Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3962

Experiment: nitrogen source nitrite 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrite 1mM
4,601,276	-		Pf6N2E2_3961	0.41	+0.8
4,601,360	-		Pf6N2E2_3961	0.46	+0.5
4,601,627	-		Pf6N2E2_3961	0.64	-0.1
4,601,722	+		Pf6N2E2_3961	0.70	-0.6
4,601,722	+		Pf6N2E2_3961	0.70	-0.1
4,601,722	+		Pf6N2E2_3961	0.70	+0.2
4,601,722	+		Pf6N2E2_3961	0.70	+1.6
4,601,722	+		Pf6N2E2_3961	0.70	-0.0
4,601,722	+		Pf6N2E2_3961	0.70	+0.9
4,601,722	+		Pf6N2E2_3961	0.70	+1.3
4,601,722	+		Pf6N2E2_3961	0.70	+0.4
4,601,722	+		Pf6N2E2_3961	0.70	+1.2
4,601,722	+		Pf6N2E2_3961	0.70	+1.1
4,601,723	-		Pf6N2E2_3961	0.70	+0.9
4,601,723	-		Pf6N2E2_3961	0.70	+0.5
4,601,723	-		Pf6N2E2_3961	0.70	+1.6
4,601,723	-		Pf6N2E2_3961	0.70	+0.7
4,601,723	-		Pf6N2E2_3961	0.70	-3.3
4,601,869	+		Pf6N2E2_3961	0.80	+2.7
4,601,974	+		Pf6N2E2_3961	0.87	+1.5
4,601,974	+		Pf6N2E2_3961	0.87	+1.5
4,601,974	+		Pf6N2E2_3961	0.87	+0.9
4,601,974	+		Pf6N2E2_3961	0.87	-0.1
4,601,975	-		Pf6N2E2_3961	0.87	+0.7
4,601,975	-		Pf6N2E2_3961	0.87	+0.8
4,602,040	+				-0.7
4,602,040	+				+0.4
4,602,040	+				+0.5
4,602,040	+				-1.1
4,602,040	+				+0.3
4,602,040	+				-0.8
4,602,041	-				+0.3
4,602,041	-				+0.5
4,602,041	-				+0.2
4,602,041	-				+2.1
4,602,044	+				+1.0
4,602,044	+				+1.1
4,602,044	+				-2.1
4,602,044	+				+0.5
4,602,044	+				+1.6
4,602,045	-				+0.5
4,602,045	-				+0.8
4,602,045	-				+0.6
4,602,045	-				-0.2
4,602,045	-				+0.5
4,602,045	-				-0.3
4,602,045	-				+0.5
4,602,045	-				+0.5
4,602,045	-				+0.5
4,602,084	-				+0.4
4,602,151	-				+0.4
4,602,151	-				+0.3
4,602,164	+				-0.5
4,602,164	+				-0.8
4,602,164	+				+0.7
4,602,164	+				+1.6
4,602,165	-				-0.1
4,602,165	-				-2.0
4,602,206	-				+0.3
4,602,244	+				+0.6
4,602,245	-				+1.5
4,602,349	+				-0.1
4,602,349	+				+1.0
4,602,349	+				+0.2
4,602,350	-				+0.7
4,602,350	-				+0.1
4,602,536	+				+0.1
4,602,536	+				+1.0
4,602,536	+				+0.5
4,602,536	+				-0.2
4,602,536	+				+1.5
4,602,536	+				+1.6
4,602,536	+				+1.6
4,602,536	+				+0.9
4,602,536	+				+0.7
4,602,536	+				+1.4
4,602,536	+				-1.3
4,602,536	+				+1.0
4,602,536	+				+0.4
4,602,536	+				-0.2
4,602,537	-				-0.1
4,602,537	-				-1.0
4,602,537	-				-0.1
4,602,537	-				+1.0
4,602,537	-				-1.8
4,602,537	-				+0.5
4,602,537	-				+1.0
4,602,537	-				+0.1
4,602,540	+				+1.5
4,602,540	+				+0.0
4,602,571	-				-1.4
