Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_6008

Experiment: nitrogen source nitrite 5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrite 5mM
6,824,055	-				+0.5
6,824,165	+				-1.5
6,824,170	-				-0.3
6,824,193	-				+1.7
6,824,199	+				-1.1
6,824,232	+				-0.4
6,824,446	+		Pf6N2E2_6007	0.27	-0.0
6,824,446	+		Pf6N2E2_6007	0.27	-0.3
6,824,446	+		Pf6N2E2_6007	0.27	+0.6
6,824,446	+		Pf6N2E2_6007	0.27	+0.6
6,824,447	-		Pf6N2E2_6007	0.27	-0.9
6,824,447	-		Pf6N2E2_6007	0.27	+1.7
6,824,644	-		Pf6N2E2_6007	0.63	+1.7
6,824,783	-		Pf6N2E2_6007	0.88	+0.4
6,824,871	+				-1.5
6,825,030	+				-0.3
6,825,030	+				+1.7
6,825,031	-				+0.7
6,825,223	+		Pf6N2E2_6008	0.23	+1.7
6,825,223	+		Pf6N2E2_6008	0.23	-1.9
6,825,223	+		Pf6N2E2_6008	0.23	-0.6
6,825,223	+		Pf6N2E2_6008	0.23	-0.9
6,825,260	+		Pf6N2E2_6008	0.27	+0.1
6,825,260	+		Pf6N2E2_6008	0.27	+1.7
6,825,261	-		Pf6N2E2_6008	0.27	+1.0
6,825,261	-		Pf6N2E2_6008	0.27	-0.5
6,825,283	+		Pf6N2E2_6008	0.29	-0.9
6,825,283	+		Pf6N2E2_6008	0.29	-2.9
6,825,283	+		Pf6N2E2_6008	0.29	+0.3
6,825,283	+		Pf6N2E2_6008	0.29	+1.7
6,825,283	+		Pf6N2E2_6008	0.29	+0.0
6,825,283	+		Pf6N2E2_6008	0.29	+0.1
6,825,284	-		Pf6N2E2_6008	0.29	+0.2
6,825,284	-		Pf6N2E2_6008	0.29	+0.3
6,825,284	-		Pf6N2E2_6008	0.29	-1.1
6,825,284	-		Pf6N2E2_6008	0.29	-1.3
6,825,284	-		Pf6N2E2_6008	0.29	-2.0
6,825,284	-		Pf6N2E2_6008	0.29	-2.7
6,825,284	-		Pf6N2E2_6008	0.29	-0.5
6,825,284	-		Pf6N2E2_6008	0.29	+1.7
6,825,284	-		Pf6N2E2_6008	0.29	-0.0
6,825,284	-		Pf6N2E2_6008	0.29	+0.4
6,825,284	-		Pf6N2E2_6008	0.29	-1.0
6,825,284	-		Pf6N2E2_6008	0.29	+1.7
6,825,284	-		Pf6N2E2_6008	0.29	+1.1
6,825,285	+		Pf6N2E2_6008	0.29	-3.3
6,825,355	+		Pf6N2E2_6008	0.37	+0.3
6,825,355	+		Pf6N2E2_6008	0.37	+1.2
6,825,355	+		Pf6N2E2_6008	0.37	-1.7
6,825,355	+		Pf6N2E2_6008	0.37	-1.1
6,825,355	+		Pf6N2E2_6008	0.37	-0.9
6,825,356	-		Pf6N2E2_6008	0.37	+0.4
6,825,356	-		Pf6N2E2_6008	0.37	+1.7
6,825,356	-		Pf6N2E2_6008	0.37	-0.6
6,825,359	+		Pf6N2E2_6008	0.38	+0.5
6,825,359	+		Pf6N2E2_6008	0.38	+0.7
6,825,360	-		Pf6N2E2_6008	0.38	+0.7
