Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS17265

Experiment: 4-Hydroxybenzoic Acid 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid 2 mM (C)
3,927,161	+		PFLU_RS17260	0.67	+0.4
3,927,161	+		PFLU_RS17260	0.67	+0.0
3,927,161	+		PFLU_RS17260	0.67	-2.6
3,927,162	-		PFLU_RS17260	0.67	-1.5
3,927,162	-		PFLU_RS17260	0.67	+1.6
3,927,162	-		PFLU_RS17260	0.67	-0.2
3,927,250	+		PFLU_RS17260	0.72	+0.4
3,927,278	+		PFLU_RS17260	0.73	+0.9
3,927,278	+		PFLU_RS17260	0.73	-0.3
3,927,348	+		PFLU_RS17260	0.76	+0.8
3,927,348	+		PFLU_RS17260	0.76	+2.3
3,927,349	-		PFLU_RS17260	0.76	-1.1
3,927,497	+		PFLU_RS17260	0.83	+0.2
3,927,498	-		PFLU_RS17260	0.83	+2.2
3,927,510	+		PFLU_RS17260	0.84	+1.2
3,927,511	-		PFLU_RS17260	0.84	+0.0
3,927,588	+		PFLU_RS17260	0.88	+1.5
3,927,588	+		PFLU_RS17260	0.88	+0.2
3,927,588	+		PFLU_RS17260	0.88	+1.3
3,927,588	+		PFLU_RS17260	0.88	-0.1
3,927,588	+		PFLU_RS17260	0.88	+1.0
3,927,588	+		PFLU_RS17260	0.88	-1.6
3,927,588	+		PFLU_RS17260	0.88	-1.8
3,927,588	+		PFLU_RS17260	0.88	-0.6
3,927,588	+		PFLU_RS17260	0.88	-1.0
3,927,588	+		PFLU_RS17260	0.88	-1.6
3,927,588	+		PFLU_RS17260	0.88	-1.0
3,927,588	+		PFLU_RS17260	0.88	-3.6
3,927,589	-		PFLU_RS17260	0.88	+1.9
3,927,589	-		PFLU_RS17260	0.88	-1.7
3,927,589	-		PFLU_RS17260	0.88	+0.9
3,927,589	-		PFLU_RS17260	0.88	+0.4
3,927,589	-		PFLU_RS17260	0.88	+0.0
3,927,589	-		PFLU_RS17260	0.88	-0.8
3,927,589	-		PFLU_RS17260	0.88	+1.0
3,927,589	-		PFLU_RS17260	0.88	-2.4
3,927,589	-		PFLU_RS17260	0.88	+0.9
3,927,589	-		PFLU_RS17260	0.88	+2.4
3,927,589	-		PFLU_RS17260	0.88	-0.8
3,927,589	-		PFLU_RS17260	0.88	+0.4
3,927,589	-		PFLU_RS17260	0.88	+0.0
3,927,589	-		PFLU_RS17260	0.88	+0.7
3,927,590	+		PFLU_RS17260	0.88	-1.0
3,927,590	+		PFLU_RS17260	0.88	-1.1
3,927,590	+		PFLU_RS17260	0.88	+0.6
3,927,591	-		PFLU_RS17260	0.88	-1.7
3,927,591	-		PFLU_RS17260	0.88	+2.0
3,927,591	-		PFLU_RS17260	0.88	+3.0
3,927,591	-		PFLU_RS17260	0.88	-0.7
3,927,591	-		PFLU_RS17260	0.88	+0.8
3,927,906	+				+0.9
3,927,907	-				+0.5
3,927,907	-				-1.6
3,927,907	-				-0.8
3,927,949	+				+1.0
3,927,949	+				-2.1
3,927,950	-				+0.7
3,927,950	-				-3.1
3,927,999	+				+1.4
3,927,999	+				-1.6
3,927,999	+				-0.8
3,928,000	-				+0.8
