Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21825

Experiment: trans-aconitic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	trans-aconitic 5 mM (C)
4,912,269	-		PFLU_RS21820	0.52	-1.0
4,912,269	-		PFLU_RS21820	0.52	-0.4
4,912,364	-		PFLU_RS21820	0.58	-0.6
4,912,445	+		PFLU_RS21820	0.64	-0.9
4,912,446	-		PFLU_RS21820	0.64	-0.3
4,912,446	-		PFLU_RS21820	0.64	-1.6
4,912,472	-		PFLU_RS21820	0.65	-0.7
4,912,546	+		PFLU_RS21820	0.71	-1.5
4,912,551	+		PFLU_RS21820	0.71	+0.2
4,912,585	+		PFLU_RS21820	0.73	-1.0
4,912,600	+		PFLU_RS21820	0.74	-0.3
4,912,600	+		PFLU_RS21820	0.74	-0.8
4,912,600	+		PFLU_RS21820	0.74	-2.0
4,912,601	-		PFLU_RS21820	0.74	-0.9
4,912,629	+		PFLU_RS21820	0.76	-0.8
4,912,629	+		PFLU_RS21820	0.76	-1.0
4,912,629	+		PFLU_RS21820	0.76	+0.6
4,912,630	-		PFLU_RS21820	0.76	-1.4
4,912,648	+		PFLU_RS21820	0.78	+0.1
4,912,648	+		PFLU_RS21820	0.78	+0.9
4,912,648	+		PFLU_RS21820	0.78	-1.3
4,912,648	+		PFLU_RS21820	0.78	-2.0
4,912,648	+		PFLU_RS21820	0.78	-3.3
4,912,648	+		PFLU_RS21820	0.78	-2.5
4,912,648	+		PFLU_RS21820	0.78	-2.0
4,912,648	+		PFLU_RS21820	0.78	-1.1
4,912,649	-		PFLU_RS21820	0.78	+0.8
4,912,649	-		PFLU_RS21820	0.78	-1.4
4,912,649	-		PFLU_RS21820	0.78	-2.1
4,912,649	-		PFLU_RS21820	0.78	-0.2
4,912,697	-		PFLU_RS21820	0.81	-2.8
4,912,762	+		PFLU_RS21820	0.85	-1.8
4,912,762	+		PFLU_RS21820	0.85	-0.3
4,912,763	-		PFLU_RS21820	0.85	-2.4
4,912,763	-		PFLU_RS21820	0.85	-0.4
4,912,852	+				+0.4
4,912,891	+				-1.0
4,912,891	+				-1.4
4,912,891	+				-2.0
4,912,891	+				-0.1
4,912,891	+				-2.1
4,912,891	+				-0.8
4,912,891	+				-0.4
4,912,891	+				-1.4
4,912,891	+				-1.6
4,912,891	+				-2.0
4,912,891	+				+0.2
4,912,891	+				-0.9
4,912,891	+				-3.0
4,912,891	+				-2.7
4,912,892	-				-2.3
4,912,892	-				-1.7
4,912,892	-				-0.8
4,912,892	-				-0.6
4,912,892	-				-2.1
4,912,892	-				-0.6
4,912,892	-				-0.2
4,912,892	-				-1.5
4,912,892	-				-0.4
4,912,892	-				-1.5
4,912,892	-				+0.2
4,912,892	-				-1.6
4,912,892	-				-0.9
4,912,892	-				-0.6
4,912,892	-				-1.3
4,912,892	-				-0.4
4,912,892	-				-1.1
4,912,892	-				-0.0
4,912,892	-				-0.3
4,912,892	-				-0.3
4,912,937	-				-0.7
4,912,937	-				+0.6
4,912,961	+				+0.5
4,912,961	+				-0.6
4,912,961	+				-1.1
4,912,961	+				-1.8
4,912,962	-				-3.0
4,912,962	-				-2.0
4,912,962	-				-0.7
4,912,962	-				-1.0
4,912,962	-				-2.6
4,912,962	-				-0.7
4,912,962	-				-0.6
4,912,967	+				-0.3
4,912,967	+				-1.1
4,912,967	+				-1.6
4,912,967	+				-1.0
4,912,968	-				-1.7
4,912,998	+				+0.1
4,913,045	+				-2.0
4,913,045	+				-0.5
4,913,045	+				-0.7
4,913,045	+				+0.5
4,913,045	+				+0.3
