Experiment: 4-Hydroxybenzoic Acid 2 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS03240 and PFLU_RS03245 are separated by 66 nucleotides PFLU_RS03245 and PFLU_RS03250 are separated by 147 nucleotides PFLU_RS03250 and PFLU_RS03255 are separated by 85 nucleotides
PFLU_RS03240: PFLU_RS03240 - copper-translocating P-type ATPase, at 748,572 to 750,773
_RS03240
PFLU_RS03245: PFLU_RS03245 - hypothetical protein, at 750,840 to 751,220
_RS03245
PFLU_RS03250: PFLU_RS03250 - heavy-metal-associated domain-containing protein, at 751,368 to 751,565
_RS03250
PFLU_RS03255: PFLU_RS03255 - multidrug effflux MFS transporter, at 751,651 to 752,844
_RS03255
Position (kb) 751
752 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 750.575 kb on - strand at 750.575 kb on - strand at 750.575 kb on - strand at 750.802 kb on + strand at 750.841 kb on + strand at 750.841 kb on + strand at 750.841 kb on + strand at 750.841 kb on + strand at 750.842 kb on - strand at 750.842 kb on - strand at 750.842 kb on - strand at 750.842 kb on - strand at 750.842 kb on - strand at 750.842 kb on - strand at 750.842 kb on - strand at 750.842 kb on - strand at 750.844 kb on + strand at 750.844 kb on + strand at 750.844 kb on + strand at 750.844 kb on + strand at 750.845 kb on - strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.868 kb on + strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 750.869 kb on - strand at 751.005 kb on + strand, within PFLU_RS03245 at 751.005 kb on + strand, within PFLU_RS03245 at 751.005 kb on + strand, within PFLU_RS03245 at 751.005 kb on + strand, within PFLU_RS03245 at 751.005 kb on + strand, within PFLU_RS03245 at 751.005 kb on + strand, within PFLU_RS03245 at 751.005 kb on + strand, within PFLU_RS03245 at 751.005 kb on + strand, within PFLU_RS03245 at 751.005 kb on + strand, within PFLU_RS03245 at 751.005 kb on + strand, within PFLU_RS03245 at 751.005 kb on + strand, within PFLU_RS03245 at 751.005 kb on + strand, within PFLU_RS03245 at 751.005 kb on + strand, within PFLU_RS03245 at 751.005 kb on + strand, within PFLU_RS03245 at 751.006 kb on - strand, within PFLU_RS03245 at 751.006 kb on - strand, within PFLU_RS03245 at 751.006 kb on - strand, within PFLU_RS03245 at 751.006 kb on - strand, within PFLU_RS03245 at 751.006 kb on - strand, within PFLU_RS03245 at 751.006 kb on - strand, within PFLU_RS03245 at 751.006 kb on - strand, within PFLU_RS03245 at 751.006 kb on - strand, within PFLU_RS03245 at 751.006 kb on - strand, within PFLU_RS03245 at 751.006 kb on - strand, within PFLU_RS03245 at 751.062 kb on + strand, within PFLU_RS03245 at 751.063 kb on - strand, within PFLU_RS03245 at 751.078 kb on + strand, within PFLU_RS03245 at 751.078 kb on + strand, within PFLU_RS03245 at 751.078 kb on + strand, within PFLU_RS03245 at 751.078 kb on + strand, within PFLU_RS03245 at 751.078 kb on + strand, within PFLU_RS03245 at 751.078 kb on + strand, within PFLU_RS03245 at 751.078 kb on + strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.079 kb on - strand, within PFLU_RS03245 at 751.141 kb on + strand, within PFLU_RS03245 at 751.141 kb on + strand, within PFLU_RS03245 at 751.141 kb on + strand, within PFLU_RS03245 