4,602,664	-				+0.2
4,602,776	+				+3.5
4,602,776	+				+0.4
4,602,776	+				+1.2
4,602,776	+				+0.6
4,602,777	-				-0.1
4,602,777	-				-0.1
4,602,777	-				-1.0
4,603,082	+		Pf6N2E2_3962	0.12	+1.2
4,603,083	-		Pf6N2E2_3962	0.12	-0.8
4,603,083	-		Pf6N2E2_3962	0.12	-0.1
4,603,083	-		Pf6N2E2_3962	0.12	+0.6
4,603,305	+		Pf6N2E2_3962	0.15	-2.5
4,603,305	+		Pf6N2E2_3962	0.15	+0.8
4,603,305	+		Pf6N2E2_3962	0.15	+1.2
4,603,306	-		Pf6N2E2_3962	0.15	-1.3
4,603,306	-		Pf6N2E2_3962	0.15	+1.5
4,603,306	-		Pf6N2E2_3962	0.15	+1.4
4,603,388	+		Pf6N2E2_3962	0.16	-1.6
4,603,388	+		Pf6N2E2_3962	0.16	+0.3
4,603,388	+		Pf6N2E2_3962	0.16	+0.3
4,603,388	+		Pf6N2E2_3962	0.16	+0.6
4,603,389	-		Pf6N2E2_3962	0.16	+0.6
4,603,389	-		Pf6N2E2_3962	0.16	+0.7
4,603,608	+		Pf6N2E2_3962	0.19	+0.2
4,603,608	+		Pf6N2E2_3962	0.19	-1.1
4,603,609	-		Pf6N2E2_3962	0.19	-0.0
4,603,609	-		Pf6N2E2_3962	0.19	-0.5
4,603,633	+		Pf6N2E2_3962	0.20	+0.6
4,603,634	-		Pf6N2E2_3962	0.20	-0.7
4,603,694	+		Pf6N2E2_3962	0.20	+0.4
4,603,694	+		Pf6N2E2_3962	0.20	-0.4
4,603,695	-		Pf6N2E2_3962	0.21	-0.2
4,603,695	-		Pf6N2E2_3962	0.21	+0.5
4,603,713	+		Pf6N2E2_3962	0.21	+0.3
4,603,714	-		Pf6N2E2_3962	0.21	-0.7
4,603,752	+		Pf6N2E2_3962	0.21	+0.2
4,604,000	+		Pf6N2E2_3962	0.25	+0.4
4,604,001	-		Pf6N2E2_3962	0.25	+0.3
4,604,001	-		Pf6N2E2_3962	0.25	-0.2
4,604,001	-		Pf6N2E2_3962	0.25	-0.4
4,604,001	-		Pf6N2E2_3962	0.25	+0.5
4,604,127	+		Pf6N2E2_3962	0.26	+0.4
4,604,128	-		Pf6N2E2_3962	0.26	-0.5
4,604,128	-		Pf6N2E2_3962	0.26	-0.1
4,604,306	+		Pf6N2E2_3962	0.29	-0.5
4,604,306	+		Pf6N2E2_3962	0.29	+0.3
4,604,306	+		Pf6N2E2_3962	0.29	+1.9
4,604,307	-		Pf6N2E2_3962	0.29	-0.7
4,604,311	-		Pf6N2E2_3962	0.29	+1.3
4,604,311	-		Pf6N2E2_3962	0.29	+0.7
4,604,311	-		Pf6N2E2_3962	0.29	+0.6
4,604,311	-		Pf6N2E2_3962	0.29	+0.4
4,604,421	+		Pf6N2E2_3962	0.31	-1.1
4,604,422	-		Pf6N2E2_3962	0.31	+1.5
4,604,566	-		Pf6N2E2_3962	0.33	-0.8
4,604,612	+		Pf6N2E2_3962	0.33	+2.2
4,604,612	+		Pf6N2E2_3962	0.33	+0.4
4,604,612	+		Pf6N2E2_3962	0.33	+0.8
4,604,612	+		Pf6N2E2_3962	0.33	+1.1
4,604,612	+		Pf6N2E2_3962	0.33	+0.3
4,604,612	+		Pf6N2E2_3962	0.33	+0.5
4,604,739	+		Pf6N2E2_3962	0.35	+2.4
4,604,740	-		Pf6N2E2_3962	0.35	-0.8
4,604,740	-		Pf6N2E2_3962	0.35	+0.9
4,604,918	+		Pf6N2E2_3962	0.37	+0.8
4,604,918	+		Pf6N2E2_3962	0.37	-1.1
4,604,918	+		Pf6N2E2_3962	0.37	-0.2
4,604,918	+		Pf6N2E2_3962	0.37	+0.3
4,604,918	+		Pf6N2E2_3962	0.37	-1.8
