Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_6010

Experiment: nitrogen source nitrite 0.5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrite 0.5mM
6,825,613	+		Pf6N2E2_6008	0.66	+0.4
6,825,613	+		Pf6N2E2_6008	0.66	+0.1
6,825,613	+		Pf6N2E2_6008	0.66	-0.1
6,825,613	+		Pf6N2E2_6008	0.66	+0.7
6,825,614	-		Pf6N2E2_6008	0.66	+0.0
6,825,677	+		Pf6N2E2_6008	0.73	-0.6
6,825,677	+		Pf6N2E2_6008	0.73	+0.8
6,825,677	+		Pf6N2E2_6008	0.73	-0.4
6,825,677	+		Pf6N2E2_6008	0.73	-0.3
6,825,677	+		Pf6N2E2_6008	0.73	-0.3
6,825,678	-		Pf6N2E2_6008	0.73	-1.5
6,825,678	-		Pf6N2E2_6008	0.73	-1.2
6,825,678	-		Pf6N2E2_6008	0.73	-0.9
6,825,679	+		Pf6N2E2_6008	0.73	+0.8
6,825,679	+		Pf6N2E2_6008	0.73	-0.9
6,825,679	+		Pf6N2E2_6008	0.73	-0.2
6,825,679	+		Pf6N2E2_6008	0.73	-2.7
6,825,679	+		Pf6N2E2_6008	0.73	-0.2
6,825,679	+				-2.5
6,825,687	-		Pf6N2E2_6008	0.74	+0.5
6,825,687	-		Pf6N2E2_6008	0.74	-1.5
6,825,743	+		Pf6N2E2_6008	0.80	-0.3
6,825,768	-		Pf6N2E2_6008	0.83	+0.7
6,825,787	+		Pf6N2E2_6008	0.85	+1.7
6,825,787	+		Pf6N2E2_6008	0.85	-0.8
6,825,787	+		Pf6N2E2_6008	0.85	-0.9
6,825,855	+				-1.2
6,825,869	-				-2.2
6,825,869	-				-0.2
6,825,934	+				+0.2
6,825,934	+				+0.3
6,825,934	+				+0.6
6,825,935	-				-1.3
6,825,935	-				+1.7
6,825,935	-				-2.4
6,825,935	-				+0.8
6,825,935	-				-2.6
6,825,946	-				+1.1
6,825,955	+				-0.4
6,825,956	-				-0.8
6,825,956	-				-2.0
6,825,973	+				+0.8
6,825,974	-				+0.8
6,825,980	+				-1.1
6,825,980	+				-1.3
6,825,981	-				+1.7
6,825,986	-				-0.5
6,826,013	-				+0.2
6,826,023	-				-1.0
6,826,146	+				-1.6
6,826,147	-				+1.3
6,826,147	-				+1.5
6,826,148	+				-1.9
6,826,148	+				-0.3
6,826,149	-				+0.3
6,826,149	-				+0.6
6,826,149	-				-2.2
6,826,186	+				-2.2
6,826,186	+				-0.9
6,826,187	-				-0.7
6,826,187	-				-1.0
6,826,249	+				-0.1
6,826,249	+				-0.3
6,826,313	+		Pf6N2E2_6009	0.37	-0.6
6,826,313	+		Pf6N2E2_6009	0.37	+1.7
6,826,313	+		Pf6N2E2_6009	0.37	+0.1
6,826,313	+		Pf6N2E2_6009	0.37	+1.7
6,826,314	-		Pf6N2E2_6009	0.37	-1.4
6,826,314	-		Pf6N2E2_6009	0.37	-0.9
6,826,314	-		Pf6N2E2_6009	0.37	+1.7
6,826,326	+		Pf6N2E2_6009	0.43	-0.2
6,826,326	+		Pf6N2E2_6009	0.43	-0.4
6,826,327	-		Pf6N2E2_6009	0.43	-0.8
6,826,327	-		Pf6N2E2_6009	0.43	-1.1
6,826,327	-		Pf6N2E2_6009	0.43	-0.6
6,826,329	+		Pf6N2E2_6009	0.44	-0.2
6,826,329	+		Pf6N2E2_6009	0.44	+1.7
6,826,329	+		Pf6N2E2_6009	0.44	+1.7
6,826,329	+		Pf6N2E2_6009	0.44	-0.0
6,826,329	+		Pf6N2E2_6009	0.44	+1.7
6,826,330	-		Pf6N2E2_6009	0.45	-0.7
6,826,330	-		Pf6N2E2_6009	0.45	+1.0
6,826,330	-		Pf6N2E2_6009	0.45	+0.5
6,826,330	-		Pf6N2E2_6009	0.45	+1.7
6,826,330	-		Pf6N2E2_6009	0.45	+1.7
6,826,330	-		Pf6N2E2_6009	0.45	+1.7
6,826,332	+		Pf6N2E2_6009	0.46	+1.9
6,826,332	+		Pf6N2E2_6009	0.46	+1.3
6,826,333	-		Pf6N2E2_6009	0.46	-0.6
6,826,365	+		Pf6N2E2_6009	0.61	-0.2
6,826,365	+		Pf6N2E2_6009	0.61	-0.9
6,826,365	+		Pf6N2E2_6009	0.61	-1.2
6,826,366	-		Pf6N2E2_6009	0.62	-0.4