at 751.141 kb on + strand, within PFLU_RS03245 at 751.142 kb on - strand, within PFLU_RS03245 at 751.142 kb on - strand, within PFLU_RS03245 at 751.142 kb on - strand, within PFLU_RS03245 at 751.142 kb on - strand, within PFLU_RS03245 at 751.142 kb on - strand, within PFLU_RS03245 at 751.142 kb on - strand, within PFLU_RS03245 at 751.142 kb on - strand, within PFLU_RS03245 at 751.281 kb on + strand at 751.282 kb on - strand at 751.296 kb on + strand at 751.296 kb on + strand at 751.296 kb on + strand at 751.296 kb on + strand at 751.296 kb on + strand at 751.296 kb on + strand at 751.297 kb on - strand at 751.297 kb on - strand at 751.297 kb on - strand at 751.297 kb on - strand at 751.297 kb on - strand at 751.297 kb on - strand at 751.315 kb on + strand at 751.315 kb on + strand at 751.316 kb on - strand at 751.316 kb on - strand at 751.316 kb on - strand at 751.375 kb on + strand at 751.375 kb on + strand at 751.376 kb on - strand at 751.376 kb on - strand at 751.376 kb on - strand at 751.376 kb on - strand at 751.376 kb on - strand at 751.545 kb on + strand, within PFLU_RS03250 at 751.545 kb on + strand, within PFLU_RS03250 at 751.545 kb on + strand, within PFLU_RS03250 at 751.546 kb on - strand at 751.546 kb on - strand at 751.546 kb on - strand at 751.546 kb on - strand at 751.558 kb on + strand at 751.558 kb on + strand at 751.558 kb on + strand at 751.558 kb on + strand at 751.559 kb on - strand at 751.576 kb on + strand at 751.581 kb on - strand at 751.588 kb on + strand at 751.588 kb on + strand at 751.589 kb on - strand at 751.616 kb on + strand at 751.617 kb on - strand at 751.621 kb on + strand at 751.664 kb on + strand at 751.717 kb on + strand at 751.718 kb on - strand at 751.718 kb on - strand at 751.792 kb on + strand, within PFLU_RS03255 at 751.792 kb on + strand, within PFLU_RS03255 at 751.792 kb on + strand, within PFLU_RS03255 at 751.792 kb on + strand, within PFLU_RS03255 at 751.792 kb on + strand, within PFLU_RS03255 at 751.792 kb on + strand, within PFLU_RS03255 at 751.792 kb on + strand, within PFLU_RS03255 at 751.793 kb on - strand, within PFLU_RS03255 at 751.793 kb on - strand, within PFLU_RS03255 at 751.793 kb on - strand, within PFLU_RS03255 at 751.793 kb on - strand, within PFLU_RS03255 at 751.793 kb on - strand, within PFLU_RS03255 at 751.825 kb on + strand, within PFLU_RS03255 at 751.825 kb on + strand, within PFLU_RS03255 at 751.825 kb on + strand, within PFLU_RS03255 at 751.825 kb on + strand, within PFLU_RS03255 at 751.825 kb on + strand, within PFLU_RS03255 at 751.825 kb on + strand, within PFLU_RS03255 at 751.825 kb on + strand, within PFLU_RS03255 at 751.825 kb on + strand, within PFLU_RS03255 at 751.825 kb on + strand, within PFLU_RS03255 at 751.825 kb on + strand, within PFLU_RS03255 at 751.825 kb on + strand, within PFLU_RS03255 at 751.825 kb on + strand, within PFLU_RS03255 at 751.825 kb on + strand, within PFLU_RS03255 at 751.825 kb on + strand, within PFLU_RS03255 at 751.825 kb on + strand, within PFLU_RS03255 at 751.825 kb on + strand, within PFLU_RS03255 at 751.826 kb on - strand, within PFLU_RS03255 at 751.826 kb on - strand, within PFLU_RS03255 at 751.826 kb on - strand, within PFLU_RS03255 at 751.826 kb on - strand, within PFLU_RS03255 at 751.826 kb on - strand, within PFLU_RS03255 at 751.826 kb on - strand, within PFLU_RS03255 at 751.826 kb on - strand, within PFLU_RS03255 at 751.826 kb on - strand, within PFLU_RS03255 at 751.826 kb on - strand, within PFLU_RS03255 at 751.826 kb on - strand, within PFLU_RS03255 at 751.887 kb on + strand, within PFLU_RS03255 at 751.887 kb on + strand, within PFLU_RS03255 at 751.887 kb on + strand, within PFLU_RS03255 at 751.887 kb on + strand, within PFLU_RS03255 at 751.888 kb on - strand, within PFLU_RS03255 at 751.888 kb on - strand, within PFLU_RS03255 at 751.888 kb on - strand, within PFLU_RS03255 at 752.038 kb on + strand, within PFLU_RS03255 at 752.038 kb on + strand, within PFLU_RS03255 at 752.039 kb on - strand, within PFLU_RS03255 at 752.039 kb on - strand, within PFLU_RS03255 at 752.039 kb on - strand, within PFLU_RS03255 at 752.148 kb on - strand, within PFLU_RS03255 at 752.246 kb on - strand, within PFLU_RS03255 at 752.281 kb on + strand, within PFLU_RS03255 at 752.281 kb on + strand, within PFLU_RS03255 at 752.282 kb on - strand, within PFLU_RS03255 at 752.298 kb on + strand, within PFLU_RS03255 at 752.299 kb on - strand, within PFLU_RS03255 at 752.299 kb on - strand, within PFLU_RS03255 at 752.299 kb on - strand, within PFLU_RS03255 at 752.299 kb on - strand, within PFLU_RS03255 at 752.299 kb on - strand, within PFLU_RS03255 at 752.299 kb on - strand, within PFLU_RS03255 at 752.323 kb on + strand, within PFLU_RS03255 at 752.323 kb on + strand, within PFLU_RS03255 at 752.323 kb on + strand, within PFLU_RS03255 at 752.323 kb on + strand, within PFLU_RS03255 at 752.323 kb on + strand, within PFLU_RS03255 at 752.323 kb on + strand, within PFLU_RS03255 at 752.324 kb on - strand, within PFLU_RS03255 at 752.324 kb on - strand, within PFLU_RS03255 at 752.324 kb on - strand, within PFLU_RS03255 at 752.324 kb on - strand, within PFLU_RS03255 at 752.349 kb on + strand, within PFLU_RS03255 at 752.359 kb on + strand, within PFLU_RS03255 at 752.359 kb on + strand, within PFLU_RS03255 at 752.360 kb on - strand, within PFLU_RS03255 at 752.360 kb on - strand, within PFLU_RS03255 at 752.380 kb on + strand, within PFLU_RS03255 at 752.380 kb on + strand, within PFLU_RS03255 at 752.381 kb on - strand, within PFLU_RS03255 at 752.417 kb on + strand, within PFLU_RS03255 at 752.417 kb on + strand, within PFLU_RS03255 at 752.418 kb on - strand, within PFLU_RS03255 at 752.418 kb on - strand, within PFLU_RS03255 at 752.418 kb on - strand, within PFLU_RS03255 at 752.418 kb on - strand, within PFLU_RS03255 at 752.494 kb on + strand, within PFLU_RS03255 at 752.495 kb on - strand, within PFLU_RS03255 at 752.495 kb on - strand, within PFLU_RS03255 at 752.495 kb on - strand, within PFLU_RS03255 at 752.495 kb on - strand, within PFLU_RS03255
