Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS18635

Experiment: 4-Hydroxybenzoic Acid 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid 2 mM (C)
4,216,297	-		PFLU_RS18625	0.77	+1.2
4,216,297	-		PFLU_RS18625	0.77	-0.4
4,216,383	+		PFLU_RS18625	0.82	+1.2
4,216,383	+		PFLU_RS18625	0.82	+1.2
4,216,384	-		PFLU_RS18625	0.82	+0.2
4,216,542	+				+0.2
4,216,542	+				+0.2
4,216,543	-				+1.2
4,216,543	-				+1.2
4,216,543	-				-0.4
4,216,546	-				-0.8
4,216,546	-				+1.2
4,216,576	-				+3.2
4,216,674	-				-1.1
4,216,707	+				-0.4
4,216,794	-		PFLU_RS18630	0.16	-0.4
4,216,875	-		PFLU_RS18630	0.33	-1.1
4,216,935	-		PFLU_RS18630	0.45	+1.2
4,217,001	-		PFLU_RS18630	0.58	+0.2
4,217,485	+		PFLU_RS18635	0.21	-0.4
4,217,614	+		PFLU_RS18635	0.30	+1.2
4,217,636	-		PFLU_RS18635	0.32	+0.2
4,217,636	-		PFLU_RS18635	0.32	-0.4
4,217,761	+		PFLU_RS18635	0.41	+0.2
4,217,762	-		PFLU_RS18635	0.41	+1.2
4,217,763	+		PFLU_RS18635	0.41	+1.2
4,217,763	+		PFLU_RS18635	0.41	-0.4
4,217,763	+		PFLU_RS18635	0.41	+0.2
4,217,763	+		PFLU_RS18635	0.41	-0.4
4,217,763	+		PFLU_RS18635	0.41	-1.1
4,217,763	+		PFLU_RS18635	0.41	+0.2
4,217,764	-		PFLU_RS18635	0.41	+1.2
4,217,764	-		PFLU_RS18635	0.41	+1.2
4,218,088	+		PFLU_RS18635	0.65	+1.2
4,218,164	-		PFLU_RS18635	0.71	+0.2
4,218,164	-		PFLU_RS18635	0.71	-0.8
4,218,476	-				+0.2
4,218,548	+				-2.0
4,218,548	+				+0.4
4,218,549	-				+2.8
4,218,549	-				+0.2
4,218,566	+				-2.0
4,218,566	+				+0.6
4,218,641	+				+0.2
4,218,641	+				+1.8
4,218,641	+				-0.1
4,218,642	-				+0.2
4,218,715	-				+0.2
4,218,757	-				-0.8
4,218,757	-				-0.8
4,218,854	+				+1.2
4,218,855	-				+0.2
4,218,883	+				+0.2
4,219,180	+		PFLU_RS18640	0.18	+1.2
4,219,181	-		PFLU_RS18640	0.18	+1.2
4,219,188	-		PFLU_RS18640	0.18	-0.4
4,219,213	-		PFLU_RS18640	0.19	+1.2
4,219,235	+		PFLU_RS18640	0.20	+1.2
4,219,236	-		PFLU_RS18640	0.20	+0.2
4,219,340	+		PFLU_RS18640	0.24	-0.4
4,219,348	+		PFLU_RS18640	0.24	+1.2
4,219,348	+		PFLU_RS18640	0.24	-0.8
4,219,349	-		PFLU_RS18640	0.24	+1.2
4,219,475	+		PFLU_RS18640	0.29	-0.8
4,219,476	-		PFLU_RS18640	0.29	+0.2
4,219,512	-		PFLU_RS18640	0.30	+0.2