4,913,045	+				-1.3
4,913,045	+				+0.0
4,913,045	+				+0.7
4,913,045	+				-1.1
4,913,046	-				-0.1
4,913,046	-				+0.6
4,913,046	-				+1.2
4,913,046	-				+1.3
4,913,046	-				-0.8
4,913,046	-				+0.0
4,913,046	-				+1.0
4,913,046	-				+0.5
4,913,046	-				-1.0
4,913,046	-				+0.5
4,913,046	-				-1.4
4,913,046	-				+0.3
4,913,046	-				-2.2
4,913,049	+				-0.9
4,913,049	+				-1.7
4,913,049	+				-1.1
4,913,049	+				-1.9
4,913,049	+				-2.0
4,913,049	+				-1.9
4,913,049	+				+0.4
4,913,049	+				-1.2
4,913,049	+				-0.9
4,913,049	+				-0.6
4,913,050	-				-0.1
4,913,050	-				-1.5
4,913,050	-				+0.1
4,913,050	-				-1.7
4,913,050	-				-1.6
4,913,050	-				-0.3
4,913,050	-				-1.1
4,913,050	-				-0.8
4,913,052	+				-2.1
4,913,052	+				-0.9
4,913,052	+				-0.6
4,913,052	+				-1.8
4,913,052	+				-1.2
4,913,052	+				-1.2
4,913,052	+				-1.4
4,913,052	+				-0.0
4,913,052	+				-1.1
4,913,052	+				-0.7
4,913,052	+				-1.7
4,913,052	+				-0.6
4,913,052	+				-1.9
4,913,052	+				-0.4
4,913,052	+				+0.2
4,913,053	-				-0.4
4,913,053	-				-0.7
4,913,053	-				-1.3
4,913,053	-				+0.8
4,913,053	-				-0.4
4,913,053	-				-2.3
4,913,053	-				+0.4
4,913,053	-				-1.1
4,913,053	-				-1.0
4,913,053	-				-0.6
4,913,053	-				-0.7
4,913,053	-				-0.7
4,913,053	-				-0.7
4,913,053	-				-0.9
4,913,053	-				-0.6
4,913,053	-				-0.3
4,913,057	-				-0.2
4,913,057	-				-1.6
4,913,057	-				+0.0
4,913,057	-				-2.2
4,913,057	-				+0.2
4,913,137	+				-0.7
4,913,184	-				-0.1
4,913,235	-				+0.2
4,913,532	+		PFLU_RS21825	0.31	+0.2
4,913,537	+		PFLU_RS21825	0.32	-0.5
4,913,537	+		PFLU_RS21825	0.32	-0.1
4,913,537	+		PFLU_RS21825	0.32	-0.3
4,913,537	+		PFLU_RS21825	0.32	-0.1
4,913,538	-		PFLU_RS21825	0.32	-2.4
4,913,538	-		PFLU_RS21825	0.32	-0.1
4,913,538	-		PFLU_RS21825	0.32	+0.1
4,913,538	-		PFLU_RS21825	0.32	-0.4
4,913,538	-		PFLU_RS21825	0.32	-0.5
4,913,573	+		PFLU_RS21825	0.36	-2.0
4,913,573	+		PFLU_RS21825	0.36	+0.2
4,913,573	+		PFLU_RS21825	0.36	-0.1
4,913,574	-		PFLU_RS21825	0.36	+0.9
4,913,574	-		PFLU_RS21825	0.36	-0.8
4,913,597	+		PFLU_RS21825	0.38	-0.0
4,913,597	+		PFLU_RS21825	0.38	-1.3
4,913,598	-		PFLU_RS21825	0.38	-0.2
4,913,598	-		PFLU_RS21825	0.38	-0.7
4,913,598	-		PFLU_RS21825	0.38	-0.7
4,913,598	-		PFLU_RS21825	0.38	+0.2
4,913,598	-		PFLU_RS21825	0.38	-1.2
4,913,598	-		PFLU_RS21825	0.38	-1.0
4,913,598	-		PFLU_RS21825	0.38	-0.3
4,913,598	-		PFLU_RS21825	0.38	-1.4
4,913,806	+		PFLU_RS21825	0.61	-0.8
4,913,806	+		PFLU_RS21825	0.61	-1.0
4,913,806	+		PFLU_RS21825	0.61	+0.5
4,913,806	+		PFLU_RS21825	0.61	+0.3
4,913,806	+		PFLU_RS21825	0.61	+0.9
4,913,806	+		PFLU_RS21825	0.61	+1.2