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid 2 mM (C) remove 750,575 - -1.0 750,575 - -3.5 750,575 - -2.0 750,802 + +0.6 750,841 + +0.6 750,841 + +0.4 750,841 + -1.2 750,841 + -1.0 750,842 - -2.8 750,842 - +3.5 750,842 - +1.0 750,842 - +0.3 750,842 - -0.0 750,842 - -1.3 750,842 - +0.8 750,842 - +1.3 750,844 + +2.3 750,844 + +0.5 750,844 + -0.3 750,844 + -1.6 750,845 - +0.3 750,868 + -0.3 750,868 + -0.1 750,868 + -1.6 750,868 + -0.7 750,868 + -0.4 750,868 + +1.5 750,868 + -0.2 750,868 + +1.1 750,868 + +0.7 750,868 + +1.4 750,868 + -1.2 750,868 + +1.5 750,868 + -1.0 750,868 + +2.3 750,868 + -0.5 750,868 + -3.0 750,868 + -0.8 750,868 + -1.0 750,868 + +0.4 750,869 - -1.8 750,869 - -0.2 750,869 - +0.4 750,869 - +0.1 750,869 - -0.1 750,869 - +0.0 750,869 - -2.5 750,869 - +0.0 750,869 - +1.6 750,869 - -1.2 750,869 - -0.4 750,869 - +0.6 750,869 - -1.5 750,869 - -0.1 750,869 - -0.4 750,869 - -0.6 750,869 - -1.5 750,869 - +1.0 750,869 - -0.3 750,869 - -1.6 750,869 - -2.6 750,869 - -1.5 750,869 - +1.0 750,869 - +3.0 751,005 + PFLU_RS03245 0.43 -0.1 751,005 + PFLU_RS03245 0.43 -2.5 751,005 + PFLU_RS03245 0.43 -1.9 751,005 + PFLU_RS03245 0.43 -0.8 751,005 + PFLU_RS03245 0.43 -0.9 751,005 + PFLU_RS03245 0.43 -2.5 751,005 + PFLU_RS03245 0.43 -1.5 751,005 + PFLU_RS03245 0.43 +0.0 751,005 + PFLU_RS03245 0.43 -1.4 751,005 + PFLU_RS03245 0.43 -0.3 751,005 + PFLU_RS03245 0.43 -1.3 751,005 + PFLU_RS03245 0.43 -1.4 751,005 + PFLU_RS03245 0.43 -1.1 751,005 + PFLU_RS03245 0.43 -1.7 751,006 - PFLU_RS03245 0.44 +1.0 751,006 - PFLU_RS03245 0.44 +0.0 751,006 - PFLU_RS03245 0.44 +1.1 751,006 - PFLU_RS03245 0.44 -1.7 751,006 - PFLU_RS03245 0.44 -0.1 751,006 - PFLU_RS03245 0.44 +1.0 751,006 - PFLU_RS03245 0.44 -0.2 751,006 - PFLU_RS03245 0.44 +0.1 751,006 - PFLU_RS03245 0.44 -0.7 751,006 - PFLU_RS03245 0.44 -2.2 751,062 + PFLU_RS03245 0.58 -2.8 751,063 - PFLU_RS03245 0.59 +0.3 751,078 + PFLU_RS03245 0.62 +1.0 751,078 + PFLU_RS03245 0.62 -0.9 751,078 + PFLU_RS03245 0.62 +0.4 751,078 + PFLU_RS03245 0.62 -2.7 751,078 + PFLU_RS03245 0.62 -1.2 751,078 + PFLU_RS03245 0.62 -1.0 751,078 + PFLU_RS03245 0.62 -1.2 751,079 - PFLU_RS03245 0.63 -0.1 751,079 - PFLU_RS03245 0.63 +0.2 751,079 - PFLU_RS03245 0.63 -0.4 751,079 - PFLU_RS03245 0.63 +2.3 751,079 - PFLU_RS03245 0.63 +0.0 751,079 - PFLU_RS03245 0.63 -2.8 751,079 - PFLU_RS03245 0.63 -0.6 751,079 - PFLU_RS03245 0.63 +2.4 751,079 - PFLU_RS03245 0.63 -0.3 751,079 - PFLU_RS03245 0.63 -2.4 751,141 + PFLU_RS03245 0.79 -3.6 751,141 + PFLU_RS03245 0.79 +1.4 751,141 + PFLU_RS03245 0.79 -2.2 751,141 + PFLU_RS03245 0.79 +1.4 751,142 - PFLU_RS03245 0.79 -0.6 751,142 - PFLU_RS03245 0.79 +1.0 751,142 - PFLU_RS03245 0.79 -1.2 751,142 - PFLU_RS03245 0.79 -1.3 751,142 - PFLU_RS03245 0.79 -1.0 751,142 - PFLU_RS03245 0.79 -0.8 751,142 - PFLU_RS03245 0.79 -1.7 751,281 + -0.6 751,282 - +1.2 751,296 + +0.6 751,296 + +0.9 751,296 + -1.0 751,296 + +1.0 751,296 + -1.0 751,296 + +1.3 751,297 - -0.0 751,297 - +0.9 751,297 - +0.2 751,297 - -2.3 751,297 - -1.7 751,297 - +0.8 751,315 + -1.2 751,315 + +1.2 751,316 - +2.7 751,316 - +0.1 751,316 - -0.4 751,375 + -1.0 751,375 + -2.7 751,376 - +1.4 751,376 - -1.6 751,376 - -1.4 751,376 - +1.6 751,376 - -0.6 751,545 + PFLU_RS03250 0.89 -1.2 751,545 + PFLU_RS03250 0.89 -1.4 751,545 + PFLU_RS03250 0.89 -2.2 751,546 - +1.0 751,546 - -1.2 751,546 - -2.1 751,546 - +0.7 751,558 + +1.4 751,558 + +0.5 751,558 + -1.4 751,558 + -0.7 751,559 - -0.6 751,576 + +1.9 751,581 - +0.9 751,588 + +2.0 751,588 + +0.4 751,589 - -2.2 751,616 + -0.6 751,617 - -1.8 751,621 + -2.2 751,664 + +0.2 751,717 + +0.5 751,718 - -1.6 751,718 - +2.4 751,792 + PFLU_RS03255 0.12 -2.3 751,792 + PFLU_RS03255 0.12 +1.3 751,792 + PFLU_RS03255 0.12 -0.3 751,792 + PFLU_RS03255 0.12 +0.9 751,792 + PFLU_RS03255 0.12 -1.3 751,792 + PFLU_RS03255 0.12 +1.6 751,792 + PFLU_RS03255 0.12 -0.3 751,793 - PFLU_RS03255 0.12 +1.7 751,793 - PFLU_RS03255 0.12 -0.1 751,793 - PFLU_RS03255 0.12 +1.0 751,793 - PFLU_RS03255 0.12 +0.4 751,793 - PFLU_RS03255 0.12 -1.0 751,825 + PFLU_RS03255 0.15 +2.2 751,825 + PFLU_RS03255 0.15 +1.3 751,825 + PFLU_RS03255 0.15 -0.7 751,825 + PFLU_RS03255 0.15 +0.8 751,825 + PFLU_RS03255 0.15 -0.3 751,825 + PFLU_RS03255 0.15 +1.5 751,825 + PFLU_RS03255 0.15 -0.2 751,825 + PFLU_RS03255 0.15 +0.4 751,825 + PFLU_RS03255 0.15 +0.5 751,825 + PFLU_RS03255 0.15 +0.7 751,825 + PFLU_RS03255 0.15 -1.8 751,825 + PFLU_RS03255 0.15 -2.5 751,825 + PFLU_RS03255 0.15 -2.8 751,825 + PFLU_RS03255 0.15 +1.4 751,825 + PFLU_RS03255 0.15 -2.6 751,825 + PFLU_RS03255 0.15 -1.8 751,826 - PFLU_RS03255 0.15 -1.0 751,826 - PFLU_RS03255 0.15 +1.0 751,826 - PFLU_RS03255 0.15 -0.3 751,826 - PFLU_RS03255 0.15 -1.6 751,826 - PFLU_RS03255 0.15 +2.1 751,826 - PFLU_RS03255 0.15 +0.9 751,826 - PFLU_RS03255 0.15 +0.4 751,826 - PFLU_RS03255 0.15 -0.7 751,826 - PFLU_RS03255 0.15 +0.3 751,826 - PFLU_RS03255 0.15 +0.0 751,887 + PFLU_RS03255 0.20 +0.2 751,887 + PFLU_RS03255 0.20 +0.2 751,887 + PFLU_RS03255 0.20 +0.3 751,887 + PFLU_RS03255 0.20 +2.0 751,888 - PFLU_RS03255 0.20 +1.7 751,888 - PFLU_RS03255 0.20 -1.2 751,888 - PFLU_RS03255 0.20 +0.4 752,038 + PFLU_RS03255 0.32 -0.6 752,038 + PFLU_RS03255 0.32 -0.7 752,039 - PFLU_RS03255 0.32 -1.3 752,039 - PFLU_RS03255 0.32 -1.6 752,039 - PFLU_RS03255 0.32 +0.4 752,148 - PFLU_RS03255 0.42 -0.0 752,246 - PFLU_RS03255 0.50 +0.4 752,281 + PFLU_RS03255 0.53 +1.2 752,281 + PFLU_RS03255 0.53 +1.2 752,282 - PFLU_RS03255 0.53 -2.7 752,298 + PFLU_RS03255 0.54 +0.2 752,299 - PFLU_RS03255 0.54 +0.2 752,299 - PFLU_RS03255 0.54 -1.0 752,299 - PFLU_RS03255 0.54 -0.3 752,299 - PFLU_RS03255 0.54 -1.4 752,299 - PFLU_RS03255 0.54 -1.2 752,299 - PFLU_RS03255 0.54 +0.2 752,323 + PFLU_RS03255 0.56 -2.0 752,323 + PFLU_RS03255 0.56 +2.4 752,323 + PFLU_RS03255 0.56 -1.9 752,323 + PFLU_RS03255 0.56 -1.4 752,323 + PFLU_RS03255 0.56 +0.9 752,323 + PFLU_RS03255 0.56 -1.0 752,324 - PFLU_RS03255 0.56 -1.5 752,324 - PFLU_RS03255 0.56 -1.4 752,324 - PFLU_RS03255 0.56 +0.0 752,324 - PFLU_RS03255 0.56 -0.6 752,349 + PFLU_RS03255 0.58 +1.6 752,359 + PFLU_RS03255 0.59 -1.3 752,359 + PFLU_RS03255 0.59 -0.1 752,360 - PFLU_RS03255 0.59 -1.3 752,360 - PFLU_RS03255 0.59 +0.9 752,380 + PFLU_RS03255 0.61 -1.0 752,380 + PFLU_RS03255 0.61 +0.6 752,381 - PFLU_RS03255 0.61 +0.1 752,417 + PFLU_RS03255 0.64 +0.8 752,417 + PFLU_RS03255 0.64 +2.0 752,418 - PFLU_RS03255 0.64 -1.7 752,418 - PFLU_RS03255 0.64 -0.5 752,418 - PFLU_RS03255 0.64 -2.1 752,418 - PFLU_RS03255 0.64 -1.8 752,494 + PFLU_RS03255 0.71 -0.9 752,495 - PFLU_RS03255 0.71 -2.2 752,495 - PFLU_RS03255 0.71 +0.5 752,495 - PFLU_RS03255 0.71 +0.1 752,495 - PFLU_RS03255 0.71 +0.4
Or see this region's nucleotide sequence