Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5205

Experiment: nitrogen source nitrite 5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrite 5mM
6,004,491	-		Pf6N2E2_5204	0.36	+0.0
6,004,623	+		Pf6N2E2_5204	0.58	+0.2
6,004,623	+		Pf6N2E2_5204	0.58	+0.8
6,004,623	+		Pf6N2E2_5204	0.58	-0.9
6,004,623	+		Pf6N2E2_5204	0.58	-0.5
6,004,623	+		Pf6N2E2_5204	0.58	-0.5
6,004,623	+		Pf6N2E2_5204	0.58	+1.2
6,004,623	+		Pf6N2E2_5204	0.58	+1.1
6,004,623	+		Pf6N2E2_5204	0.58	-0.5
6,004,623	+		Pf6N2E2_5204	0.58	-1.6
6,004,623	+		Pf6N2E2_5204	0.58	-0.7
6,004,623	+		Pf6N2E2_5204	0.58	+0.2
6,004,624	-		Pf6N2E2_5204	0.58	-0.1
6,004,624	-		Pf6N2E2_5204	0.58	+0.8
6,004,624	-		Pf6N2E2_5204	0.58	+0.8
6,004,624	-		Pf6N2E2_5204	0.58	+0.8
6,004,624	-		Pf6N2E2_5204	0.58	+0.2
6,004,624	-		Pf6N2E2_5204	0.58	+0.3
6,004,626	-		Pf6N2E2_5204	0.59	-0.1
6,004,848	+				+1.2
6,004,848	+				-0.7
6,004,848	+				+1.8
6,004,848	+				+0.2
6,004,848	+				-0.6
6,004,848	+				-0.0
6,004,849	-				+1.8
6,004,849	-				-2.8
6,004,849	-				+0.6
6,004,849	-				-2.4
6,004,857	+				-0.7
6,004,857	+				-0.3
6,004,858	-				-0.2
6,004,858	-				+0.2
6,004,861	+				+0.5
6,004,861	+				+0.8
6,004,861	+				+0.5
6,004,861	+				+2.5
6,004,861	+				+0.7
6,004,861	+				+0.5
6,004,861	+				+0.1
6,004,861	+				+0.8
6,004,861	+				+0.3
6,004,861	+				-0.3
6,004,861	+				+0.8
6,004,862	-				-0.2
6,004,862	-				-0.3
6,004,862	-				+1.8
6,004,862	-				-0.6
6,004,862	-				+0.8
6,004,866	+				+0.9
6,004,903	+				-0.4
6,004,903	+				+0.5
6,004,948	+				-0.1
6,004,974	-				-0.0
6,004,982	+				+0.8
6,004,983	-				+0.5
6,005,001	-				+0.4
6,005,010	-				-2.0
6,005,065	+				+0.7
6,005,066	-				-0.6
6,005,069	+				+0.2
6,005,069	+				+0.7
6,005,069	+				+0.2
6,005,070	-				+1.8
6,005,070	-				+0.1
6,005,070	-				-0.8
6,005,070	-				-0.7
6,005,127	+				-0.7
6,005,127	+				+0.2
6,005,127	+				+0.8
6,005,143	-				+0.2
6,005,154	+				-3.3
6,005,154	+				-0.6
6,005,155	-				-1.6
6,005,155	-				-0.5
6,005,155	-				+1.8
6,005,155	-				+1.5
6,005,155	-				-0.6
6,005,213	+				+0.2
6,005,214	-				+1.8
6,005,216	+				-0.2
6,005,216	+				+0.8
6,005,216	+				-3.1
6,005,295	+				+0.9
6,005,320	+				-3.9
6,005,320	+				-0.9
