Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3581

Experiment: nitrogen source Ammonium chloride 20mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source Ammonium chloride 20mM
4,171,490	+		Pf6N2E2_3580	0.48	+0.9
4,171,491	-		Pf6N2E2_3580	0.48	-0.9
4,171,556	+		Pf6N2E2_3580	0.53	-0.3
4,171,556	+		Pf6N2E2_3580	0.53	+0.3
4,171,557	-		Pf6N2E2_3580	0.53	+0.6
4,171,557	-		Pf6N2E2_3580	0.53	+1.3
4,171,557	-		Pf6N2E2_3580	0.53	+0.1
4,171,557	-		Pf6N2E2_3580	0.53	-0.3
4,171,613	+		Pf6N2E2_3580	0.58	+0.2
4,171,613	+		Pf6N2E2_3580	0.58	-0.3
4,171,613	+		Pf6N2E2_3580	0.58	+0.2
4,171,613	+		Pf6N2E2_3580	0.58	-0.8
4,171,613	+		Pf6N2E2_3580	0.58	-0.7
4,171,614	-		Pf6N2E2_3580	0.58	+0.3
4,171,614	-		Pf6N2E2_3580	0.58	-0.8
4,171,740	-		Pf6N2E2_3580	0.70	-0.0
4,171,943	+		Pf6N2E2_3580	0.87	+0.4
4,171,943	+		Pf6N2E2_3580	0.87	-2.8
4,171,943	+		Pf6N2E2_3580	0.87	+0.2
4,171,943	+		Pf6N2E2_3580	0.87	-0.6
4,171,943	+		Pf6N2E2_3580	0.87	+0.1
4,171,943	+		Pf6N2E2_3580	0.87	-0.1
4,171,943	+		Pf6N2E2_3580	0.87	+1.6
4,171,943	+		Pf6N2E2_3580	0.87	+0.0
4,171,943	+		Pf6N2E2_3580	0.87	+0.1
4,171,944	-		Pf6N2E2_3580	0.88	+0.9
4,171,944	-		Pf6N2E2_3580	0.88	+0.1
4,171,944	-		Pf6N2E2_3580	0.88	-0.2
4,171,944	-		Pf6N2E2_3580	0.88	+0.0
4,171,944	-		Pf6N2E2_3580	0.88	-1.1
4,171,944	-		Pf6N2E2_3580	0.88	-0.5
4,172,070	-				+0.0
4,172,070	-				-0.5
4,172,070	-				-0.2
4,172,110	+				+0.4
4,172,174	-				+0.0
4,172,197	-				-0.2
4,172,197	-				-0.5
4,172,197	-				+0.2
4,172,197	-				-0.7
4,172,203	-				+0.2
4,172,203	-				-1.0
4,172,271	+				-1.6
4,172,272	-				-0.0
4,172,275	+				+0.9
4,172,275	+				+0.0
4,172,275	+				+1.6
4,172,276	-				-0.3
4,172,342	+				+0.4
4,172,342	+				-1.2
4,172,343	-				-0.5
4,172,343	-				-1.1
4,172,387	+				+0.0
4,172,387	+				-1.6
4,172,388	-				+0.7
4,172,388	-				-0.4
4,172,388	-				-0.7
4,172,401	+				+0.6
4,172,401	+				-1.1
4,172,402	-				-1.4
4,172,402	-				-0.2
4,172,410	-				-0.4
4,172,410	-				-1.6
4,172,417	-				-0.1
4,172,490	+				-2.5
4,172,490	+				-0.4
4,172,490	+				+0.2
4,172,491	-				-1.1
4,172,511	+				+1.6
4,172,512	-				-2.7
4,172,512	-				-0.9
4,172,512	-				-0.7
4,172,512	-				-0.3
4,172,598	+		Pf6N2E2_3581	0.11	-0.2
4,172,598	+		Pf6N2E2_3581	0.11	-0.2
4,172,653	-		Pf6N2E2_3581	0.15	-0.6
4,172,763	+		Pf6N2E2_3581	0.24	+0.4
4,172,772	+		Pf6N2E2_3581	0.25	+0.2
4,172,772	+		Pf6N2E2_3581	0.25	-0.0
4,172,773	-		Pf6N2E2_3581	0.25	-0.4
4,172,773	-		Pf6N2E2_3581	0.25	+0.3
4,172,973	+		Pf6N2E2_3581	0.40	-0.3
4,172,973	+		Pf6N2E2_3581	0.40	+2.2
4,172,973	+		Pf6N2E2_3581	0.40	+0.0
4,172,973	+		Pf6N2E2_3581	0.40	+1.0
4,172,974	-		Pf6N2E2_3581	0.40	-0.1
4,172,974	-		Pf6N2E2_3581	0.40	+0.1
4,172,974	-		Pf6N2E2_3581	0.40	+1.7
4,172,976	+		Pf6N2E2_3581	0.40	+0.5
4,172,976	+		Pf6N2E2_3581	0.40	+1.6
4,172,976	+		Pf6N2E2_3581	0.40	-0.5
4,172,976	+		Pf6N2E2_3581	0.40	+0.6
4,172,977	-		Pf6N2E2_3581	0.41	+0.0
4,172,977	-		Pf6N2E2_3581	0.41	+0.0
