Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS18405

Experiment: 4-Hydroxybenzoic Acid 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid 2 mM (C)
4,170,724	+		PFLU_RS18400	0.68	+0.3
4,170,840	+		PFLU_RS18400	0.73	-0.3
4,170,841	-		PFLU_RS18400	0.73	+0.5
4,171,043	+		PFLU_RS18400	0.82	-0.7
4,171,043	+		PFLU_RS18400	0.82	-1.5
4,171,043	+		PFLU_RS18400	0.82	+0.2
4,171,043	+		PFLU_RS18400	0.82	-2.1
4,171,112	+		PFLU_RS18400	0.85	+0.7
4,171,113	-		PFLU_RS18400	0.85	-0.7
4,171,127	+		PFLU_RS18400	0.86	+1.8
4,171,128	-		PFLU_RS18400	0.86	-1.4
4,171,128	-		PFLU_RS18400	0.86	+0.4
4,171,309	+				+0.4
4,171,309	+				+0.0
4,171,309	+				+2.2
4,171,309	+				+1.8
4,171,310	-				+0.3
4,171,310	-				-2.1
4,171,310	-				+1.3
4,171,491	+				+2.0
4,171,491	+				+1.0
4,171,491	+				+2.3
4,171,492	-				-1.1
4,171,492	-				+1.3
4,171,492	-				-1.3
4,171,528	+				-0.3
4,171,528	+				+0.7
4,171,528	+				-1.1
4,171,528	+				-1.4
4,171,529	-				-1.7
4,171,529	-				+1.6
4,171,529	-				+0.5
4,171,529	-				+1.3
4,171,529	-				-2.3
4,171,529	-				-0.3
4,171,529	-				+0.1
4,171,529	-				-0.7
4,171,541	+				+1.3
4,171,541	+				+1.1
4,171,541	+				-1.3
4,171,541	+				-1.2
4,171,541	+				-1.3
4,171,541	+				+0.4
4,171,541	+				-2.2
4,171,541	+				+1.0
4,171,542	-				+0.6
4,171,542	-				-0.6
4,171,542	-				-3.1
4,171,542	-				+0.3
4,171,542	-				+1.1
4,171,572	-				-0.2
4,171,585	+				-3.1
4,171,585	+				-2.4
4,171,585	+				-1.9
4,171,596	+				-1.3
4,171,596	+				+0.3
4,171,596	+				+0.3
4,171,596	+				-0.3
4,171,596	+				+0.8
4,171,596	+				+1.4
4,171,596	+				-1.3
4,171,596	+				+0.3
4,171,597	-				-2.3
4,171,597	-				+1.5
4,171,597	-				-0.1
4,171,597	-				-1.4
4,171,597	-				+0.5
4,171,597	-				+0.5
4,171,597	-				-1.1
4,171,597	-				+1.4
4,171,597	-				-0.3
4,171,597	-				-1.5
4,171,597	-				+1.0
4,171,636	+		PFLU_RS18405	0.12	+0.1
4,171,636	+		PFLU_RS18405	0.12	-0.0
4,171,636	+		PFLU_RS18405	0.12	-1.1
4,171,793	+		PFLU_RS18405	0.43	+0.4
4,171,793	+		PFLU_RS18405	0.43	-1.3
4,171,793	+		PFLU_RS18405	0.43	+0.5
4,171,794	-		PFLU_RS18405	0.43	+1.0
4,171,794	-		PFLU_RS18405	0.43	+0.3
4,171,794	-		PFLU_RS18405	0.43	-0.5
4,171,836	-		PFLU_RS18405	0.51	-0.2
4,171,854	-		PFLU_RS18405	0.55	-0.5
4,171,863	+		PFLU_RS18405	0.56	+1.3
4,171,863	+		PFLU_RS18405	0.56	-3.2
4,171,863	+		PFLU_RS18405	0.56	+1.5
4,171,863	+		PFLU_RS18405	0.56	+1.3
4,171,863	+		PFLU_RS18405	0.56	-0.3
4,171,863	+		PFLU_RS18405	0.56	-1.3
4,171,864	-		PFLU_RS18405	0.57	+0.5
4,171,864	-		PFLU_RS18405	0.57	-2.6
4,171,864	-		PFLU_RS18405	0.57	+0.5
4,171,864	-		PFLU_RS18405	0.57	-2.4
4,171,864	-		PFLU_RS18405	0.57	-1.5
4,171,864	-		PFLU_RS18405	0.57	-1.3
4,171,864	-		PFLU_RS18405	0.57	-1.1