6,005,320	+				-0.2
6,005,320	+				-0.4
6,005,320	+				-1.7
6,005,320	+				-1.5
6,005,320	+				-1.5
6,005,320	+				+0.2
6,005,320	+				+0.0
6,005,321	-				+0.8
6,005,322	+				-0.6
6,005,322	+				+0.6
6,005,322	+				+0.8
6,005,322	+				-0.5
6,005,322	+				+0.1
6,005,322	+				-0.1
6,005,323	-				-0.8
6,005,323	-				-1.4
6,005,443	+				-0.8
6,005,446	+				+0.8
6,005,446	+				+0.2
6,005,485	+				+1.0
6,005,577	+				-1.1
6,005,578	-				-0.5
6,005,578	-				+0.5
6,005,578	-				-0.8
6,005,578	-				-2.5
6,005,623	+		Pf6N2E2_5205	0.15	+0.8
6,005,629	+		Pf6N2E2_5205	0.16	-3.2
6,005,629	+		Pf6N2E2_5205	0.16	-0.7
6,005,629	+		Pf6N2E2_5205	0.16	-0.4
6,005,629	+		Pf6N2E2_5205	0.16	+0.2
6,005,629	+		Pf6N2E2_5205	0.16	+1.0
6,005,629	+		Pf6N2E2_5205	0.16	-0.1
6,005,630	-		Pf6N2E2_5205	0.16	-0.2
6,005,630	-		Pf6N2E2_5205	0.16	-0.4
6,005,630	-		Pf6N2E2_5205	0.16	-0.1
6,005,630	-		Pf6N2E2_5205	0.16	+0.8
6,005,630	-		Pf6N2E2_5205	0.16	+0.1
6,005,710	+		Pf6N2E2_5205	0.25	+0.8
6,005,710	+		Pf6N2E2_5205	0.25	-2.2
6,005,710	+		Pf6N2E2_5205	0.25	-0.9
6,005,710	+		Pf6N2E2_5205	0.25	+0.8
6,005,710	+		Pf6N2E2_5205	0.25	-0.8
6,005,711	-		Pf6N2E2_5205	0.25	-0.5
6,005,729	+		Pf6N2E2_5205	0.27	-0.7
6,005,729	+		Pf6N2E2_5205	0.27	-0.6
6,005,870	+		Pf6N2E2_5205	0.43	-0.8
6,005,870	+		Pf6N2E2_5205	0.43	-1.1
6,005,920	-		Pf6N2E2_5205	0.48	-1.0
6,005,983	+		Pf6N2E2_5205	0.55	+0.7
6,005,984	-		Pf6N2E2_5205	0.56	-0.5
6,005,984	-		Pf6N2E2_5205	0.56	-1.4
6,006,095	+		Pf6N2E2_5205	0.68	+0.9
6,006,095	+		Pf6N2E2_5205	0.68	-1.8
6,006,096	-		Pf6N2E2_5205	0.68	+1.3
6,006,096	-		Pf6N2E2_5205	0.68	-0.4
6,006,113	+		Pf6N2E2_5205	0.70	+0.8
6,006,114	-		Pf6N2E2_5205	0.70	-0.5
6,006,174	+		Pf6N2E2_5205	0.77	-0.3
6,006,175	-		Pf6N2E2_5205	0.77	-0.3
6,006,459	-				-0.1
6,006,589	+				+0.5
6,006,589	+				-0.2
6,006,589	+				-0.7
6,006,589	+				-0.5
6,006,589	+				-0.2
6,006,590	-				-1.7
6,006,593	+				-1.0
6,006,593	+				+0.6
6,006,593	+				+0.1
6,006,593	+				-0.3
6,006,593	+				+1.0
6,006,594	-				-0.3
6,006,594	-				+0.2
6,006,594	-				+1.8
6,006,594	-				+1.3
6,006,594	-				+0.9
6,006,617	+				+0.2
6,006,617	+				+0.4
6,006,617	+				+0.8
6,006,617	+				-1.2
6,006,617	+				-0.2