4,604,919	-		Pf6N2E2_3962	0.37	+0.9
4,604,919	-		Pf6N2E2_3962	0.37	-0.3
4,604,919	-		Pf6N2E2_3962	0.37	-0.1
4,604,919	-		Pf6N2E2_3962	0.37	+0.6
4,604,919	-		Pf6N2E2_3962	0.37	+1.6
4,604,919	-		Pf6N2E2_3962	0.37	+0.7
4,604,919	-		Pf6N2E2_3962	0.37	-1.3
4,604,919	-		Pf6N2E2_3962	0.37	+0.7
4,604,919	-		Pf6N2E2_3962	0.37	+0.5
4,604,919	-		Pf6N2E2_3962	0.37	+0.3
4,605,000	+		Pf6N2E2_3962	0.39	-0.1
4,605,000	+		Pf6N2E2_3962	0.39	+0.2
4,605,045	+		Pf6N2E2_3962	0.39	+0.4
4,605,045	+		Pf6N2E2_3962	0.39	-1.3
4,605,045	+		Pf6N2E2_3962	0.39	+1.5
4,605,046	-		Pf6N2E2_3962	0.39	+0.6
4,605,046	-		Pf6N2E2_3962	0.39	-1.5
4,605,046	-		Pf6N2E2_3962	0.39	-0.1
4,605,060	+		Pf6N2E2_3962	0.39	+1.4
4,605,135	+		Pf6N2E2_3962	0.40	+1.5
4,605,136	-		Pf6N2E2_3962	0.40	+1.5
4,605,221	+		Pf6N2E2_3962	0.42	-0.0
4,605,221	+		Pf6N2E2_3962	0.42	+2.2
4,605,222	-		Pf6N2E2_3962	0.42	-2.2
4,605,222	-		Pf6N2E2_3962	0.42	-0.4
4,605,222	-		Pf6N2E2_3962	0.42	-0.4
4,605,222	-		Pf6N2E2_3962	0.42	+0.2
4,605,222	-		Pf6N2E2_3962	0.42	-1.1
4,605,225	+		Pf6N2E2_3962	0.42	+1.5
4,605,226	-		Pf6N2E2_3962	0.42	+0.0
4,605,477	+		Pf6N2E2_3962	0.45	+0.0
4,605,527	+		Pf6N2E2_3962	0.46	-1.2
4,605,528	-		Pf6N2E2_3962	0.46	-1.5
4,605,528	-		Pf6N2E2_3962	0.46	-0.1
4,605,528	-		Pf6N2E2_3962	0.46	+0.7
4,605,747	+		Pf6N2E2_3962	0.49	+0.8
4,605,747	+		Pf6N2E2_3962	0.49	-0.2
4,605,747	+		Pf6N2E2_3962	0.49	+0.4
4,605,747	+		Pf6N2E2_3962	0.49	+0.2
4,605,748	-		Pf6N2E2_3962	0.49	+2.1
4,605,748	-		Pf6N2E2_3962	0.49	-2.2
4,605,748	-		Pf6N2E2_3962	0.49	+0.7
4,605,748	-		Pf6N2E2_3962	0.49	-1.5
4,605,748	-		Pf6N2E2_3962	0.49	+0.2
4,605,748	-		Pf6N2E2_3962	0.49	+1.1
4,605,833	+		Pf6N2E2_3962	0.50	+0.6
4,605,834	-		Pf6N2E2_3962	0.50	-0.5
4,605,834	-		Pf6N2E2_3962	0.50	+0.4
4,605,834	-		Pf6N2E2_3962	0.50	+0.4
4,605,834	-		Pf6N2E2_3962	0.50	+1.5
4,605,834	-		Pf6N2E2_3962	0.50	-0.8
4,605,880	+		Pf6N2E2_3962	0.51	-0.1
4,605,880	+		Pf6N2E2_3962	0.51	+0.6
4,605,880	+		Pf6N2E2_3962	0.51	-0.2
4,605,881	-		Pf6N2E2_3962	0.51	+0.7
4,605,881	-		Pf6N2E2_3962	0.51	+1.7
4,605,894	+		Pf6N2E2_3962	0.51	+0.5
4,605,894	+		Pf6N2E2_3962	0.51	+0.6
4,605,956	+		Pf6N2E2_3962	0.52	+1.2
4,605,957	-		Pf6N2E2_3962	0.52	+1.5
4,605,957	-		Pf6N2E2_3962	0.52	+0.6
4,605,957	-		Pf6N2E2_3962	0.52	-0.1
4,605,994	-		Pf6N2E2_3962	0.52	-0.8
4,606,136	+		Pf6N2E2_3962	0.54	+0.6
4,606,136	+		Pf6N2E2_3962	0.54	+0.7
4,606,137	-		Pf6N2E2_3962	0.54	-0.1
