Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3935

Experiment: nitrogen source Ammonium chloride 20mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source Ammonium chloride 20mM
4,571,114	+				+0.9
4,571,115	-				+0.6
4,571,115	-				+0.0
4,571,115	-				+1.6
4,571,115	-				+1.6
4,571,126	+				+0.1
4,571,126	+				+0.4
4,571,126	+				+0.3
4,571,127	-				+1.6
4,571,127	-				+0.4
4,571,127	-				-1.4
4,571,143	+				+1.4
4,571,143	+				-0.8
4,571,143	+				+0.9
4,571,143	+				-0.2
4,571,143	+				-0.3
4,571,144	-				+1.6
4,571,187	-		Pf6N2E2_3934	0.12	+0.3
4,571,187	-		Pf6N2E2_3934	0.12	-0.8
4,571,315	+		Pf6N2E2_3934	0.31	-1.0
4,571,315	+		Pf6N2E2_3934	0.31	+0.1
4,571,316	-		Pf6N2E2_3934	0.31	-0.3
4,571,316	-		Pf6N2E2_3934	0.31	+0.3
4,571,379	+		Pf6N2E2_3934	0.41	-0.1
4,571,380	-		Pf6N2E2_3934	0.41	-0.2
4,571,380	-		Pf6N2E2_3934	0.41	+0.1
4,571,590	+		Pf6N2E2_3934	0.72	-1.8
4,571,591	-		Pf6N2E2_3934	0.73	+0.4
4,571,591	-		Pf6N2E2_3934	0.73	+0.8
4,571,593	+		Pf6N2E2_3934	0.73	-0.6
4,571,594	-		Pf6N2E2_3934	0.73	-0.7
4,571,594	-		Pf6N2E2_3934	0.73	+0.0
4,571,594	-		Pf6N2E2_3934	0.73	-0.4
4,571,594	-		Pf6N2E2_3934	0.73	+0.3
4,571,633	+		Pf6N2E2_3934	0.79	+0.6
4,571,633	+		Pf6N2E2_3934	0.79	+0.2
4,571,633	+		Pf6N2E2_3934	0.79	-0.3
4,571,633	+		Pf6N2E2_3934	0.79	+0.6
4,571,633	+		Pf6N2E2_3934	0.79	+0.5
4,571,634	-		Pf6N2E2_3934	0.79	-0.3
4,571,634	-		Pf6N2E2_3934	0.79	+1.2
4,571,634	-		Pf6N2E2_3934	0.79	+1.0
4,571,634	-		Pf6N2E2_3934	0.79	-1.6
4,571,634	-		Pf6N2E2_3934	0.79	+1.6
4,571,634	-		Pf6N2E2_3934	0.79	-0.4
4,571,634	-		Pf6N2E2_3934	0.79	-0.1
4,571,778	+				-1.0
4,571,910	+				-1.0
4,571,911	-				-1.4
4,572,071	+				-1.6
4,572,071	+				+1.2
4,572,071	+				-0.0
4,572,072	-				+0.0
4,572,072	-				-0.2
4,572,072	-				-1.0
4,572,105	-		Pf6N2E2_3935	0.11	-1.8
4,572,105	-		Pf6N2E2_3935	0.11	-3.2
4,572,275	+		Pf6N2E2_3935	0.29	-0.4
4,572,275	+		Pf6N2E2_3935	0.29	-1.2
4,572,275	+		Pf6N2E2_3935	0.29	+0.2
4,572,275	+		Pf6N2E2_3935	0.29	+0.3
4,572,276	-		Pf6N2E2_3935	0.29	+0.6
4,572,276	-		Pf6N2E2_3935	0.29	+1.2
4,572,276	-		Pf6N2E2_3935	0.29	+0.1