4,913,806	+		PFLU_RS21825	0.61	+0.7
4,913,806	+		PFLU_RS21825	0.61	-0.6
4,913,806	+		PFLU_RS21825	0.61	-1.0
4,913,806	+		PFLU_RS21825	0.61	+0.2
4,913,806	+		PFLU_RS21825	0.61	-1.5
4,913,807	-		PFLU_RS21825	0.61	+0.1
4,913,807	-		PFLU_RS21825	0.61	-2.0
4,913,807	-		PFLU_RS21825	0.61	-1.5
4,913,807	-		PFLU_RS21825	0.61	+0.4
4,913,807	-		PFLU_RS21825	0.61	-0.5
4,913,807	-		PFLU_RS21825	0.61	+0.1
4,913,807	-		PFLU_RS21825	0.61	-1.7
4,913,807	-		PFLU_RS21825	0.61	-1.6
4,913,807	-		PFLU_RS21825	0.61	-0.7
4,913,807	-		PFLU_RS21825	0.61	-1.0
4,913,807	-		PFLU_RS21825	0.61	-2.2
4,913,807	-		PFLU_RS21825	0.61	+0.2
4,913,807	-		PFLU_RS21825	0.61	+0.2
4,913,807	-		PFLU_RS21825	0.61	-0.3
4,913,807	-		PFLU_RS21825	0.61	+0.6
4,913,807	-		PFLU_RS21825	0.61	+2.2
4,913,807	-		PFLU_RS21825	0.61	+0.1
4,913,815	+		PFLU_RS21825	0.62	-1.2
4,913,815	+		PFLU_RS21825	0.62	+0.1
4,913,815	+		PFLU_RS21825	0.62	+1.9
4,913,815	+		PFLU_RS21825	0.62	-0.6
4,913,815	+		PFLU_RS21825	0.62	-0.9
4,913,815	+		PFLU_RS21825	0.62	+0.6
4,913,815	+		PFLU_RS21825	0.62	+0.9
4,913,815	+		PFLU_RS21825	0.62	+0.5
4,913,815	+		PFLU_RS21825	0.62	-1.6
4,913,816	-		PFLU_RS21825	0.62	+1.2
4,913,816	-		PFLU_RS21825	0.62	-0.9
4,913,816	-		PFLU_RS21825	0.62	+0.8
4,913,816	-		PFLU_RS21825	0.62	-0.3
4,913,816	-		PFLU_RS21825	0.62	-1.0
4,913,816	-		PFLU_RS21825	0.62	+0.5
4,913,816	-		PFLU_RS21825	0.62	-0.2
4,913,816	-		PFLU_RS21825	0.62	-1.1
4,913,816	-		PFLU_RS21825	0.62	-0.1
4,913,816	-		PFLU_RS21825	0.62	+1.2
4,913,821	+		PFLU_RS21825	0.62	-0.5
4,913,821	+		PFLU_RS21825	0.62	-0.0
4,913,821	+		PFLU_RS21825	0.62	-0.9
4,913,822	-		PFLU_RS21825	0.62	-1.2
4,913,822	-		PFLU_RS21825	0.62	+1.0
4,913,822	-		PFLU_RS21825	0.62	-0.7
4,913,843	+		PFLU_RS21825	0.65	+0.3
4,914,115	+				-1.2
4,914,115	+				-0.5
4,914,115	+				-0.5
4,914,115	+				-1.4
4,914,115	+				-0.2
4,914,115	+				+0.9
4,914,115	+				+1.0
4,914,116	-				+0.0
4,914,116	-				-0.1
4,914,116	-				+0.6
4,914,116	-				-0.3
4,914,116	-				-1.0
4,914,116	-				+0.5
4,914,116	-				+0.9
4,914,116	-				+0.4
4,914,116	-				-0.8
4,914,116	-				-0.5
4,914,116	-				-0.1
4,914,116	-				+1.2
4,914,116	-				-0.6
4,914,119	+				+1.2
4,914,119	+				-0.3
4,914,119	+				+0.6
4,914,119	+				-0.4
4,914,120	-				+0.1
4,914,120	-				-1.3
4,914,120	-				+1.9
4,914,120	-				+0.2
4,914,120	-				-0.6
4,914,120	-				-1.1
4,914,142	+				-0.5
4,914,142	+				-0.1
4,914,142	+				-0.5
4,914,142	+				-2.0
4,914,142	+				+0.9
4,914,143	-				-0.3
4,914,143	-				-0.8
4,914,143	-				+0.1
4,914,160	-				-0.6
4,914,185	-				-0.6
4,914,187	+				+0.6
4,914,187	+				+0.1
4,914,187	+				-1.1
4,914,187	+				-0.1