6,826,366	-		Pf6N2E2_6009	0.62	+0.1
6,826,366	-		Pf6N2E2_6009	0.62	-0.6
6,826,366	-		Pf6N2E2_6009	0.62	+0.8
6,826,369	+		Pf6N2E2_6009	0.63	+0.7
6,826,463	+				-0.6
6,826,499	+				+0.5
6,826,499	+				+0.1
6,826,500	-				-0.4
6,826,556	+				-1.2
6,826,557	-				-1.2
6,826,644	-		Pf6N2E2_6010	0.11	+0.1
6,826,706	+		Pf6N2E2_6010	0.17	+1.4
6,826,750	+		Pf6N2E2_6010	0.22	+0.7
6,826,751	-		Pf6N2E2_6010	0.22	+2.0
6,826,816	+		Pf6N2E2_6010	0.28	-0.6
6,826,817	-		Pf6N2E2_6010	0.29	+0.3
6,826,817	-		Pf6N2E2_6010	0.29	-0.4
6,826,845	+		Pf6N2E2_6010	0.31	-2.3
6,826,845	+		Pf6N2E2_6010	0.31	-1.1
6,826,845	+		Pf6N2E2_6010	0.31	-0.4
6,826,846	-		Pf6N2E2_6010	0.31	-0.6
6,827,016	+		Pf6N2E2_6010	0.49	+0.7
6,827,016	+		Pf6N2E2_6010	0.49	+1.3
6,827,016	+		Pf6N2E2_6010	0.49	-0.5
6,827,017	-		Pf6N2E2_6010	0.49	-0.3
6,827,017	-		Pf6N2E2_6010	0.49	-0.5
6,827,035	+		Pf6N2E2_6010	0.51	+0.3
6,827,035	+		Pf6N2E2_6010	0.51	+0.3
6,827,060	+		Pf6N2E2_6010	0.53	-1.8
6,827,086	+		Pf6N2E2_6010	0.56	-0.2
6,827,086	+		Pf6N2E2_6010	0.56	+0.7
6,827,087	-		Pf6N2E2_6010	0.56	+0.3
6,827,087	-		Pf6N2E2_6010	0.56	+0.6
6,827,134	+		Pf6N2E2_6010	0.61	-0.0
6,827,186	+		Pf6N2E2_6010	0.66	+0.3
6,827,186	+		Pf6N2E2_6010	0.66	+0.4
6,827,186	+		Pf6N2E2_6010	0.66	+1.0
6,827,186	+		Pf6N2E2_6010	0.66	-0.6
6,827,187	-		Pf6N2E2_6010	0.66	-1.3
6,827,187	-		Pf6N2E2_6010	0.66	-1.4
6,827,187	-		Pf6N2E2_6010	0.66	-0.1
6,827,187	-		Pf6N2E2_6010	0.66	+0.1
6,827,187	-		Pf6N2E2_6010	0.66	+1.6
6,827,187	-		Pf6N2E2_6010	0.66	+0.7
6,827,187	-		Pf6N2E2_6010	0.66	+0.1
6,827,187	-		Pf6N2E2_6010	0.66	+0.6
6,827,187	-		Pf6N2E2_6010	0.66	-1.2
6,827,288	+		Pf6N2E2_6010	0.77	-0.4
6,827,288	+		Pf6N2E2_6010	0.77	+0.1
6,827,297	+		Pf6N2E2_6010	0.77	-0.6
6,827,297	+		Pf6N2E2_6010	0.77	+0.1
6,827,297	+		Pf6N2E2_6010	0.77	-1.0
6,827,297	+		Pf6N2E2_6010	0.77	+0.6
6,827,298	-		Pf6N2E2_6010	0.78	-0.5
6,827,298	-		Pf6N2E2_6010	0.78	+1.1
6,827,298	-		Pf6N2E2_6010	0.78	-1.0
6,827,298	-		Pf6N2E2_6010	0.78	-0.5
6,827,339	+		Pf6N2E2_6010	0.82	+0.4
6,827,371	+		Pf6N2E2_6010	0.85	+0.3
6,827,372	-		Pf6N2E2_6010	0.85	+0.0
6,827,372	-		Pf6N2E2_6010	0.85	-0.6
6,827,372	-				+0.7
6,827,459	+				+1.7
6,827,477	+				+0.7
6,827,543	+				-0.1
6,827,544	-				+0.5
6,827,544	-				-0.8
6,827,547	+				+1.7
6,827,548	-				+0.3
6,827,548	-				-1.0
6,827,548	-				+0.7
6,827,556	-				-0.7
6,827,556	-				+0.2
6,827,556	-				+0.0
6,827,556	-				-0.3
6,827,556	-				-2.3
6,827,658	-				+1.0
6,827,658	-				-2.5
6,827,658	-				+0.9
6,827,740	+				+0.1
6,827,792	+				+0.6
6,827,831	+				-0.6
6,828,091	+		Pf6N2E2_6011	0.18	-0.9
6,828,091	+		Pf6N2E2_6011	0.18	+0.2
6,828,091	+		Pf6N2E2_6011	0.18	-0.6
6,828,095	-		Pf6N2E2_6011	0.18	+0.7
6,828,095	-		Pf6N2E2_6011	0.18	-0.3
6,828,095	-		Pf6N2E2_6011	0.18	-0.6
6,828,095	-		Pf6N2E2_6011	0.18	-1.1
6,828,095	-		Pf6N2E2_6011	0.18	-0.6
6,828,181	-		Pf6N2E2_6011	0.24	-0.8
6,828,258	-		Pf6N2E2_6011	0.30	-2.1
6,828,382	+		Pf6N2E2_6011	0.39	+1.1