4,572,404	+		Pf6N2E2_3935	0.43	+0.2
4,572,404	+		Pf6N2E2_3935	0.43	+0.3
4,572,404	+		Pf6N2E2_3935	0.43	-0.7
4,572,404	+		Pf6N2E2_3935	0.43	+0.2
4,572,404	+		Pf6N2E2_3935	0.43	+0.9
4,572,404	+		Pf6N2E2_3935	0.43	+0.0
4,572,404	+		Pf6N2E2_3935	0.43	-0.2
4,572,404	+		Pf6N2E2_3935	0.43	+1.0
4,572,404	+		Pf6N2E2_3935	0.43	+1.6
4,572,404	+		Pf6N2E2_3935	0.43	-0.7
4,572,404	+		Pf6N2E2_3935	0.43	-1.0
4,572,404	+		Pf6N2E2_3935	0.43	-2.8
4,572,404	+		Pf6N2E2_3935	0.43	+1.0
4,572,404	+		Pf6N2E2_3935	0.43	+1.6
4,572,404	+		Pf6N2E2_3935	0.43	+0.6
4,572,404	+		Pf6N2E2_3935	0.43	-0.1
4,572,404	+		Pf6N2E2_3935	0.43	-2.6
4,572,404	+		Pf6N2E2_3935	0.43	-1.0
4,572,404	+		Pf6N2E2_3935	0.43	-1.9
4,572,404	+		Pf6N2E2_3935	0.43	+2.6
4,572,405	-		Pf6N2E2_3935	0.43	+0.0
4,572,405	-		Pf6N2E2_3935	0.43	+0.1
4,572,405	-		Pf6N2E2_3935	0.43	+0.0
4,572,405	-		Pf6N2E2_3935	0.43	+0.6
4,572,405	-		Pf6N2E2_3935	0.43	-0.2
4,572,405	-		Pf6N2E2_3935	0.43	-0.7
4,572,405	-		Pf6N2E2_3935	0.43	+1.6
4,572,405	-		Pf6N2E2_3935	0.43	+0.8
4,572,406	+		Pf6N2E2_3935	0.43	+0.0
4,572,406	+		Pf6N2E2_3935	0.43	+0.2
4,572,406	+		Pf6N2E2_3935	0.43	-0.2
4,572,406	+		Pf6N2E2_3935	0.43	-0.9
4,572,406	+		Pf6N2E2_3935	0.43	+1.0
4,572,406	+		Pf6N2E2_3935	0.43	-1.5
4,572,406	+		Pf6N2E2_3935	0.43	+0.8
4,572,406	+		Pf6N2E2_3935	0.43	+0.0
4,572,407	-		Pf6N2E2_3935	0.43	-2.6
4,572,407	-		Pf6N2E2_3935	0.43	+1.0
4,572,407	-		Pf6N2E2_3935	0.43	-0.5
4,572,407	-		Pf6N2E2_3935	0.43	+0.0
4,572,512	+		Pf6N2E2_3935	0.54	+0.5
4,572,512	+		Pf6N2E2_3935	0.54	+1.6
4,572,512	+		Pf6N2E2_3935	0.54	+1.0
4,572,512	+		Pf6N2E2_3935	0.54	+0.2
4,572,512	+		Pf6N2E2_3935	0.54	+0.0
4,572,512	+		Pf6N2E2_3935	0.54	-0.7
4,572,513	-		Pf6N2E2_3935	0.54	+0.3
4,572,513	-		Pf6N2E2_3935	0.54	-2.4
4,572,588	+		Pf6N2E2_3935	0.62	-0.3
4,572,887	+				+0.2
4,572,887	+				-1.0
4,572,887	+				+0.0
4,572,887	+				-0.4
4,572,888	-				+1.0
4,572,888	-				-1.0
4,572,888	-				+0.2
4,572,888	-				+0.4
4,572,888	-				-0.0
4,572,914	+				+1.2
4,572,915	-				+0.6
4,572,915	-				+0.0
4,572,915	-				+0.7
4,572,915	-				-0.2
4,572,915	-				+1.6
4,572,944	+				-0.2
4,572,944	+				-0.7