4,914,187	+				+1.8
4,914,187	+				-1.1
4,914,187	+				-0.5
4,914,187	+				+1.9
4,914,187	+				-0.8
4,914,187	+				-0.1
4,914,187	+				-1.1
4,914,187	+				+0.0
4,914,187	+				-0.8
4,914,187	+				-0.9
4,914,188	-				+0.6
4,914,188	-				+1.2
4,914,188	-				+1.2
4,914,188	-				+2.0
4,914,188	-				-1.1
4,914,191	+				+0.4
4,914,191	+				+0.7
4,914,191	+				+1.4
4,914,234	+				+0.3
4,914,234	+				-1.0
4,914,234	+				+1.6
4,914,234	+				+0.7
4,914,234	+				+0.9
4,914,235	-				-0.8
4,914,235	-				-1.1
4,914,243	+				+0.5
4,914,296	+				-0.0
4,914,296	+				-0.1
4,914,296	+				-0.1
4,914,296	+				+0.5
4,914,296	+				-0.4
4,914,296	+				+0.4
4,914,296	+				-0.5
4,914,296	+				+0.7
4,914,312	+				+0.6
4,914,312	+				+0.1
4,914,312	+				+0.6
4,914,312	+				+0.3
4,914,312	+				+0.1
4,914,384	+				-0.5
4,914,384	+				+0.1
4,914,384	+				+0.3
4,914,384	+				-1.8
4,914,384	+				+0.3
4,914,384	+				-2.0
4,914,384	+				-0.4
4,914,438	+				+1.0
4,914,438	+				-0.0
4,914,438	+				-0.3
4,914,438	+				+0.0
4,914,438	+				-0.2
4,914,438	+				+0.4
4,914,438	+				+0.6
4,914,438	+				-1.6
4,914,438	+				+0.9
4,914,439	-				+1.2
4,914,439	-				+1.6
4,914,439	-				+2.0
4,914,439	-				-2.3
4,914,439	-				-0.2
4,914,439	-				-0.4
4,914,439	-				-0.6
4,914,448	+				+0.3
4,914,448	+				-1.3
4,914,448	+				+0.2
4,914,448	+				+1.7
4,914,448	+				+0.8
4,914,448	+				-0.0
4,914,448	+				+0.5
4,914,448	+				-1.0
4,914,448	+				-0.8
4,914,448	+				-0.1
4,914,448	+				+0.2
4,914,448	+				-1.1
4,914,448	+				-0.7
4,914,448	+				-1.8
4,914,448	+				-0.5
4,914,448	+				+0.2
4,914,448	+				+0.2
4,914,448	+				+0.0
4,914,448	+				-0.1
4,914,448	+				+0.1
4,914,448	+				-0.6
4,914,448	+				-1.3
4,914,448	+				-1.0
4,914,449	-				+1.2
4,914,449	-				+0.2
4,914,449	-				-0.8
4,914,449	-				+0.2
4,914,449	-				+0.2
4,914,449	-				-1.1
4,914,584	+				-2.3
4,914,584	+				-1.5
4,914,584	+				-0.8
4,914,585	-				-1.1
4,914,585	-				-0.6
4,914,585	-				-1.8
4,914,592	-				-1.1
4,914,695	+		PFLU_RS21830	0.15	-2.6
4,914,695	+		PFLU_RS21830	0.15	-1.5
4,914,696	-		PFLU_RS21830	0.15	-0.6
4,914,696	-		PFLU_RS21830	0.15	-1.1
4,914,696	-		PFLU_RS21830	0.15	-1.4
4,914,696	-		PFLU_RS21830	0.15	-2.0
4,914,699	+		PFLU_RS21830	0.16	-1.1
4,914,699	+		PFLU_RS21830	0.16	-1.9
4,914,699	+		PFLU_RS21830	0.16	-0.8
4,914,699	+		PFLU_RS21830	0.16	-0.7
4,914,699	+		PFLU_RS21830	0.16	-1.6
4,914,699	+		PFLU_RS21830	0.16	+0.4
4,914,699	+		PFLU_RS21830	0.16	-1.7
4,914,699	+		PFLU_RS21830	0.16	-1.2
4,914,700	-		PFLU_RS21830	0.16	-1.4
4,914,700	-		PFLU_RS21830	0.16	-1.5
4,914,700	-		PFLU_RS21830	0.16	-1.0
4,914,700	-		PFLU_RS21830	0.16	-3.0
