,938	+				-0.8
4,334,938	+				+0.7
4,334,938	+				-2.1
4,334,938	+				-0.3
4,334,938	+				-1.6
4,334,938	+				+0.7
4,334,938	+				-1.6
4,334,938	+				+0.7
4,334,938	+				+0.0
4,334,938	+				-0.3
4,334,938	+				+0.2
4,334,938	+				-1.3
4,334,938	+				-0.3
4,334,938	+				-2.3
4,334,938	+				+1.7
4,334,938	+				-1.8
4,334,938	+				+1.3
4,334,938	+				-0.3
4,334,938	+				+0.7
4,334,938	+				-1.6
4,334,938	+				-0.8
4,334,938	+				+0.7
4,334,938	+				-2.1
4,334,938	+				-1.3
4,334,939	-				-1.8
4,334,939	-				-0.8
4,334,939	-				-0.1
4,334,939	-				-0.3
4,334,939	-				-1.1
4,334,939	-				+1.1
4,334,939	-				+0.7
4,334,939	-				+0.4
4,334,939	-				-0.3
4,334,939	-				+0.4
4,334,939	-				-0.1
4,334,939	-				-0.3
4,334,939	-				-1.0
4,334,939	-				+0.6
4,334,939	-				-0.3
4,334,939	-				+0.7
4,334,939	-				+0.9
4,334,939	-				-0.1
4,334,939	-				-0.7
4,334,939	-				+0.4
4,334,939	-				+0.1
4,334,939	-				-0.3
4,334,939	-				-0.4
4,334,939	-				-0.1
4,334,939	-				-1.8
4,334,939	-				-0.7
4,334,939	-				-0.9
4,334,939	-				+0.9
4,334,939	-				-0.8
4,334,939	-				+0.5
4,334,939	-				+1.7
4,334,954	+				+0.7
4,334,954	+				-1.6
4,334,955	-				-0.8
4,334,955	-				+1.2
4,334,955	-				-0.8
4,334,955	-				+1.3
4,334,955	-				-0.1
4,334,955	-				+1.3
4,334,955	-				+1.1
4,334,955	-				-1.1
4,334,962	-				-0.1
4,334,962	-				-0.0
4,334,962	-				+0.0
4,334,962	-				-1.1
4,334,962	-				+0.2
4,334,962	-				-0.3
4,334,962	-				+0.2
4,334,988	-				+1.5
4,335,016	+				+0.7
4,335,016	+				+0.2
4,335,017	-				-1.3
4,335,034	-		PFLU_RS19165	0.11	+0.7
4,335,034	-		PFLU_RS19165	0.11	-0.3
4,335,133	-		PFLU_RS19165	0.19	-0.3
4,335,133	-		PFLU_RS19165	0.19	+0.2
4,335,234	-		PFLU_RS19165	0.27	+1.7
4,335,234	-		PFLU_RS19165	0.27	+0.2
4,335,622	+		PFLU_RS19165	0.57	+0.7
4,335,623	-		PFLU_RS19165	0.57	-0.3
4,335,623	-		PFLU_RS19165	0.57	+0.7
4,335,623	-		PFLU_RS19165	0.57	-0.3
4,335,656	-		PFLU_RS19165	0.60	-1.6
4,335,709	+		PFLU_RS19165	0.64	-0.3
4,335,807	-		PFLU_RS19165	0.71	-1.3
4,335,884	-		PFLU_RS19165	0.77	-0.3
4,335,884	-		PFLU_RS19165	0.77	-2.3
4,335,892	+		PFLU_RS19165	0.78	+1.7
4,335,893	-		PFLU_RS19165	0.78	+2.3
4,335,893	-		PFLU_RS19165	0.78	-0.3
4,335,893	-		PFLU_RS19165	0.78	-0.3
4,335,893	-		PFLU_RS19165	0.78	+2.1
4,335,893	-		PFLU_RS19165	0.78	-0.3
4,335,940	+		PFLU_RS19165	0.82	-0.3
4,335,940	+		PFLU_RS19165	0.82	-0.8
4,335,940	+		PFLU_RS19165	0.82	-2.3
4,335,941	-		PFLU_RS19165	0.82	+0.2
4,335,941	-		PFLU_RS19165	0.82	+1.5
4,335,941	-		PFLU_RS19165	0.82	-2.1
4,335,941	-		PFLU_RS19165	0.82	-1.6
4,335,941	-		PFLU_RS19165	0.82	-0.3
4,335,941	-		PFLU_RS19165	0.82	+1.3
4,335,983	+		PFLU_RS19165	0.85	+0.2
4,335,984	-		PFLU_RS19165	0.85	+1.7
4,335,984	-		PFLU_RS19165	0.85	-0.3
4,336,065	-				-1.6
