Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08650

Experiment: Trisodium citrate 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate 10 mM (C)
1,924,175	-				+0.3
1,924,175	-				-0.0
1,924,303	+				-0.4
1,924,303	+				+0.5
1,924,304	-				-0.3
1,924,304	-				-0.6
1,924,304	-				-1.4
1,924,361	+				-2.4
1,924,361	+				-0.8
1,924,361	+				+1.0
1,924,361	+				+0.3
1,924,362	-				+0.0
1,924,362	-				+0.9
1,924,362	-				+1.0
1,924,366	+				-1.4
1,924,366	+				-0.4
1,924,367	-				-2.4
1,924,367	-				+0.5
1,924,380	+				+0.6
1,924,380	+				+1.2
1,924,380	+				-0.0
1,924,380	+				+1.0
1,924,380	+				+0.6
1,924,380	+				+0.1
1,924,380	+				-0.1
1,924,380	+				+1.5
1,924,380	+				+0.4
1,924,380	+				-1.4
1,924,380	+				+0.9
1,924,380	+				-0.2
1,924,380	+				-1.0
1,924,380	+				+2.3
1,924,380	+				-1.2
1,924,380	+				+1.0
1,924,380	+				+1.5
1,924,380	+				-0.5
1,924,380	+				+1.8
1,924,380	+				-0.7
1,924,380	+				+0.8
1,924,380	+				+1.0
1,924,380	+				-1.4
1,924,380	+				-1.0
1,924,380	+				-1.9
1,924,380	+				-0.2
1,924,380	+				+0.8
1,924,380	+				-2.2
1,924,380	+				+0.6
1,924,380	+				-1.5
1,924,380	+				+1.0
1,924,380	+				-0.3
1,924,380	+				+1.4
1,924,380	+				+0.3
1,924,380	+				+1.6
1,924,380	+				+0.7
1,924,380	+				-1.8
1,924,380	+				-1.8
1,924,380	+				+0.4
1,924,380	+				+1.0
1,924,380	+				+0.2
1,924,380	+				-0.0
1,924,380	+				-1.7
1,924,380	+				+0.2
1,924,380	+				-2.4
1,924,380	+				-0.5
1,924,380	+				-0.6
1,924,380	+				+0.5
1,924,380	+				-0.8
1,924,380	+				-1.8
1,924,380	+				+0.5
1,924,380	+				+0.3
1,924,380	+				-0.6
1,924,380	+				+0.5
1,924,380	+				+0.4
1,924,380	+				+1.0
1,924,380	+				-0.4
1,924,380	+				-0.1
1,924,380	+				+0.8
1,924,380	+				-0.4
1,924,380	+				-0.4
1,924,380	+				+0.4
1,924,381	-				-0.2
1,924,381	-				+0.8
1,924,381	-				-1.6
1,924,381	-				+1.1
1,924,381	-				+0.0
1,924,381	-				+2.3
1,924,381	-				-1.0
1,924,381	-				+0.7
1,924,381	-				-0.1
1,924,381	-				+0.6
1,924,381	-				+0.4
1,924,381	-				-0.6
1,924,381	-				+0.2
1,924,381	-				+1.0
1,924,381	-				+1.6
1,924,381	-				+0.1
1,924,381	-				-1.5
1,924,381	-				+0.5
1,924,381	-				+3.3
1,924,381	-				+0.0
1,924,381	-				-0.2
1,924,381	-				+0.8
1,924,381	-				+0.6
1,924,381	-				-0.5
1,924,381	-				+1.0
1,924,381	-				-0.4
1,924,381	-				-0.6
1,924,381	-				+0.9
1,924,381	-				+1.0
1,924,381	-				+0.8
1,924,381	-				-0.2
1,924,381	-				+1.0
1,924,381	-				-0.8
1,924,381	-				+0.6
1,924,381	-				+1.7
1,924,381	-				+1.0
1,924,381	-				+0.4
1,924,381	-				+0.4
1,924,381	-				+0.6
1,924,381	-				+1.6
1,924,381	-				+1.6
1,924,381	-				-0.3
1,924,381	-				+1.6
1,924,381	-				-2.0
1,924,381	-				+0.3
1,924,381	-				+0.4
1,924,381	-				+0.7
1,924,381	-				+1.1
1,924,381	-				+0.1
1,924,381	-				-0.6
1,924,381	-				+0.6
1,924,381	-				+1.7
1,924,381	-				-0.7
1,924,381	-				-0.2
1,924,381	-				-0.9
1,924,381	-				+0.1
1,924,381	-				-0.2
1,924,381	-				+0.2
1,924,381	-				-1.4
1,924,381	-				-1.0