4,914,700	-		PFLU_RS21830	0.16	-3.5
4,914,700	-		PFLU_RS21830	0.16	+0.9
4,914,700	-		PFLU_RS21830	0.16	-1.5
4,914,700	-		PFLU_RS21830	0.16	-0.9
4,914,700	-		PFLU_RS21830	0.16	+0.5
4,914,728	+		PFLU_RS21830	0.17	-1.7
4,914,728	+		PFLU_RS21830	0.17	-1.5
4,914,728	+		PFLU_RS21830	0.17	-1.6
4,914,728	+		PFLU_RS21830	0.17	-1.4
4,914,729	-		PFLU_RS21830	0.17	-0.4
4,914,729	-		PFLU_RS21830	0.17	-3.0
4,914,729	-		PFLU_RS21830	0.17	-0.9
4,914,729	-		PFLU_RS21830	0.17	-2.3
4,914,729	-		PFLU_RS21830	0.17	-3.0
4,914,858	-		PFLU_RS21830	0.25	-2.7
4,914,875	+		PFLU_RS21830	0.26	-0.8
4,914,875	+		PFLU_RS21830	0.26	-1.0
4,914,875	+		PFLU_RS21830	0.26	-2.0
4,914,875	+		PFLU_RS21830	0.26	-0.0
4,914,875	+		PFLU_RS21830	0.26	-0.0
4,914,875	+		PFLU_RS21830	0.26	-1.4
4,914,875	+		PFLU_RS21830	0.26	-1.1
4,914,875	+		PFLU_RS21830	0.26	-1.5
4,914,875	+		PFLU_RS21830	0.26	-1.2
4,914,875	+		PFLU_RS21830	0.26	-2.8
4,914,875	+		PFLU_RS21830	0.26	-1.4
4,914,875	+		PFLU_RS21830	0.26	-1.6
4,914,875	+		PFLU_RS21830	0.26	-0.5
4,914,876	-		PFLU_RS21830	0.26	-0.8
4,914,876	-		PFLU_RS21830	0.26	-0.9
4,914,876	-		PFLU_RS21830	0.26	-0.6
4,914,876	-		PFLU_RS21830	0.26	-0.8
4,914,876	-		PFLU_RS21830	0.26	-1.0
4,914,876	-		PFLU_RS21830	0.26	-0.8
4,914,955	+		PFLU_RS21830	0.31	-1.4
4,914,955	+		PFLU_RS21830	0.31	-1.6
4,914,956	-		PFLU_RS21830	0.31	-1.4
4,914,956	-		PFLU_RS21830	0.31	-0.3
4,914,956	-		PFLU_RS21830	0.31	+0.2
4,914,965	+		PFLU_RS21830	0.32	-3.3
4,914,965	+		PFLU_RS21830	0.32	-0.9
4,914,965	+		PFLU_RS21830	0.32	-1.0
4,914,966	-		PFLU_RS21830	0.32	-1.3
4,915,042	+		PFLU_RS21830	0.37	-1.0
4,915,042	+		PFLU_RS21830	0.37	-1.0
4,915,042	+		PFLU_RS21830	0.37	-1.8
4,915,042	+		PFLU_RS21830	0.37	-1.7
4,915,042	+		PFLU_RS21830	0.37	-2.0
4,915,043	-		PFLU_RS21830	0.37	+0.5
4,915,043	-		PFLU_RS21830	0.37	-2.3
4,915,043	-		PFLU_RS21830	0.37	-1.2
4,915,043	-		PFLU_RS21830	0.37	-1.3
4,915,043	-		PFLU_RS21830	0.37	-2.8
4,915,043	-		PFLU_RS21830	0.37	-0.9
4,915,043	-		PFLU_RS21830	0.37	-1.5
4,915,091	+		PFLU_RS21830	0.40	-1.3
4,915,091	+		PFLU_RS21830	0.40	-0.7
4,915,091	+		PFLU_RS21830	0.40	-1.6
4,915,091	+		PFLU_RS21830	0.40	-1.0
4,915,092	-		PFLU_RS21830	0.40	-1.8
4,915,092	-		PFLU_RS21830	0.40	-0.8
4,915,092	-		PFLU_RS21830	0.40	-1.3
4,915,092	-		PFLU_RS21830	0.40	-0.4
4,915,092	-		PFLU_RS21830	0.40	-1.5
4,915,092	-		PFLU_RS21830	0.40	-1.8
4,915,094	+		PFLU_RS21830	0.40	-2.0
4,915,094	+		PFLU_RS21830	0.40	-1.5
4,915,094	+		PFLU_RS21830	0.40	+1.2
4,915,095	-		PFLU_RS21830	0.40	-2.4
4,915,095	-		PFLU_RS21830	0.40	-2.5
4,915,095	-		PFLU_RS21830	0.40	-0.3
4,915,095	-		PFLU_RS21830	0.40	-2.0