4,171,864	-		PFLU_RS18405	0.57	-1.3
4,171,864	-		PFLU_RS18405	0.57	+1.0
4,171,864	-		PFLU_RS18405	0.57	+0.9
4,171,864	-		PFLU_RS18405	0.57	-2.4
4,171,954	+		PFLU_RS18405	0.74	-0.3
4,171,954	+		PFLU_RS18405	0.74	-1.5
4,171,955	-		PFLU_RS18405	0.74	-1.3
4,172,013	+		PFLU_RS18405	0.85	+1.5
4,172,014	-		PFLU_RS18405	0.86	-1.2
4,172,031	+		PFLU_RS18405	0.89	-0.7
4,172,032	-		PFLU_RS18405	0.89	+0.7
4,172,086	-				-1.3
4,172,173	-		PFLU_RS30910	0.33	-2.7
4,172,221	+		PFLU_RS30910	0.61	-1.7
4,172,245	+		PFLU_RS30910	0.75	+1.4
4,172,245	+		PFLU_RS30910	0.75	-0.2
4,172,246	-		PFLU_RS30910	0.75	-0.1
4,172,246	-		PFLU_RS30910	0.75	-0.7
4,172,247	+		PFLU_RS30910	0.76	+0.7
4,172,247	+		PFLU_RS30910	0.76	+0.0
4,172,247	+		PFLU_RS30910	0.76	+0.4
4,172,247	+		PFLU_RS30910	0.76	+1.6
4,172,247	+		PFLU_RS30910	0.76	-0.3
4,172,247	+		PFLU_RS30910	0.76	+0.0
4,172,247	+		PFLU_RS30910	0.76	-2.2
4,172,247	+		PFLU_RS30910	0.76	-1.9
4,172,247	+		PFLU_RS30910	0.76	+1.4
4,172,247	+		PFLU_RS30910	0.76	-2.4
4,172,247	+		PFLU_RS30910	0.76	+1.3
4,172,247	+		PFLU_RS30910	0.76	-1.6
4,172,247	+		PFLU_RS30910	0.76	-1.0
4,172,247	+		PFLU_RS30910	0.76	-0.7
4,172,248	-		PFLU_RS30910	0.76	-2.1
4,172,248	-		PFLU_RS30910	0.76	+0.8
4,172,248	-		PFLU_RS30910	0.76	+1.7
4,172,248	-		PFLU_RS30910	0.76	-0.7
4,172,248	-		PFLU_RS30910	0.76	+1.3
4,172,248	-		PFLU_RS30910	0.76	-1.3
4,172,248	-		PFLU_RS30910	0.76	+0.5
4,172,248	-		PFLU_RS30910	0.76	-0.5
4,172,248	-		PFLU_RS30910	0.76	+0.6
4,172,248	-		PFLU_RS30910	0.76	-2.6
4,172,248	-		PFLU_RS30910	0.76	-1.7
4,172,248	-		PFLU_RS30910	0.76	+0.7
4,172,248	-		PFLU_RS30910	0.76	-0.0
4,172,248	-		PFLU_RS30910	0.76	+0.8
4,172,290	+				-3.4
4,172,291	-				-2.2
4,172,291	-				-2.8
4,172,291	-				+0.8
4,172,314	+				-2.6
4,172,315	-				+0.3
4,172,315	-				-2.1
4,172,334	+				-1.3
4,172,345	+				-2.6
4,172,352	+				+0.7
4,172,352	+				-1.5
4,172,352	+				-0.7
4,172,353	-				+0.9
4,172,353	-				-0.2
4,172,491	-				-6.2
4,172,494	+				-1.5
4,172,494	+				-1.3
4,172,494	+				-3.2
4,172,494	+				+1.7
4,172,494	+				-2.2
4,172,494	+				-2.1
4,172,495	-				-5.1
4,172,495	-				-5.8
4,172,495	-				-6.3
4,172,495	-				-5.0
4,172,495	-				-3.4
4,172,495	-				-6.7
4,172,495	-				-8.4
4,172,495	-				-5.4
4,172,539	+				-6.8
4,172,539	+				-10.2
4,172,539	+				-8.0
4,172,539	+				-6.0
4,172,540	-				-5.4
4,172,540	-				-3.3
4,172,551	+				-7.3
4,172,551	+				-4.5
4,172,566	+				-10.0
4,172,567	-				-11.3
4,172,569	+				-11.6
4,172,569	+				-10.4
4,172,604	+				-10.3
4,172,604	+				-6.3
4,172,604	+				-9.7
4,172,604	+				-10.4
4,172,604	+				-8.3
4,172,605	-				-10.6
4,172,605	-				-11.8
4,172,893	-		PFLU_RS18410	0.14	-9.2