3,928,088	-				+0.3
3,928,088	-				-1.8
3,928,111	+				-2.0
3,928,172	-		PFLU_RS17265	0.24	-2.8
3,928,224	-		PFLU_RS17265	0.39	-1.6
3,928,354	+		PFLU_RS17265	0.79	-2.3
3,928,355	-		PFLU_RS17265	0.79	+0.4
3,928,488	+				+0.4
3,928,488	+				-1.0
3,928,488	+				-0.1
3,928,488	+				-0.8
3,928,488	+				-1.6
3,928,488	+				+1.9
3,928,489	-				-1.9
3,928,489	-				-0.7
3,928,489	-				-0.0
3,928,489	-				+0.8
3,928,489	-				-2.3
3,928,621	+		PFLU_RS17270	0.23	+0.0
3,928,621	+		PFLU_RS17270	0.23	+0.2
3,928,621	+		PFLU_RS17270	0.23	-2.3
3,928,621	+		PFLU_RS17270	0.23	+1.4
3,928,621	+		PFLU_RS17270	0.23	-1.8
3,928,622	-		PFLU_RS17270	0.23	-0.9
3,928,622	-		PFLU_RS17270	0.23	+0.6
3,928,622	-		PFLU_RS17270	0.23	+0.0
3,928,622	-		PFLU_RS17270	0.23	+1.0
3,928,622	-		PFLU_RS17270	0.23	+1.7
3,928,622	-		PFLU_RS17270	0.23	-0.4
3,928,622	-		PFLU_RS17270	0.23	+0.9
3,928,622	-		PFLU_RS17270	0.23	-1.0
3,928,622	-		PFLU_RS17270	0.23	+1.7
3,928,642	+		PFLU_RS17270	0.25	-1.0
3,928,643	-		PFLU_RS17270	0.25	+0.0
3,928,643	-		PFLU_RS17270	0.25	+1.0
3,928,696	+		PFLU_RS17270	0.32	-1.6
3,928,697	-		PFLU_RS17270	0.32	-0.2
3,928,741	-		PFLU_RS17270	0.37	+1.0
3,928,752	+		PFLU_RS17270	0.38	+1.0
3,928,752	+		PFLU_RS17270	0.38	-1.4
3,928,753	-		PFLU_RS17270	0.38	+0.1
3,928,753	-		PFLU_RS17270	0.38	-0.8
3,928,817	+		PFLU_RS17270	0.46	+0.6
3,928,818	-		PFLU_RS17270	0.46	-2.7
3,928,864	+		PFLU_RS17270	0.52	+0.6
3,928,864	+		PFLU_RS17270	0.52	-0.7
3,928,865	-		PFLU_RS17270	0.52	+0.0
3,928,865	-		PFLU_RS17270	0.52	+1.9
3,929,008	-		PFLU_RS17270	0.69	+2.3
3,929,074	+		PFLU_RS17270	0.76	-0.7
3,929,075	-		PFLU_RS17270	0.76	+0.0
3,929,075	-		PFLU_RS17270	0.76	+1.0
3,929,075	-		PFLU_RS17270	0.76	-2.7
3,929,075	-		PFLU_RS17270	0.76	+2.3
3,929,075	-		PFLU_RS17270	0.76	-0.4
3,929,082	+		PFLU_RS17270	0.77	-2.1
3,929,082	+		PFLU_RS17270	0.77	-2.9
3,929,082	+		PFLU_RS17270	0.77	+0.1
3,929,083	-		PFLU_RS17270	0.77	+0.2
3,929,083	-		PFLU_RS17270	0.77	+0.6
3,929,083	-		PFLU_RS17270	0.77	+1.8
3,929,083	-		PFLU_RS17270	0.77	+1.0
3,929,083	-		PFLU_RS17270	0.77	-0.6
3,929,186	-		PFLU_RS17270	0.90	+0.4
3,929,186	-		PFLU_RS17270	0.90	+0.2
3,929,406	+		PFLU_RS17275	0.18	-2.3
3,929,406	+		PFLU_RS17275	0.18	+1.8