Experiment: nitrogen source nitrate 5mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_714 and Pf6N2E2_715 are separated by 25 nucleotides Pf6N2E2_715 and Pf6N2E2_716 are separated by 73 nucleotides Pf6N2E2_716 and Pf6N2E2_717 are separated by 160 nucleotides
Pf6N2E2_714 - NnrS protein involved in response to NO, at 818,156 to 819,346
_714
Pf6N2E2_715 - putative membrane protein, at 819,372 to 819,809
_715
Pf6N2E2_716 - Nitric oxide-dependent regulator DnrN or NorA, at 819,883 to 820,557
_716
Pf6N2E2_717 - Functional role page for Anaerobic nitric oxide reductase transcription regulator NorR, at 820,718 to 822,250
_717
Position (kb) 819
820 Strain fitness (log2 ratio) -2
-1
0
1
2 at 818.588 kb on + strand, within Pf6N2E2_714 at 818.604 kb on + strand, within Pf6N2E2_714 at 818.604 kb on + strand, within Pf6N2E2_714 at 818.605 kb on - strand, within Pf6N2E2_714 at 818.640 kb on + strand, within Pf6N2E2_714 at 818.846 kb on + strand, within Pf6N2E2_714 at 818.846 kb on + strand, within Pf6N2E2_714 at 818.846 kb on + strand, within Pf6N2E2_714 at 818.846 kb on + strand, within Pf6N2E2_714 at 818.847 kb on - strand, within Pf6N2E2_714 at 818.990 kb on + strand, within Pf6N2E2_714 at 819.285 kb on + strand at 819.286 kb on - strand at 819.287 kb on + strand at 819.287 kb on + strand at 819.287 kb on + strand at 819.288 kb on - strand at 819.376 kb on - strand at 819.676 kb on - strand, within Pf6N2E2_715 at 819.676 kb on - strand, within Pf6N2E2_715 at 819.676 kb on - strand, within Pf6N2E2_715 at 819.676 kb on - strand, within Pf6N2E2_715 at 819.690 kb on + strand, within Pf6N2E2_715 at 819.690 kb on + strand, within Pf6N2E2_715 at 819.690 kb on + strand, within Pf6N2E2_715 at 819.691 kb on - strand, within Pf6N2E2_715 at 819.795 kb on + strand at 819.795 kb on + strand at 819.795 kb on + strand at 819.796 kb on - strand at 819.864 kb on - strand at 819.978 kb on - strand, within Pf6N2E2_716 at 820.181 kb on + strand, within Pf6N2E2_716 at 820.181 kb on + strand, within Pf6N2E2_716 at 820.181 kb on + strand, within Pf6N2E2_716 at 820.181 kb on + strand, within Pf6N2E2_716 at 820.182 kb on - strand, within Pf6N2E2_716 at 820.182 kb on - strand, within Pf6N2E2_716 at 820.182 kb on - strand, within Pf6N2E2_716 at 820.182 kb on - strand, within Pf6N2E2_716 at 820.478 kb on + strand, within Pf6N2E2_716 at 820.478 kb on + strand, within Pf6N2E2_716 at 820.478 kb on + strand, within Pf6N2E2_716 at 820.478 kb on + strand, within Pf6N2E2_716 at 820.478 kb on + strand, within Pf6N2E2_716 at 820.479 kb on - strand, within Pf6N2E2_716 at 820.479 kb on - strand, within Pf6N2E2_716 at 820.479 kb on - strand, within Pf6N2E2_716 at 820.491 kb on + strand at 820.491 kb on + strand at 820.714 kb on + strand at 820.714 kb on + strand at 820.805 kb on + strand at 820.806 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction nitrogen source nitrate 5mM remove 818,588 + Pf6N2E2_714 0.36 +1.7 818,604 + Pf6N2E2_714 0.38 -0.6 818,604 + Pf6N2E2_714 0.38 -0.3 818,605 - Pf6N2E2_714 0.38 +0.3 818,640 + Pf6N2E2_714 0.41 +0.8 818,846 + Pf6N2E2_714 0.58 +0.4 818,846 + Pf6N2E2_714 0.58 -0.3 818,846 + Pf6N2E2_714 0.58 -0.3 818,846 + Pf6N2E2_714 0.58 +0.0 818,847 - Pf6N2E2_714 0.58 -0.9 818,990 + Pf6N2E2_714 0.70 -1.5 819,285 + -0.2 819,286 - +0.3 819,287 + -1.5 819,287 + +0.1 819,287 + -0.1 819,288 - -0.1 819,376 - -0.7 819,676 - Pf6N2E2_715 0.69 +1.6 819,676 - Pf6N2E2_715 0.69 -0.7 819,676 - Pf6N2E2_715 0.69 +1.4 819,676 - Pf6N2E2_715 0.69 +0.7 819,690 + Pf6N2E2_715 0.73 +1.7 819,690 + Pf6N2E2_715 0.73 +2.1 819,690 + Pf6N2E2_715 0.73 +0.1 819,691 - Pf6N2E2_715 0.73 -1.3 819,795 + -0.1 819,795 + -0.5 819,795 + -1.3 819,796 - +1.7 819,864 - +0.0 819,978 - Pf6N2E2_716 0.14 -0.2 820,181 + Pf6N2E2_716 0.44 +0.1 820,181 + Pf6N2E2_716 0.44 +0.7 820,181 + Pf6N2E2_716 0.44 +0.3 820,181 + Pf6N2E2_716 0.44 -1.7 820,182 - Pf6N2E2_716 0.44 -1.2 820,182 - Pf6N2E2_716 0.44 +1.6 820,182 - Pf6N2E2_716 0.44 +0.4 820,182 - Pf6N2E2_716 0.44 -2.6 820,478 + Pf6N2E2_716 0.88 +1.7 820,478 + Pf6N2E2_716 0.88 +0.7 820,478 + Pf6N2E2_716 0.88 +0.5 820,478 + Pf6N2E2_716 0.88 -1.3 820,478 + Pf6N2E2_716 0.88 -0.3 820,479 - Pf6N2E2_716 0.88 -0.1 820,479 - Pf6N2E2_716 0.88 -1.5 820,479 - Pf6N2E2_716 0.88 +1.1 820,491 + -2.0 820,491 + -0.7 820,714 + -0.5 820,714 + -0.9 820,805 + -0.3 820,806 - +1.7
Or see this region's nucleotide sequence