Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4116

Experiment: nitrogen source nitrate 20mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrate 20mM
4,794,425	+		Pf6N2E2_4115	0.21	+1.3
4,794,425	+		Pf6N2E2_4115	0.21	-1.2
4,794,426	-		Pf6N2E2_4115	0.22	-0.2
4,794,581	+		Pf6N2E2_4115	0.41	+0.5
4,794,581	+		Pf6N2E2_4115	0.41	+0.7
4,794,581	+		Pf6N2E2_4115	0.41	-1.7
4,794,581	+		Pf6N2E2_4115	0.41	-0.4
4,794,581	+		Pf6N2E2_4115	0.41	+0.4
4,794,581	+		Pf6N2E2_4115	0.41	-1.0
4,794,581	+		Pf6N2E2_4115	0.41	-0.3
4,794,581	+		Pf6N2E2_4115	0.41	-0.0
4,794,582	-		Pf6N2E2_4115	0.41	+0.6
4,794,582	-		Pf6N2E2_4115	0.41	-1.1
4,794,582	-		Pf6N2E2_4115	0.41	+0.8
4,794,582	-		Pf6N2E2_4115	0.41	+0.7
4,794,582	-		Pf6N2E2_4115	0.41	-2.0
4,794,582	-		Pf6N2E2_4115	0.41	-3.0
4,794,582	-		Pf6N2E2_4115	0.41	+1.8
4,794,592	-		Pf6N2E2_4115	0.42	-0.1
4,794,707	+		Pf6N2E2_4115	0.56	-0.9
4,794,707	+		Pf6N2E2_4115	0.56	-1.0
4,794,707	+		Pf6N2E2_4115	0.56	-2.5
4,794,708	-		Pf6N2E2_4115	0.57	-1.6
4,794,708	-		Pf6N2E2_4115	0.57	-0.5
4,794,824	+		Pf6N2E2_4115	0.71	+0.4
4,794,824	+		Pf6N2E2_4115	0.71	+0.2
4,795,047	+				-0.8
4,795,081	-				-1.9
4,795,133	+				+0.8
4,795,133	+				+0.7
4,795,133	+				+0.8
4,795,133	+				+0.4
4,795,133	+				-2.5
4,795,133	+				-0.2
4,795,134	-				-0.6
4,795,134	-				+0.3
4,795,134	-				+0.4
4,795,134	-				+0.7
4,795,134	-				-1.4
4,795,134	-				+0.2
4,795,134	-				+0.4
4,795,134	-				-2.5
4,795,134	-				-3.3
4,795,199	+				+1.7
4,795,330	+		Pf6N2E2_4116	0.19	-0.3
4,795,331	-		Pf6N2E2_4116	0.19	-0.3
4,795,331	-		Pf6N2E2_4116	0.19	-0.7
4,795,331	-		Pf6N2E2_4116	0.19	-1.7
4,795,331	-		Pf6N2E2_4116	0.19	-0.1
4,795,374	+		Pf6N2E2_4116	0.26	-0.8
4,795,375	-		Pf6N2E2_4116	0.26	-0.1
4,795,375	-		Pf6N2E2_4116	0.26	+0.4
4,795,555	+		Pf6N2E2_4116	0.54	+0.8
4,795,561	+		Pf6N2E2_4116	0.55	-0.5
4,795,561	+		Pf6N2E2_4116	0.55	+0.1
4,795,561	+		Pf6N2E2_4116	0.55	-2.2
4,795,562	-		Pf6N2E2_4116	0.55	+0.3
4,795,562	-		Pf6N2E2_4116	0.55	-1.0
4,795,562	-		Pf6N2E2_4116	0.55	-0.2
4,795,562	-		Pf6N2E2_4116	0.55	+0.4
4,795,659	+		Pf6N2E2_4116	0.70	-1.1
4,795,868	+				-0.2
4,795,868	+				-0.5
4,795,869	-				+0.8
4,795,869	-				+0.8
4,795,933	+				-0.5
4,795,933	+				-1.0
4,795,933	+				-1.0
4,795,933	+				+0.2
4,795,933	+				+1.8
4,795,933	+				+0.8
4,795,933	+				-2.3
4,795,933	+				-0.2
4,795,933	+				-0.3
4,795,933	+				+0.8
4,795,933	+				-0.0
4,795,934	-				-0.8
4,795,934	-				+0.3
4,795,934	-				-0.1
4,795,934	-				+0.7
4,795,934	-				-0.8
4,795,934	-				-1.8
4,795,934	-				-0.2
4,795,934	-				-0.7
4,795,934	-				+0.2
4,795,934	-				-0.3
4,795,934	-				+0.5
4,795,934	-				-3.6
4,795,943	-				+0.5
4,795,943	-				-0.0
4,795,943	-				+0.8
4,795,943	-				+0.2
4,795,943	-				+1.8
4,795,962	+				-0.2
4,795,995	+				-0.6
4,795,996	-				+0.5
4,796,005	+				+0.2
4,796,006	-				+0.6