4,572,945	-				-2.0
4,572,945	-				-1.5
4,572,957	+				+1.2
4,572,957	+				-1.4
4,572,957	+				+0.2
4,572,957	+				-1.0
4,572,958	-				+0.6
4,572,958	-				+0.6
4,572,958	-				+1.9
4,572,958	-				+0.5
4,572,974	+				-0.9
4,572,975	-				-0.5
4,572,995	+				-0.0
4,573,040	+				+0.6
4,573,349	-		Pf6N2E2_3936	0.32	+0.0
4,573,434	+		Pf6N2E2_3936	0.41	+0.0
4,573,434	+		Pf6N2E2_3936	0.41	+0.2
4,573,434	+		Pf6N2E2_3936	0.41	+1.0
4,573,434	+		Pf6N2E2_3936	0.41	+1.0
4,573,434	+		Pf6N2E2_3936	0.41	-0.8
4,573,434	+		Pf6N2E2_3936	0.41	-0.7
4,573,434	+		Pf6N2E2_3936	0.41	-0.2
4,573,434	+		Pf6N2E2_3936	0.41	+0.2
4,573,434	+		Pf6N2E2_3936	0.41	+0.3
4,573,434	+		Pf6N2E2_3936	0.41	+0.0
4,573,434	+		Pf6N2E2_3936	0.41	+0.1
4,573,434	+		Pf6N2E2_3936	0.41	-1.4
4,573,435	-		Pf6N2E2_3936	0.41	-0.1
4,573,435	-		Pf6N2E2_3936	0.41	+0.9
4,573,435	-		Pf6N2E2_3936	0.41	+0.3
4,573,435	-		Pf6N2E2_3936	0.41	-2.0
4,573,435	-		Pf6N2E2_3936	0.41	+0.1
4,573,435	-		Pf6N2E2_3936	0.41	-0.4
4,573,435	-		Pf6N2E2_3936	0.41	-0.1
4,573,435	-		Pf6N2E2_3936	0.41	-0.7
4,573,435	-		Pf6N2E2_3936	0.41	+0.1
4,573,435	-		Pf6N2E2_3936	0.41	-0.1
4,573,435	-		Pf6N2E2_3936	0.41	+0.0
4,573,435	-		Pf6N2E2_3936	0.41	+0.2
4,573,435	-		Pf6N2E2_3936	0.41	-0.6
4,573,435	-		Pf6N2E2_3936	0.41	+0.0
4,573,435	-		Pf6N2E2_3936	0.41	+0.2
4,573,435	-		Pf6N2E2_3936	0.41	+0.0
4,573,435	-		Pf6N2E2_3936	0.41	+0.3
4,573,526	-		Pf6N2E2_3936	0.51	-0.3
4,573,576	-		Pf6N2E2_3936	0.56	+0.5
4,573,585	+		Pf6N2E2_3936	0.57	-2.0
4,573,632	+		Pf6N2E2_3936	0.62	+0.2
4,573,632	+		Pf6N2E2_3936	0.62	+1.6
4,573,633	-		Pf6N2E2_3936	0.63	-3.0
4,573,674	+		Pf6N2E2_3936	0.67	+0.2
4,573,675	-		Pf6N2E2_3936	0.67	-2.2
4,573,746	+		Pf6N2E2_3936	0.75	+0.2
4,573,746	+		Pf6N2E2_3936	0.75	+0.3
4,573,746	+		Pf6N2E2_3936	0.75	-1.4
4,573,769	-		Pf6N2E2_3936	0.77	-0.3
4,573,769	-		Pf6N2E2_3936	0.77	-0.4
4,573,769	-		Pf6N2E2_3936	0.77	+0.6
4,573,769	-		Pf6N2E2_3936	0.77	-1.0
4,573,769	-		Pf6N2E2_3936	0.77	-1.0
4,573,769	-		Pf6N2E2_3936	0.77	+0.2
4,573,769	-		Pf6N2E2_3936	0.77	-1.0
4,573,920	+				+0.0
4,573,921	-				+0.8
4,573,921	-				-0.4
4,573,921	-				-1.1