Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13085

Experiment: 4-Hydroxybenzoic Acid 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid 2 mM (C)
2,956,092	-				-0.7
2,956,092	-				+3.2
2,956,113	+				-0.7
2,956,120	+				-2.0
2,956,120	+				+1.0
2,956,120	+				+1.3
2,956,121	-				+0.6
2,956,121	-				-0.2
2,956,121	-				-0.2
2,956,121	-				+0.6
2,956,138	+				-0.2
2,956,330	+		PFLU_RS13080	0.24	-1.7
2,956,330	+		PFLU_RS13080	0.24	+0.9
2,956,330	+		PFLU_RS13080	0.24	-2.2
2,956,346	+		PFLU_RS13080	0.26	+2.3
2,956,347	-		PFLU_RS13080	0.26	-0.7
2,956,426	+		PFLU_RS13080	0.34	-1.5
2,956,426	+		PFLU_RS13080	0.34	-2.5
2,956,426	+		PFLU_RS13080	0.34	-1.2
2,956,427	-		PFLU_RS13080	0.35	+2.6
2,956,427	-		PFLU_RS13080	0.35	-1.7
2,956,429	+		PFLU_RS13080	0.35	+0.6
2,956,429	+		PFLU_RS13080	0.35	+2.5
2,956,429	+		PFLU_RS13080	0.35	+0.9
2,956,430	-		PFLU_RS13080	0.35	-1.0
2,956,450	+		PFLU_RS13080	0.37	+0.9
2,956,451	-		PFLU_RS13080	0.37	+0.5
2,956,451	-		PFLU_RS13080	0.37	-1.5
2,956,451	-		PFLU_RS13080	0.37	-2.9
2,956,583	-		PFLU_RS13080	0.51	+2.0
2,956,583	-		PFLU_RS13080	0.51	+1.0
2,956,720	-		PFLU_RS13080	0.66	-2.5
2,956,800	+		PFLU_RS13080	0.75	-0.2
2,956,801	-		PFLU_RS13080	0.75	-0.2
2,956,801	-		PFLU_RS13080	0.75	-1.0
2,956,864	+		PFLU_RS13080	0.82	+1.3
2,956,865	-		PFLU_RS13080	0.82	+2.0
2,956,874	+		PFLU_RS13080	0.83	-1.2
2,956,874	+		PFLU_RS13080	0.83	-0.1
2,956,875	-		PFLU_RS13080	0.83	+0.6
2,956,875	-		PFLU_RS13080	0.83	-2.7
2,956,881	+		PFLU_RS13080	0.84	+1.8
2,956,881	+		PFLU_RS13080	0.84	+2.0
2,956,882	-		PFLU_RS13080	0.84	+2.3
2,956,882	-		PFLU_RS13080	0.84	+0.6
2,956,951	+				+1.2
2,956,951	+				-2.1
2,956,952	-				+2.1
2,956,952	-				+1.1
2,957,003	+				-1.2
2,957,003	+				-0.7
2,957,003	+				-2.5
2,957,003	+				+1.1
2,957,004	-				-1.5
2,957,004	-				-0.4
2,957,004	-				-1.7
2,957,055	-				+0.1
2,957,127	+		PFLU_RS13085	0.17	-0.7
2,957,127	+		PFLU_RS13085	0.17	-0.8
2,957,127	+		PFLU_RS13085	0.17	+0.0
2,957,127	+		PFLU_RS13085	0.17	-2.6
2,957,127	+		PFLU_RS13085	0.17	+0.3
2,957,127	+		PFLU_RS13085	0.17	+1.3
2,957,128	-		PFLU_RS13085	0.18	+0.3
2,957,128	-		PFLU_RS13085	0.18	-0.7
2,957,128	-		PFLU_RS13085	0.18	-2.8
2,957,266	-		PFLU_RS13085	0.70	-2.1
2,957,266	-		PFLU_RS13085	0.70	-1.2
2,957,405	+				+1.1
2,957,474	+		PFLU_RS13090	0.16	+1.7
2,957,474	+		PFLU_RS13090	0.16	-1.0
2,957,537	+		PFLU_RS13090	0.24	+0.3
2,957,537	+		PFLU_RS13090	0.24	-2.1
2,957,537	+		PFLU_RS13090	0.24	-1.1
2,957,537	+		PFLU_RS13090	0.24	+0.6
2,957,537	+		PFLU_RS13090	0.24	+0.6
2,957,607	-		PFLU_RS13090	0.32	-1.7
2,957,672	+		PFLU_RS13090	0.40	-0.3
2,957,672	+		PFLU_RS13090	0.40	+1.4
2,957,672	+		PFLU_RS13090	0.40	+1.0
2,957,672	+		PFLU_RS13090	0.40	-1.6
2,957,672	+		PFLU_RS13090	0.40	+1.8
2,957,672	+		PFLU_RS13090	0.40	-0.7
2,957,673	-		PFLU_RS13090	0.40	+2.2
2,957,673	-		PFLU_RS13090	0.40	-0.7
2,957,673	-		PFLU_RS13090	0.40	+1.9
2,957,673	-		PFLU_RS13090	0.40	-2.1
2,957,673	-		PFLU_RS13090	0.40	-0.1
2,958,099	-				-1.5
2,958,099	-				+0.7
2,958,099	-				-0.5
2,958,128	-				+1.2
2,958,128	-				+2.3
2,958,128	-				-0.2
2,958,133	+				-0.7
2,958,133	+				-2.6
2,958,133	+				+0.0
2,958,133	+				+0.2
2,958,133	+				-1.4
2,958,134	-				+3.7
2,958,134	-				+2.0
2,958,134	-				-2.1
2,958,137	+				+0.4
2,958,137	+				+0.9
2,958,138	-				-1.0
2,958,138	-				-0.2
2,958,138	-				+1.1
2,958,138	-				+1.6
2,958,146	+				+0.5
2,958,146	+				-1.0
2,958,146	+				+0.6
2,958,167	+				-1.7
2,958,167	+				+0.3
2,958,167	+				-2.6
2,958,167	+				-0.8
2,958,167	+				-1.5
2,958,168	-				+0.1
2,958,168	-				-2.0
2,958,168	-				-1.5
2,958,168	-				-0.5
2,958,168	-				+1.1
2,958,168	-				-0.5
2,958,168	-				+0.5
2,958,210	+				+1.5
2,958,211	-				-1.0
2,958,211	-				-0.7
2,958,211	-				+0.0
2,958,211	-				-0.3
2,958,211	-				+0.9
2,958,222	+				+1.6
2,958,222	+				+0.8
2,958,223	-				+0.9
2,958,223	-				+1.3
2,958,237	+				-1.0
2,958,238	-				-0.2