6,006,617	+				-0.1
6,006,617	+				-1.5
6,006,617	+				+0.3
6,006,618	-				+1.5
6,006,618	-				-1.9
6,006,618	-				-0.7
6,006,618	-				+0.8
6,006,618	-				+0.2
6,006,618	-				+1.8
6,006,618	-				+0.2
6,006,618	-				-1.2
6,006,618	-				-0.4
6,006,618	-				+0.9
6,006,618	-				-0.4
6,006,619	+				-0.3
6,006,619	+				-0.2
6,006,619	+				-0.5
6,006,620	-				-1.8
6,006,620	-				+1.1
6,006,620	-				+1.2
6,006,736	+		Pf6N2E2_5206	0.16	-0.7
6,006,736	+		Pf6N2E2_5206	0.16	-0.1
6,006,737	-		Pf6N2E2_5206	0.16	+1.5
6,006,776	-		Pf6N2E2_5206	0.21	-0.1
6,006,795	+		Pf6N2E2_5206	0.24	+0.4
6,006,795	+		Pf6N2E2_5206	0.24	+1.1
6,006,795	+		Pf6N2E2_5206	0.24	-1.7
6,006,795	+		Pf6N2E2_5206	0.24	-1.1
6,006,795	+		Pf6N2E2_5206	0.24	-0.3
6,006,795	+		Pf6N2E2_5206	0.24	-1.3
6,006,796	-		Pf6N2E2_5206	0.24	-0.2
6,006,796	-		Pf6N2E2_5206	0.24	-0.1
6,006,796	-		Pf6N2E2_5206	0.24	+0.2
6,006,796	-		Pf6N2E2_5206	0.24	+0.2
6,006,796	-		Pf6N2E2_5206	0.24	-0.3
6,006,923	+		Pf6N2E2_5206	0.41	+0.6
6,006,923	+		Pf6N2E2_5206	0.41	+0.4
6,006,923	+		Pf6N2E2_5206	0.41	+0.3
6,006,923	+		Pf6N2E2_5206	0.41	+0.1
6,006,924	-		Pf6N2E2_5206	0.41	+0.2
6,006,924	-		Pf6N2E2_5206	0.41	+0.8
6,006,924	-		Pf6N2E2_5206	0.41	+0.4
6,006,934	+		Pf6N2E2_5206	0.42	+1.0
6,006,934	+		Pf6N2E2_5206	0.42	-0.4
6,006,934	+		Pf6N2E2_5206	0.42	-1.3
6,006,934	+		Pf6N2E2_5206	0.42	+0.8
6,006,934	+		Pf6N2E2_5206	0.42	+0.0
6,006,934	+		Pf6N2E2_5206	0.42	-0.7
6,006,935	-		Pf6N2E2_5206	0.42	+0.6
6,006,935	-		Pf6N2E2_5206	0.42	+0.2
6,006,935	-		Pf6N2E2_5206	0.42	+1.8
6,006,970	-		Pf6N2E2_5206	0.47	-0.1
6,006,970	-		Pf6N2E2_5206	0.47	+2.3
6,006,970	-		Pf6N2E2_5206	0.47	-0.1
6,007,006	+		Pf6N2E2_5206	0.52	+1.8
6,007,007	-		Pf6N2E2_5206	0.52	-0.2
6,007,206	-		Pf6N2E2_5206	0.79	+0.2
6,007,214	+		Pf6N2E2_5206	0.80	-0.9
6,007,214	+		Pf6N2E2_5206	0.80	+1.2
6,007,214	+		Pf6N2E2_5206	0.80	-2.2
6,007,214	+		Pf6N2E2_5206	0.80	-0.6
6,007,214	+		Pf6N2E2_5206	0.80	+0.3
6,007,215	-		Pf6N2E2_5206	0.80	-1.5
6,007,313	+				+1.8
6,007,313	+				+0.2
6,007,313	+				-0.8
6,007,313	+				-0.9
6,007,314	-				+0.1
6,007,314	-				-0.1
6,007,314	-				-2.7
6,007,314	-				-0.0
6,007,314	-				+0.3
6,007,332	+				-0.1
6,007,333	-				-0.6
6,007,333	-				-0.2