1,924,381	-				-0.6
1,924,381	-				-1.2
1,924,382	+				-0.9
1,924,382	+				+1.7
1,924,382	+				+1.2
1,924,382	+				+0.2
1,924,382	+				-0.6
1,924,382	+				-0.8
1,924,382	+				+1.0
1,924,382	+				-0.3
1,924,382	+				-1.0
1,924,382	+				-2.7
1,924,382	+				-1.7
1,924,383	-				-0.0
1,924,383	-				-0.2
1,924,383	-				-0.3
1,924,383	-				-1.6
1,924,383	-				+1.0
1,924,383	-				-0.4
1,924,383	-				+0.3
1,924,425	+				-0.4
1,924,425	+				-1.0
1,924,425	+				-0.7
1,924,425	+				-0.4
1,924,425	+				-1.4
1,924,425	+				-2.2
1,924,425	+				-0.3
1,924,425	+				-0.6
1,924,426	-				+1.0
1,924,426	-				-0.0
1,924,426	-				+0.4
1,924,426	-				+0.2
1,924,426	-				+1.0
1,924,426	-				+1.2
1,924,426	-				+2.0
1,924,426	-				+1.2
1,924,442	+				+0.3
1,924,511	+				+0.6
1,924,512	-				+0.0
1,924,553	+				-1.4
1,924,867	-		PFLU_RS08645	0.53	+0.2
1,924,969	+		PFLU_RS08645	0.69	-0.6
1,924,969	+		PFLU_RS08645	0.69	-2.7
1,924,970	-		PFLU_RS08645	0.69	-0.0
1,925,291	+		PFLU_RS08650	0.20	-1.3
1,925,292	-		PFLU_RS08650	0.20	-0.3
1,925,519	-		PFLU_RS08650	0.54	-2.4
1,925,519	-		PFLU_RS08650	0.54	-0.6
1,925,519	-		PFLU_RS08650	0.54	-1.1
1,925,667	+		PFLU_RS08650	0.76	-2.7
1,925,667	+		PFLU_RS08650	0.76	-0.4
1,925,792	+				-2.4
1,925,792	+				-1.6
1,925,792	+				-0.6
1,925,792	+				-1.4
1,925,793	-				-0.9
1,925,793	-				-2.2
1,925,794	+				+0.6
1,925,826	+				-0.6
1,925,826	+				-0.2
1,925,848	+				-0.9
1,925,848	+				+0.1
1,925,848	+				-0.6
1,925,848	+				-2.2
1,925,848	+				-1.0
1,925,848	+				-0.1
1,925,848	+				-0.4
1,925,848	+				-1.6
1,925,848	+				-1.0
1,925,849	-				-1.8
1,925,855	+				-1.0
1,925,855	+				-0.9
1,925,856	-				+0.2
1,925,856	-				+0.5
1,925,856	-				-1.4
1,925,862	+				-0.5
1,925,871	+				-0.2
1,925,871	+				-0.3
1,925,871	+				+0.6
1,925,872	-				-1.5
1,925,872	-				+1.6
1,925,960	+				-2.2
1,925,960	+				-0.6
1,925,961	-				-0.8
1,925,961	-				-1.0
1,925,961	-				+0.2
1,926,089	+		PFLU_RS08655	0.23	-3.3
1,926,089	+		PFLU_RS08655	0.23	-1.8
1,926,089	+		PFLU_RS08655	0.23	-1.6
1,926,089	+		PFLU_RS08655	0.23	-1.4
1,926,089	+		PFLU_RS08655	0.23	-1.4
1,926,089	+		PFLU_RS08655	0.23	-2.4
1,926,089	+		PFLU_RS08655	0.23	-0.0
1,926,089	+		PFLU_RS08655	0.23	-1.2
1,926,090	-		PFLU_RS08655	0.23	-1.6
1,926,090	-		PFLU_RS08655	0.23	-3.1
1,926,090	-		PFLU_RS08655	0.23	-1.4
1,926,090	-		PFLU_RS08655	0.23	-0.0
1,926,090	-		PFLU_RS08655	0.23	-3.3
1,926,092	-		PFLU_RS08655	0.23	-2.5
1,926,128	+		PFLU_RS08655	0.28	+0.1
1,926,128	+		PFLU_RS08655	0.28	-2.7
1,926,129	-		PFLU_RS08655	0.28	-2.5
1,926,129	-		PFLU_RS08655	0.28	-3.2
1,926,332	+		PFLU_RS08655	0.55	-2.7
1,926,718	+		PFLU_RS08660	0.29	-1.7
1,926,718	+		PFLU_RS08660	0.29	-2.5
1,926,718	+		PFLU_RS08660	0.29	-2.7
1,926,718	+		PFLU_RS08660	0.29	-1.7
1,926,718	+		PFLU_RS08660	0.29	-1.0
1,926,719	-		PFLU_RS08660	0.29	-2.4
1,926,719	-		PFLU_RS08660	0.29	-1.8
1,926,719	-		PFLU_RS08660	0.29	-1.4
1,926,719	-		PFLU_RS08660	0.29	-0.0
1,926,719	-		PFLU_RS08660	0.29	-2.9
1,926,734	-		PFLU_RS08660	0.38	-0.9