6,825,360	-		Pf6N2E2_6008	0.38	+1.7
6,825,360	-		Pf6N2E2_6008	0.38	+1.7
6,825,382	+		Pf6N2E2_6008	0.40	+0.1
6,825,383	-		Pf6N2E2_6008	0.40	-1.1
6,825,421	+		Pf6N2E2_6008	0.44	-0.1
6,825,421	+		Pf6N2E2_6008	0.44	+0.5
6,825,421	+		Pf6N2E2_6008	0.44	+0.7
6,825,421	+		Pf6N2E2_6008	0.44	+1.4
6,825,421	+		Pf6N2E2_6008	0.44	-1.9
6,825,421	+		Pf6N2E2_6008	0.44	-0.6
6,825,422	-		Pf6N2E2_6008	0.44	-0.7
6,825,422	-		Pf6N2E2_6008	0.44	-1.1
6,825,461	+		Pf6N2E2_6008	0.49	-0.0
6,825,475	+		Pf6N2E2_6008	0.50	-0.2
6,825,475	+		Pf6N2E2_6008	0.50	-0.4
6,825,476	-		Pf6N2E2_6008	0.50	-0.9
6,825,476	-		Pf6N2E2_6008	0.50	+0.4
6,825,499	+		Pf6N2E2_6008	0.53	+0.6
6,825,500	-		Pf6N2E2_6008	0.53	+0.1
6,825,514	+		Pf6N2E2_6008	0.55	-1.1
6,825,613	+		Pf6N2E2_6008	0.66	-1.8
6,825,613	+		Pf6N2E2_6008	0.66	-2.2
6,825,613	+		Pf6N2E2_6008	0.66	-0.8
6,825,613	+		Pf6N2E2_6008	0.66	+1.0
6,825,614	-		Pf6N2E2_6008	0.66	-3.2
6,825,677	+		Pf6N2E2_6008	0.73	-0.0
6,825,677	+		Pf6N2E2_6008	0.73	+0.6
6,825,677	+		Pf6N2E2_6008	0.73	-1.1
6,825,677	+		Pf6N2E2_6008	0.73	-0.0
6,825,677	+		Pf6N2E2_6008	0.73	-0.6
6,825,678	-		Pf6N2E2_6008	0.73	+0.1
6,825,678	-		Pf6N2E2_6008	0.73	-1.0
6,825,678	-		Pf6N2E2_6008	0.73	-0.2
6,825,679	+		Pf6N2E2_6008	0.73	-0.2
6,825,679	+		Pf6N2E2_6008	0.73	+0.4
6,825,679	+		Pf6N2E2_6008	0.73	+0.7
6,825,679	+		Pf6N2E2_6008	0.73	-0.7
6,825,679	+		Pf6N2E2_6008	0.73	+0.1
6,825,679	+				-0.5
6,825,687	-		Pf6N2E2_6008	0.74	+0.6
6,825,687	-		Pf6N2E2_6008	0.74	-0.2
6,825,743	+		Pf6N2E2_6008	0.80	-0.5
6,825,768	-		Pf6N2E2_6008	0.83	+0.7
6,825,787	+		Pf6N2E2_6008	0.85	+1.7
6,825,787	+		Pf6N2E2_6008	0.85	+0.2
6,825,787	+		Pf6N2E2_6008	0.85	-0.9
6,825,855	+				+0.6
6,825,869	-				+1.0
6,825,869	-				-1.0
6,825,934	+				-0.7
6,825,934	+				+0.2
6,825,934	+				-0.1
6,825,935	-				-1.3
6,825,935	-				+1.7
6,825,935	-				-1.4
6,825,935	-				-1.2
6,825,935	-				-1.0
6,825,946	-				+0.1
6,825,955	+				+0.2
6,825,956	-				+0.3
6,825,956	-				-0.3
6,825,973	+				+0.1
6,825,974	-				+1.2
6,825,980	+				-0.7
6,825,980	+				-0.6
6,825,981	-				+1.7
6,825,986	-				+0.2
