Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08125

Experiment: 4-Hydroxybenzoic Acid 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid 2 mM (C)
1,812,646	+				+1.5
1,812,646	+				+2.0
1,812,646	+				-0.9
1,812,646	+				+0.5
1,812,646	+				-0.9
1,812,646	+				-1.1
1,812,646	+				-0.1
1,812,646	+				+0.7
1,812,646	+				+2.5
1,812,646	+				-0.5
1,812,646	+				+2.0
1,812,646	+				-0.1
1,812,646	+				-0.5
1,812,737	+				+0.5
1,812,738	-				-1.3
1,812,738	-				+0.1
1,812,738	-				+0.7
1,812,738	-				+2.0
1,812,738	-				+0.9
1,812,738	-				+1.6
1,812,738	-				-0.1
1,812,738	-				-2.0
1,812,738	-				+0.8
1,812,738	-				+1.9
1,812,738	-				-0.3
1,812,738	-				-0.0
1,812,738	-				+2.8
1,812,738	-				-1.6
1,812,758	+				+1.5
1,812,758	+				-0.9
1,812,759	-				+1.3
1,812,759	-				-0.9
1,812,759	-				-1.4
1,812,759	-				-2.9
1,812,759	-				+0.4
1,812,759	-				-0.7
1,812,759	-				-1.0
1,812,760	+				+0.3
1,812,760	+				+0.7
1,812,760	+				+0.5
1,812,760	+				-1.9
1,812,760	+				-0.4
1,812,760	+				-1.3
1,812,760	+				-0.5
1,812,760	+				-3.3
1,812,760	+				-1.7
1,812,760	+				-1.5
1,812,761	-				+0.1
1,812,761	-				-0.3
1,812,761	-				-0.2
1,812,761	-				-0.5
1,812,761	-				+1.8
1,812,761	-				-0.5
1,812,766	+				-1.5
1,812,822	+				-0.0
1,812,822	+				-1.1
1,812,822	+				-1.9
1,812,823	-				+0.7
1,812,823	-				-0.5
1,812,823	-				-1.0
1,812,823	-				-2.0
1,812,823	-				-1.0
1,812,823	-				-0.2
1,812,827	+				+0.6
1,812,827	+				+2.2
1,812,827	+				-1.2
1,812,827	+				+0.4
1,812,827	+				+0.7
1,812,827	+				+0.5
1,812,827	+				-0.5
1,812,827	+				+0.5
1,812,828	-				+2.5
1,812,828	-				-1.1
1,812,828	-				+2.3
1,812,828	-				+1.0
1,812,828	-				-2.0
1,812,828	-				-1.1
1,812,830	+				+0.1
1,812,831	-				+0.0
1,812,886	-		PFLU_RS08120	0.26	-1.5
1,812,933	+		PFLU_RS08120	0.43	+1.7
1,812,933	+		PFLU_RS08120	0.43	-1.1
1,812,933	+		PFLU_RS08120	0.43	-2.0
1,812,933	+		PFLU_RS08120	0.43	-0.9
1,812,934	-		PFLU_RS08120	0.43	-0.7
1,812,934	-		PFLU_RS08120	0.43	-0.3
1,812,934	-		PFLU_RS08120	0.43	-0.9
1,812,934	-		PFLU_RS08120	0.43	-0.9
1,812,985	+		PFLU_RS08120	0.61	-1.3
1,812,986	-		PFLU_RS08120	0.61	+1.1
1,812,986	-		PFLU_RS08120	0.61	+1.2
1,812,986	-		PFLU_RS08120	0.61	+1.0
1,812,986	-		PFLU_RS08120	0.61	+0.1
1,813,033	+		PFLU_RS08120	0.78	-3.2
1,813,033	+		PFLU_RS08120	0.78	+1.5
1,813,033	+		PFLU_RS08120	0.78	-0.3
1,813,034	-		PFLU_RS08120	0.78	+1.2
1,813,034	-		PFLU_RS08120	0.78	+1.9
1,813,123	+				-0.5
1,813,124	-				-0.9
1,813,124	-				-0.8
1,813,128	-				-0.1
1,813,361	+		PFLU_RS08125	0.45	-1.5
1,813,361	+		PFLU_RS08125	0.45	-1.5
1,813,361	+		PFLU_RS08125	0.45	-3.1
1,813,361	+		PFLU_RS08125	0.45	-0.9
1,813,361	+		PFLU_RS08125	0.45	-2.7
1,813,362	-		PFLU_RS08125	0.45	-1.0
1,813,362	-		PFLU_RS08125	0.45	-2.4
1,813,362	-		PFLU_RS08125	0.45	+0.5
1,813,362	-		PFLU_RS08125	0.45	-1.5
1,813,531	-				+0.2
1,813,549	+				-1.9
1,813,549	+				+1.2
1,813,549	+				-0.3
1,813,550	-				-1.1
1,813,555	+				-0.1
1,813,556	-				-0.1
1,813,576	+		PFLU_RS30500	0.11	+1.5
1,813,584	+		PFLU_RS30500	0.14	+1.1
1,813,584	+		PFLU_RS30500	0.14	-1.1
1,813,584	+		PFLU_RS30500	0.14	-1.5
1,813,584	+		PFLU_RS30500	0.14	-1.4
1,813,585	-		PFLU_RS30500	0.15	+1.5
1,813,585	-		PFLU_RS30500	0.15	+0.5
1,813,585	-		PFLU_RS30500	0.15	-1.5
1,813,585	-		PFLU_RS30500	0.15	+2.0
1,813,585	-		PFLU_RS30500	0.15	+0.5
1,813,585	-		PFLU_RS30500	0.15	-1.5
1,813,591	-		PFLU_RS30500	0.17	-0.2
1,813,602	+		PFLU_RS30500	0.22	+0.3
1,813,643	-		PFLU_RS30500	0.39	+0.2
1,813,734	+		PFLU_RS30500	0.77	+1.5
1,813,737	+		PFLU_RS30500	0.78	+0.6
1,813,738	-		PFLU_RS30500	0.78	-0.5
1,813,738	-		PFLU_RS30500	0.78	+2.5
1,813,783	+				-1.1
1,813,783	+				+0.5
1,813,783	+				-0.1
1,813,783	+				-0.9
1,813,787	+				-0.5
1,813,788	-				+0.3
1,813,788	-				-0.2
1,813,808	-				+0.0
1,813,899	+				-0.3
1,813,924	+				-0.9
1,813,971	-				+1.5
1,813,988	+				+0.7
1,813,989	-				+1.5
1,814,003	+				+0.2
1,814,038	-				+1.6
1,814,133	+				-1.7
1,814,160	-				-2.2
1,814,192	+				-0.1
1,814,193	-				+3.0
1,814,193	-				+2.4
1,814,211	+				-0.3
1,814,211	+				+0.1
1,814,212	-				+2.7
1,814,227	-				-0.4
1,814,251	+				-1.6
1,814,284	-				+1.8
1,814,284	-				+0.9
1,814,287	+				-1.1
1,814,287	+				-2.9
1,814,288	-				-0.5
1,814,405	-				-0.5
1,814,407	+				-1.5
1,814,408	-				+1.8
1,814,481	+				-2.9
1,814,482	-				+1.5
1,814,496	-				+0.5
1,814,517	+				-0.9
1,814,520	-				+1.9
1,814,524	+				-0.1
1,814,524	+				+0.7
1,814,524	+				-2.7