4,796,006	-				-0.8
4,796,006	-				-0.6
4,796,082	-				-1.0
4,796,082	-				+2.5
4,796,082	-				-0.5
4,796,094	+				-0.5
4,796,131	+				+1.5
4,796,131	+				-1.2
4,796,137	+				+0.5
4,796,177	+				-1.7
4,796,177	+				+0.2
4,796,177	+				-0.2
4,796,178	-				+1.8
4,796,178	-				+0.2
4,796,178	-				-0.0
4,796,178	-				+1.8
4,796,178	-				+0.2
4,796,179	+				+0.5
4,796,179	+				-1.9
4,796,179	+				+1.8
4,796,179	+				-0.2
4,796,180	-				+0.6
4,796,180	-				-1.6
4,796,180	-				-0.1
4,796,180	-				+0.4
4,796,190	+				+1.2
4,796,190	+				-0.6
4,796,244	+				+1.4
4,796,244	+				-0.9
4,796,244	+				-0.3
4,796,244	+				-3.3
4,796,244	+				-0.7
4,796,244	+				+0.2
4,796,244	+				-1.1
4,796,244	+				+1.4
4,796,245	-				-0.1
4,796,245	-				-3.0
4,796,245	-				+0.3
4,796,245	-				+1.0
4,796,245	-				-0.8
4,796,245	-				-0.7
4,796,245	-				+2.8
4,796,245	-				-0.2
4,796,245	-				-1.2
4,796,245	-				+1.0
4,796,245	-				-0.2
4,796,253	-				-1.2
4,796,268	+				-1.2
4,796,268	+				+0.6
4,796,268	+				-0.7
4,796,268	+				-0.3
4,796,268	+				-0.6
4,796,268	+				+0.7
4,796,268	+				-2.2
4,796,269	-				+1.8
4,796,269	-				+1.8
4,796,269	-				-0.2
4,796,269	-				-0.6
4,796,446	-		Pf6N2E2_4117	0.24	-1.6
4,796,457	+		Pf6N2E2_4117	0.26	-1.0
4,796,458	-		Pf6N2E2_4117	0.26	-3.3
4,796,481	-		Pf6N2E2_4117	0.29	-0.3
4,796,552	+		Pf6N2E2_4117	0.40	-2.0
4,796,561	+		Pf6N2E2_4117	0.41	+0.2
4,796,562	-		Pf6N2E2_4117	0.41	-0.4
4,796,627	+		Pf6N2E2_4117	0.50	+0.8
4,796,627	+		Pf6N2E2_4117	0.50	+0.3
4,796,627	+		Pf6N2E2_4117	0.50	-0.3
4,796,627	+		Pf6N2E2_4117	0.50	-0.4
4,796,627	+		Pf6N2E2_4117	0.50	+0.8
4,796,627	+		Pf6N2E2_4117	0.50	+0.8
4,796,628	-		Pf6N2E2_4117	0.50	+1.2
4,796,628	-		Pf6N2E2_4117	0.50	-0.5
4,796,628	-		Pf6N2E2_4117	0.50	-0.7
4,796,628	-		Pf6N2E2_4117	0.50	-1.4
4,796,628	-		Pf6N2E2_4117	0.50	-0.8
4,796,628	-		Pf6N2E2_4117	0.50	-1.4
4,796,628	-		Pf6N2E2_4117	0.50	+0.0
4,796,628	-		Pf6N2E2_4117	0.50	-2.7
4,796,752	+		Pf6N2E2_4117	0.68	+0.1
4,796,752	+		Pf6N2E2_4117	0.68	-2.1
4,796,752	+		Pf6N2E2_4117	0.68	-1.7
4,796,752	+		Pf6N2E2_4117	0.68	-0.4
4,796,753	-		Pf6N2E2_4117	0.68	-2.3
4,796,760	+		Pf6N2E2_4117	0.69	-1.5
4,796,760	+		Pf6N2E2_4117	0.69	-0.5
4,796,760	+		Pf6N2E2_4117	0.69	+0.2
4,796,760	+		Pf6N2E2_4117	0.69	-1.5
4,796,760	+		Pf6N2E2_4117	0.69	+0.6
4,796,761	-		Pf6N2E2_4117	0.70	+0.2
4,796,761	-		Pf6N2E2_4117	0.70	-0.6
4,796,761	-		Pf6N2E2_4117	0.70	+0.2
4,796,763	+		Pf6N2E2_4117	0.70	-0.9
4,796,763	+		Pf6N2E2_4117	0.70	-1.1
4,796,763	+		Pf6N2E2_4117	0.70	+0.1
4,796,764	-		Pf6N2E2_4117	0.70	+1.8
4,796,784	+		Pf6N2E2_4117	0.73	+0.8
4,796,784	+		Pf6N2E2_4117	0.73	-0.2
4,796,784	+		Pf6N2E2_4117	0.73	+0.3
4,796,785	-		Pf6N2E2_4117	0.73	-0.2
4,796,785	-		Pf6N2E2_4117	0.73	-0.1
4,796,785	-		Pf6N2E2_4117	0.73	+0.6
4,796,785	-		Pf6N2E2_4117	0.73	-2.7
4,796,785	-		Pf6N2E2_4117	0.73	-0.5