6,826,013	-				-0.6
6,826,023	-				-0.6
6,826,146	+				+0.3
6,826,147	-				+0.6
6,826,147	-				+0.8
6,826,148	+				-1.9
6,826,148	+				-0.3
6,826,149	-				-0.8
6,826,149	-				+0.1
6,826,149	-				-1.0
6,826,186	+				+0.2
6,826,186	+				-0.3
6,826,187	-				+0.9
6,826,187	-				-1.2
6,826,249	+				+0.2
6,826,249	+				-0.6
6,826,313	+		Pf6N2E2_6009	0.37	-0.6
6,826,313	+		Pf6N2E2_6009	0.37	+1.7
6,826,313	+		Pf6N2E2_6009	0.37	+0.1
6,826,313	+		Pf6N2E2_6009	0.37	+1.7
6,826,314	-		Pf6N2E2_6009	0.37	-1.4
6,826,314	-		Pf6N2E2_6009	0.37	+1.4
6,826,314	-		Pf6N2E2_6009	0.37	+1.7
6,826,326	+		Pf6N2E2_6009	0.43	-0.9
6,826,326	+		Pf6N2E2_6009	0.43	-0.4
6,826,327	-		Pf6N2E2_6009	0.43	-1.8
6,826,327	-		Pf6N2E2_6009	0.43	+0.3
6,826,327	-		Pf6N2E2_6009	0.43	+0.6
6,826,329	+		Pf6N2E2_6009	0.44	-0.2
6,826,329	+		Pf6N2E2_6009	0.44	+3.3
6,826,329	+		Pf6N2E2_6009	0.44	+1.7
6,826,329	+		Pf6N2E2_6009	0.44	-0.4
6,826,329	+		Pf6N2E2_6009	0.44	+1.7
6,826,330	-		Pf6N2E2_6009	0.45	-1.1
6,826,330	-		Pf6N2E2_6009	0.45	-0.3
6,826,330	-		Pf6N2E2_6009	0.45	-0.5
6,826,330	-		Pf6N2E2_6009	0.45	+1.7
6,826,330	-		Pf6N2E2_6009	0.45	+1.7
6,826,330	-		Pf6N2E2_6009	0.45	+1.7
6,826,332	+		Pf6N2E2_6009	0.46	+1.9
6,826,332	+		Pf6N2E2_6009	0.46	+0.4
6,826,333	-		Pf6N2E2_6009	0.46	-0.6
6,826,365	+		Pf6N2E2_6009	0.61	+0.3
6,826,365	+		Pf6N2E2_6009	0.61	-0.0
6,826,365	+		Pf6N2E2_6009	0.61	-0.2
6,826,366	-		Pf6N2E2_6009	0.62	+0.4
6,826,366	-		Pf6N2E2_6009	0.62	+0.1
6,826,366	-		Pf6N2E2_6009	0.62	-0.6
6,826,366	-		Pf6N2E2_6009	0.62	-1.1
6,826,369	+		Pf6N2E2_6009	0.63	+0.7
6,826,463	+				+0.2
6,826,499	+				-0.3
6,826,499	+				+0.1
6,826,500	-				-0.2
6,826,556	+				-1.0
6,826,557	-				+0.6
6,826,644	-		Pf6N2E2_6010	0.11	+2.9
6,826,706	+		Pf6N2E2_6010	0.17	-0.2
6,826,750	+		Pf6N2E2_6010	0.22	+1.1
6,826,751	-		Pf6N2E2_6010	0.22	+1.3
6,826,816	+		Pf6N2E2_6010	0.28	-0.0
6,826,817	-		Pf6N2E2_6010	0.29	-0.1
6,826,817	-		Pf6N2E2_6010	0.29	-2.7
6,826,845	+		Pf6N2E2_6010	0.31	-0.7
6,826,845	+		Pf6N2E2_6010	0.31	-1.1
6,826,845	+		Pf6N2E2_6010	0.31	+0.8
6,826,846	-		Pf6N2E2_6010	0.31	-3.4