4,173,027	+		Pf6N2E2_3581	0.44	-0.8
4,173,183	+		Pf6N2E2_3581	0.57	-2.5
4,173,399	+		Pf6N2E2_3581	0.73	-1.2
4,173,399	+		Pf6N2E2_3581	0.73	-1.4
4,173,399	+		Pf6N2E2_3581	0.73	-0.6
4,173,399	+		Pf6N2E2_3581	0.73	-0.7
4,173,400	-		Pf6N2E2_3581	0.74	+0.6
4,173,400	-		Pf6N2E2_3581	0.74	-1.3
4,173,400	-		Pf6N2E2_3581	0.74	-1.3
4,173,400	-		Pf6N2E2_3581	0.74	+0.1
4,173,400	-		Pf6N2E2_3581	0.74	+1.5
4,173,400	-		Pf6N2E2_3581	0.74	+0.4
4,173,400	-		Pf6N2E2_3581	0.74	+0.3
4,173,400	-		Pf6N2E2_3581	0.74	+0.0
4,173,509	+		Pf6N2E2_3581	0.82	-0.4
4,173,510	-		Pf6N2E2_3581	0.82	-0.6
4,173,717	-				-1.3
4,173,717	-				-2.4
4,173,833	+				+0.8
4,173,833	+				+0.4
4,173,834	-				-0.7
4,173,843	+				-0.2
4,173,843	+				-2.5
4,173,843	+				+0.2
4,173,843	+				+1.6
4,173,844	-				-0.4
4,173,844	-				+1.0
4,173,844	-				-3.1
4,173,844	-				-1.2
4,173,875	+				+1.4
4,173,876	-				-0.8
4,173,876	-				-0.1
4,173,906	-				-0.3
4,173,906	-				+0.4
4,174,072	-		Pf6N2E2_3582	0.16	-0.1
4,174,139	+		Pf6N2E2_3582	0.21	+0.5
4,174,139	+		Pf6N2E2_3582	0.21	+0.3
4,174,140	-		Pf6N2E2_3582	0.21	+1.1
4,174,140	-		Pf6N2E2_3582	0.21	-2.0
4,174,151	+		Pf6N2E2_3582	0.21	-0.1
4,174,151	+		Pf6N2E2_3582	0.21	+0.7
4,174,151	+		Pf6N2E2_3582	0.21	-1.2
4,174,151	+		Pf6N2E2_3582	0.21	-2.7
4,174,151	+		Pf6N2E2_3582	0.21	-0.5
4,174,151	+		Pf6N2E2_3582	0.21	+0.1
4,174,152	-		Pf6N2E2_3582	0.21	-2.6
4,174,152	-		Pf6N2E2_3582	0.21	+0.1
4,174,152	-		Pf6N2E2_3582	0.21	+0.2
4,174,152	-		Pf6N2E2_3582	0.21	+0.6
4,174,152	-		Pf6N2E2_3582	0.21	-0.5
4,174,152	-		Pf6N2E2_3582	0.21	+0.2
4,174,152	-		Pf6N2E2_3582	0.21	+0.0
4,174,226	+		Pf6N2E2_3582	0.26	-0.5
4,174,226	+		Pf6N2E2_3582	0.26	-0.8
4,174,226	+		Pf6N2E2_3582	0.26	+0.6
4,174,226	+		Pf6N2E2_3582	0.26	+0.4
4,174,226	+		Pf6N2E2_3582	0.26	-0.4
4,174,226	+		Pf6N2E2_3582	0.26	-0.0
4,174,226	+		Pf6N2E2_3582	0.26	-1.8
4,174,226	+		Pf6N2E2_3582	0.26	+0.1
4,174,226	+		Pf6N2E2_3582	0.26	+0.0
4,174,226	+		Pf6N2E2_3582	0.26	-0.4
4,174,226	+		Pf6N2E2_3582	0.26	-0.4
4,174,226	+		Pf6N2E2_3582	0.26	-0.2
4,174,226	+		Pf6N2E2_3582	0.26	+0.9
4,174,227	-		Pf6N2E2_3582	0.26	-0.9
4,174,227	-		Pf6N2E2_3582	0.26	+0.3
4,174,227	-		Pf6N2E2_3582	0.26	+0.6
4,174,227	-		Pf6N2E2_3582	0.26	-0.8
4,174,227	-		Pf6N2E2_3582	0.26	-0.4
4,174,227	-		Pf6N2E2_3582	0.26	+0.0
4,174,227	-		Pf6N2E2_3582	0.26	-0.8
4,174,227	-		Pf6N2E2_3582	0.26	-1.2
4,174,227	-		Pf6N2E2_3582	0.26	+0.2
4,174,227	-		Pf6N2E2_3582	0.26	-0.0
4,174,227	-		Pf6N2E2_3582	0.26	+1.9
4,174,227	-		Pf6N2E2_3582	0.26	-0.8
4,174,227	-		Pf6N2E2_3582	0.26	-0.6
4,174,229	+		Pf6N2E2_3582	0.27	-1.3
4,174,229	+		Pf6N2E2_3582	0.27	-1.5
4,174,229	+		Pf6N2E2_3582	0.27	+0.2
4,174,229	+		Pf6N2E2_3582	0.27	+2.2
4,174,229	+		Pf6N2E2_3582	0.27	+0.6
4,174,230	-		Pf6N2E2_3582	0.27	-0.7
4,174,574	-		Pf6N2E2_3582	0.50	+0.2
4,174,574	-		Pf6N2E2_3582	0.50	-0.8
4,174,574	-		Pf6N2E2_3582	0.50	-1.2
4,174,574	-		Pf6N2E2_3582	0.50	-0.2