4,336,096	-				-0.3
4,336,096	-				+0.2
4,336,096	-				+2.3
4,336,129	+				+1.7
4,336,129	+				-0.3
4,336,129	+				-0.3
4,336,129	+				-0.3
4,336,130	-				+0.7
4,336,130	-				-2.3
4,336,130	-				+0.7
4,336,218	+				+0.7
4,336,219	-				-0.8
4,336,219	-				+0.9
4,336,219	-				-0.3
4,336,281	+				-0.8
4,336,281	+				+0.7
4,336,281	+				-1.8
4,336,281	+				+1.7
4,336,281	+				+0.3
4,336,281	+				-0.7
4,336,281	+				+2.3
4,336,281	+				+1.7
4,336,282	-				+0.7
4,336,282	-				-0.6
4,336,282	-				+0.7
4,336,282	-				-0.8
4,336,282	-				+1.2
4,336,282	-				-0.3
4,336,282	-				-0.4
4,336,282	-				+0.4
4,336,283	+				-1.3
4,336,283	+				-1.3
4,336,283	+				-0.3
4,336,283	+				-0.3
4,336,283	+				+1.2
4,336,284	-				-0.6
4,336,284	-				-1.6
4,336,284	-				-2.6
4,336,284	-				-0.6
4,336,284	-				-0.3
4,336,284	-				-1.4
4,336,284	-				-0.7
4,336,284	-				-0.3
4,336,287	-				+1.7
4,336,287	-				+0.2
4,336,287	-				-0.3
4,336,524	+		PFLU_RS19170	0.38	+0.7
4,336,525	-		PFLU_RS19170	0.38	-0.3
4,336,525	-		PFLU_RS19170	0.38	-0.3
4,336,609	+		PFLU_RS19170	0.51	-0.8
4,336,609	+		PFLU_RS19170	0.51	-1.6
4,336,609	+		PFLU_RS19170	0.51	+1.2
4,336,640	+		PFLU_RS19170	0.56	+1.7
4,336,641	-		PFLU_RS19170	0.56	+0.7
4,336,685	+		PFLU_RS19170	0.63	+0.7
4,336,685	+		PFLU_RS19170	0.63	-1.6
4,336,685	+		PFLU_RS19170	0.63	+0.7
4,336,686	-		PFLU_RS19170	0.63	-1.3
4,336,686	-		PFLU_RS19170	0.63	-2.1
4,336,686	-		PFLU_RS19170	0.63	+0.0
4,336,757	+		PFLU_RS19170	0.74	-0.3
4,336,757	+		PFLU_RS19170	0.74	-0.8
4,336,757	+		PFLU_RS19170	0.74	-0.8
4,336,757	+		PFLU_RS19170	0.74	-0.3
4,336,757	+		PFLU_RS19170	0.74	+0.7
4,336,757	+		PFLU_RS19170	0.74	-0.3
4,336,758	-		PFLU_RS19170	0.74	+2.3
4,336,758	-		PFLU_RS19170	0.74	-0.3
4,336,812	-		PFLU_RS19170	0.83	-0.8
4,336,812	-		PFLU_RS19170	0.83	+1.7
4,336,821	-		PFLU_RS19170	0.84	+2.3
4,336,904	+				+1.3
4,336,904	+				+0.0
4,336,904	+				+0.7
4,336,904	+				+0.7
4,336,931	+				+0.7
4,336,932	-				-0.8
4,336,941	+				+1.7
4,336,941	+				-1.8
4,336,941	+				+1.7
4,336,941	+				+0.2
4,336,941	+				+2.3
4,336,942	-				+1.7
4,336,942	-				+0.7
4,336,942	-				-2.3
4,336,942	-				-1.3
4,336,942	-				-0.8
4,336,942	-				-0.3
4,336,963	-				-0.1
4,336,963	-				-0.1
4,336,984	-				+0.2
4,336,984	-				-0.3
4,336,984	-				+0.0
4,337,099	-				+0.7
4,337,099	-				+0.7
4,337,161	-		PFLU_RS19175	0.11	-1.1
4,337,161	-		PFLU_RS19175	0.11	-1.6
4,337,161	-		PFLU_RS19175	0.11	+0.7
4,337,161	-		PFLU_RS19175	0.11	-0.3
4,337,161	-		PFLU_RS19175	0.11	+0.7
4,337,161	-		PFLU_RS19175	0.11	+1.3
4,337,161	-		PFLU_RS19175	0.11	-0.1
4,337,163	+		PFLU_RS19175	0.12	+0.7
4,337,164	-		PFLU_RS19175	0.12	+0.7
4,337,164	-		PFLU_RS19175	0.12	+1.7
4,337,164	-		PFLU_RS19175	0.12	-0.3
4,337,164	-		PFLU_RS19175	0.12	+0.7