Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS20840

Experiment: 4-Hydroxybenzoic Acid 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid 2 mM (C)
4,685,354	+		PFLU_RS20835	0.64	+1.0
4,685,462	-		PFLU_RS20835	0.70	-0.2
4,685,489	+		PFLU_RS20835	0.72	-0.2
4,685,590	-		PFLU_RS20835	0.79	+0.8
4,685,594	-		PFLU_RS20835	0.79	+1.5
4,685,730	-		PFLU_RS20835	0.87	-1.3
4,685,759	-		PFLU_RS20835	0.89	+1.4
4,685,774	+				-1.2
4,685,790	+				-1.6
4,685,914	-				-1.5
4,685,968	+				+0.6
4,685,969	-				-1.8
4,686,100	-				+0.7
4,686,100	-				-1.6
4,686,112	+				+0.9
4,686,130	-				+1.4
4,686,209	+				+0.3
4,686,209	+				-0.4
4,686,209	+				+1.8
4,686,210	-				+0.9
4,686,210	-				-1.6
4,686,210	-				-1.6
4,686,244	-				-0.7
4,686,354	+				+0.4
4,686,354	+				-0.4
4,686,354	+				-0.9
4,686,354	+				-1.4
4,686,354	+				+0.9
4,686,354	+				+0.9
4,686,354	+				+0.3
4,686,355	-				-0.6
4,686,408	+				+0.5
4,686,552	+		PFLU_RS20840	0.29	-1.0
4,686,552	+		PFLU_RS20840	0.29	-1.8
4,686,553	-		PFLU_RS20840	0.29	+1.5
4,686,553	-		PFLU_RS20840	0.29	+1.8
4,686,683	-		PFLU_RS20840	0.48	-2.4
4,686,684	+		PFLU_RS20840	0.48	+1.5
4,686,685	-		PFLU_RS20840	0.49	-0.8
4,686,685	-		PFLU_RS20840	0.49	-2.2
4,686,685	-		PFLU_RS20840	0.49	+1.5
4,686,846	+		PFLU_RS20840	0.72	+0.5
4,686,846	+		PFLU_RS20840	0.72	+1.6
4,686,847	-		PFLU_RS20840	0.72	-1.7
4,686,847	-		PFLU_RS20840	0.72	-0.4
4,686,856	+		PFLU_RS20840	0.74	-1.6
4,686,856	+		PFLU_RS20840	0.74	-0.1
4,686,857	-		PFLU_RS20840	0.74	+0.3
4,686,857	-		PFLU_RS20840	0.74	-0.2
4,686,857	-		PFLU_RS20840	0.74	-0.2
4,686,875	+		PFLU_RS20840	0.76	+0.1
4,686,876	-		PFLU_RS20840	0.76	-0.4
4,686,876	-		PFLU_RS20840	0.76	+1.1
4,686,930	+		PFLU_RS20840	0.84	+0.4
4,686,930	+		PFLU_RS20840	0.84	+0.5
4,686,930	+		PFLU_RS20840	0.84	+0.0
4,686,930	+		PFLU_RS20840	0.84	-0.2
4,686,930	+		PFLU_RS20840	0.84	+1.9
4,686,930	+		PFLU_RS20840	0.84	+0.3
4,686,930	+		PFLU_RS20840	0.84	-1.2
4,686,930	+		PFLU_RS20840	0.84	-1.2
4,686,930	+		PFLU_RS20840	0.84	+0.6
4,686,931	-		PFLU_RS20840	0.85	+0.3
4,686,931	-		PFLU_RS20840	0.85	-1.1
4,686,931	-		PFLU_RS20840	0.85	+1.2
4,686,931	-		PFLU_RS20840	0.85	-2.1
4,686,931	-		PFLU_RS20840	0.85	-1.6
4,686,936	+		PFLU_RS20840	0.85	+0.4
4,686,936	+		PFLU_RS20840	0.85	+1.2
4,686,966	+		PFLU_RS20840	0.90	+1.1
4,686,992	-				+0.2
4,687,000	-				-0.2
4,687,000	-				+0.7
4,687,000	-				+1.4
4,687,002	+				+0.0
4,687,003	-				+0.4
4,687,015	-				-0.9
4,687,106	+				-0.3
4,687,106	+				-1.4
4,687,106	+				-1.0
4,687,106	+				-1.6
4,687,107	-				-1.7
4,687,113	+				-0.2
4,687,143	+				-1.6
4,687,143	+				+1.8
4,687,144	-				+0.8
4,687,201	+				+0.6
4,687,202	-				+2.1
4,687,313	+		PFLU_RS20845	0.53	+2.4
4,687,313	+		PFLU_RS20845	0.53	-1.1
4,687,313	+		PFLU_RS20845	0.53	+1.4
4,687,314	-		PFLU_RS20845	0.53	+1.5
4,687,314	-		PFLU_RS20845	0.53	-0.6
4,687,447	+				-1.7
4,687,448	-				-1.2
4,687,817	+		PFLU_RS20850	0.53	-0.3
4,687,817	+		PFLU_RS20850	0.53	+0.2
4,687,817	+		PFLU_RS20850	0.53	-3.5
4,687,817	+		PFLU_RS20850	0.53	-0.2
4,687,818	-		PFLU_RS20850	0.54	-0.6
4,687,818	-		PFLU_RS20850	0.54	+0.9
4,687,835	+		PFLU_RS20850	0.58	-1.5
4,687,835	+		PFLU_RS20850	0.58	-2.3
4,687,835	+		PFLU_RS20850	0.58	-2.7
4,687,835	+		PFLU_RS20850	0.58	+1.7
4,687,836	-		PFLU_RS20850	0.58	+1.2
4,687,836	-		PFLU_RS20850	0.58	+2.0
4,687,836	-		PFLU_RS20850	0.58	-0.2
4,687,836	-		PFLU_RS20850	0.58	+1.0
4,687,836	-		PFLU_RS20850	0.58	+1.8
4,687,874	+		PFLU_RS20850	0.68	+2.2
4,687,875	-		PFLU_RS20850	0.68	+1.2
4,687,898	+		PFLU_RS20850	0.74	-1.4
4,687,898	+		PFLU_RS20850	0.74	-0.8
4,687,899	-		PFLU_RS20850	0.74	-1.9
4,687,900	+		PFLU_RS20850	0.74	+0.2
4,687,900	+		PFLU_RS20850	0.74	+0.5
4,687,901	-		PFLU_RS20850	0.74	+0.2
4,687,901	-		PFLU_RS20850	0.74	-0.2
4,687,901	-		PFLU_RS20850	0.74	-0.6
4,687,901	-		PFLU_RS20850	0.74	-0.2
4,687,901	-		PFLU_RS20850	0.74	-2.7
4,687,901	-		PFLU_RS20850	0.74	+1.6
4,687,901	-		PFLU_RS20850	0.74	+0.5
4,687,901	-		PFLU_RS20850	0.74	-0.9
4,688,022	+				-0.2
4,688,022	+				-0.0
4,688,022	+				+1.8
4,688,022	+				-2.2
4,688,023	-				-0.1
4,688,023	-				+0.1
4,688,023	-				+0.9
4,688,023	-				+0.2
4,688,023	-				-0.9
4,688,023	-				-2.4
4,688,023	-				+0.1
4,688,023	-				-1.2
4,688,023	-				+1.5
4,688,023	-				-1.0