Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21780

Experiment: 4-Hydroxybenzoic Acid 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid 2 mM (C)
4,902,910	+		PFLU_RS21775	0.54	-1.6
4,902,910	+		PFLU_RS21775	0.54	-0.4
4,902,910	+		PFLU_RS21775	0.54	-2.4
4,902,911	-		PFLU_RS21775	0.54	-0.6
4,902,911	-		PFLU_RS21775	0.54	+0.2
4,902,911	-		PFLU_RS21775	0.54	-0.8
4,902,944	+		PFLU_RS21775	0.55	+0.5
4,902,944	+		PFLU_RS21775	0.55	-1.0
4,902,944	+		PFLU_RS21775	0.55	-0.9
4,902,944	+		PFLU_RS21775	0.55	-1.3
4,902,944	+		PFLU_RS21775	0.55	-0.6
4,902,945	-		PFLU_RS21775	0.56	-0.8
4,902,945	-		PFLU_RS21775	0.56	-2.2
4,902,945	-		PFLU_RS21775	0.56	-3.0
4,902,945	-		PFLU_RS21775	0.56	-2.0
4,902,945	-		PFLU_RS21775	0.56	-1.2
4,902,945	-		PFLU_RS21775	0.56	-1.4
4,902,945	-		PFLU_RS21775	0.56	-1.7
4,902,945	-		PFLU_RS21775	0.56	-2.7
4,902,945	-		PFLU_RS21775	0.56	-2.4
4,902,972	+		PFLU_RS21775	0.57	-2.3
4,902,973	-		PFLU_RS21775	0.57	+0.9
4,902,973	-		PFLU_RS21775	0.57	-1.1
4,902,986	-		PFLU_RS21775	0.58	+0.4
4,903,125	+		PFLU_RS21775	0.66	+1.4
4,903,126	-		PFLU_RS21775	0.66	-1.7
4,903,126	-		PFLU_RS21775	0.66	-1.7
4,903,126	-		PFLU_RS21775	0.66	-0.9
4,903,126	-		PFLU_RS21775	0.66	+0.3
4,903,425	+		PFLU_RS21775	0.82	-1.9
4,903,425	+		PFLU_RS21775	0.82	-1.6
4,903,425	+		PFLU_RS21775	0.82	-3.3
4,903,425	+		PFLU_RS21775	0.82	-0.8
4,903,426	-		PFLU_RS21775	0.83	-3.9
4,903,426	-		PFLU_RS21775	0.83	-1.4
4,903,426	-		PFLU_RS21775	0.83	-0.7
4,903,426	-		PFLU_RS21775	0.83	-1.3
4,903,426	-		PFLU_RS21775	0.83	-0.8
4,903,426	-		PFLU_RS21775	0.83	-1.1
4,903,426	-		PFLU_RS21775	0.83	-2.3
4,903,474	+		PFLU_RS21775	0.85	-1.1
4,903,474	+		PFLU_RS21775	0.85	-2.2
4,903,475	-		PFLU_RS21775	0.85	-2.4
4,903,475	-		PFLU_RS21775	0.85	-1.4
4,903,540	+		PFLU_RS21775	0.89	-1.5
4,903,540	+		PFLU_RS21775	0.89	-0.9
4,903,540	+		PFLU_RS21775	0.89	-1.1
4,903,540	+		PFLU_RS21775	0.89	-1.8
4,903,541	-		PFLU_RS21775	0.89	-3.8
4,903,541	-		PFLU_RS21775	0.89	-1.4
4,903,541	-		PFLU_RS21775	0.89	-2.1
4,903,541	-		PFLU_RS21775	0.89	-0.9
4,903,541	-		PFLU_RS21775	0.89	-1.6
4,903,541	-		PFLU_RS21775	0.89	-0.0
4,903,541	-		PFLU_RS21775	0.89	-2.1
4,903,541	-		PFLU_RS21775	0.89	-3.1
4,903,541	-		PFLU_RS21775	0.89	-1.1
4,903,741	+				+0.3
4,903,741	+				-2.0
4,903,741	+				-1.1
4,903,741	+				-0.9
4,903,742	-				-0.2
4,903,742	-				-1.3
4,903,742	-				-0.4
4,903,742	-				-1.8
4,903,742	-				-1.5
4,903,742	-				-1.3
4,903,754	+				-1.1
4,903,755	-				-2.6
4,903,781	+				-1.1
4,903,781	+				-3.9
4,903,781	+				-0.9
4,903,782	-				-1.2
4,903,800	+		PFLU_RS21780	0.14	-1.2
4,903,800	+		PFLU_RS21780	0.14	-1.4
4,903,800	+		PFLU_RS21780	0.14	-0.9
4,903,800	+		PFLU_RS21780	0.14	-1.6
4,903,800	+		PFLU_RS21780	0.14	-3.1
4,903,801	-		PFLU_RS21780	0.15	-0.6
4,903,801	-		PFLU_RS21780	0.15	-2.1
4,903,801	-		PFLU_RS21780	0.15	-2.0
4,903,801	-		PFLU_RS21780	0.15	-1.6
4,903,864	-		PFLU_RS21780	0.34	-3.4
4,904,044	-		PFLU_RS21780	0.88	-3.0
4,904,121	+				-1.7
4,904,121	+				-0.6
4,904,122	-				-0.6
4,904,132	+				-1.2
4,904,132	+				-1.1
4,904,132	+				-0.4
4,904,132	+				-2.7
4,904,132	+				-2.7
4,904,132	+				+1.4
4,904,132	+				-0.3
4,904,133	-				-0.1
4,904,133	-				-1.4
4,904,133	-				-0.1
4,904,135	+				-1.8
4,904,143	+				-0.4
4,904,143	+				-1.3
4,904,143	+				-2.4
4,904,143	+				-1.5
4,904,143	+				-1.5
4,904,144	-				+0.7
4,904,144	-				+1.0
4,904,144	-				+0.6
4,904,144	-				-0.9
4,904,215	+				+1.2
4,904,215	+				+1.2
4,904,215	+				+0.9
4,904,215	+				+1.2
4,904,215	+				-0.6
4,904,215	+				+0.7
4,904,215	+				-2.7
4,904,215	+				-1.7
4,904,216	-				+0.1
4,904,216	-				+1.2
4,904,216	-				+0.7
4,904,216	-				-2.0
4,904,216	-				+1.0
4,904,216	-				+0.4
4,904,216	-				+0.4
4,904,216	-				-1.7
4,904,230	+				-0.4
4,904,230	+				-0.9
4,904,230	+				-0.9
4,904,230	+				-0.1
4,904,230	+				+0.6
4,904,230	+				+1.2
4,904,231	-				+1.1
4,904,231	-				-2.3
4,904,276	-				+0.5
4,904,276	-				-1.9
4,904,569	+		PFLU_RS21785	0.26	-0.4
4,904,570	-		PFLU_RS21785	0.26	+0.9
4,904,726	-		PFLU_RS21785	0.37	+0.7
4,905,082	+		PFLU_RS21785	0.63	-0.3
4,905,082	+		PFLU_RS21785	0.63	-2.1
4,905,082	+		PFLU_RS21785	0.63	-0.8
4,905,082	+		PFLU_RS21785	0.63	-0.9
4,905,082	+		PFLU_RS21785	0.63	+0.4
4,905,082	+		PFLU_RS21785	0.63	-3.2
4,905,082	+		PFLU_RS21785	0.63	-0.9
4,905,082	+		PFLU_RS21785	0.63	+0.3
4,905,082	+		PFLU_RS21785	0.63	-1.3