4,606,137	-		Pf6N2E2_3962	0.54	-1.7
4,606,155	+		Pf6N2E2_3962	0.55	-0.1
4,606,442	+		Pf6N2E2_3962	0.58	-0.4
4,606,442	+		Pf6N2E2_3962	0.58	+0.9
4,606,442	+		Pf6N2E2_3962	0.58	+1.3
4,606,442	+		Pf6N2E2_3962	0.58	+1.7
4,606,442	+		Pf6N2E2_3962	0.58	+0.8
4,606,442	+		Pf6N2E2_3962	0.58	+2.0
4,606,442	+		Pf6N2E2_3962	0.58	+0.5
4,606,442	+		Pf6N2E2_3962	0.58	-1.6
4,606,442	+		Pf6N2E2_3962	0.58	+0.1
4,606,442	+		Pf6N2E2_3962	0.58	+0.6
4,606,442	+		Pf6N2E2_3962	0.58	+0.6
4,606,443	-		Pf6N2E2_3962	0.58	-0.5
4,606,443	-		Pf6N2E2_3962	0.58	-0.2
4,606,443	-		Pf6N2E2_3962	0.58	+0.4
4,606,443	-		Pf6N2E2_3962	0.58	-2.5
4,606,443	-		Pf6N2E2_3962	0.58	+1.2
4,606,443	-		Pf6N2E2_3962	0.58	-0.6
4,606,443	-		Pf6N2E2_3962	0.58	-0.1
4,606,443	-		Pf6N2E2_3962	0.58	+0.0
4,606,443	-		Pf6N2E2_3962	0.58	+1.0
4,606,443	-		Pf6N2E2_3962	0.58	+0.6
4,606,443	-		Pf6N2E2_3962	0.58	+0.3
4,606,443	-		Pf6N2E2_3962	0.58	-0.3
4,606,443	-		Pf6N2E2_3962	0.58	+0.4
4,606,443	-		Pf6N2E2_3962	0.58	-2.2
4,606,592	-		Pf6N2E2_3962	0.61	-1.5
4,606,600	-		Pf6N2E2_3962	0.61	+0.4
4,606,662	+		Pf6N2E2_3962	0.62	+0.5
4,606,748	+		Pf6N2E2_3962	0.63	-0.3
4,606,749	-		Pf6N2E2_3962	0.63	+2.1
4,606,749	-		Pf6N2E2_3962	0.63	+0.9
4,606,749	-		Pf6N2E2_3962	0.63	+0.5
4,606,749	-		Pf6N2E2_3962	0.63	-1.8
4,606,749	-		Pf6N2E2_3962	0.63	+0.2
4,606,833	+		Pf6N2E2_3962	0.64	+1.1
4,606,878	+		Pf6N2E2_3962	0.64	+0.3
4,607,054	+		Pf6N2E2_3962	0.67	+0.4
4,607,054	+		Pf6N2E2_3962	0.67	-0.3
4,607,054	+		Pf6N2E2_3962	0.67	-0.5
4,607,055	-		Pf6N2E2_3962	0.67	-0.5
4,607,363	+		Pf6N2E2_3962	0.71	-0.3
4,607,364	-		Pf6N2E2_3962	0.71	+1.9
4,607,364	-		Pf6N2E2_3962	0.71	-1.7
4,607,364	-		Pf6N2E2_3962	0.71	+0.4
4,607,537	-		Pf6N2E2_3962	0.74	-0.3
4,607,629	+		Pf6N2E2_3962	0.75	-0.0
4,607,669	+		Pf6N2E2_3962	0.75	+0.1
4,607,669	+		Pf6N2E2_3962	0.75	-0.1
4,607,669	+		Pf6N2E2_3962	0.75	-0.5
4,607,669	+		Pf6N2E2_3962	0.75	+1.5
4,607,669	+		Pf6N2E2_3962	0.75	-1.3
4,607,670	-		Pf6N2E2_3962	0.75	+2.1
4,607,670	-		Pf6N2E2_3962	0.75	-0.2
4,607,699	+		Pf6N2E2_3962	0.76	+0.8
4,607,700	-		Pf6N2E2_3962	0.76	+0.8
4,607,700	-		Pf6N2E2_3962	0.76	+0.7
4,607,725	-		Pf6N2E2_3962	0.76	+0.2
4,607,725	-		Pf6N2E2_3962	0.76	+0.4
4,607,832	+		Pf6N2E2_3962	0.78	+1.1
4,607,833	-		Pf6N2E2_3962	0.78	-0.6
4,607,833	-		Pf6N2E2_3962	0.78	+1.5
4,607,833	-		Pf6N2E2_3962	0.78	+1.0
4,607,975	+		Pf6N2E2_3962	0.80	+0.8
4,607,975	+		Pf6N2E2_3962	0.80	+0.0
4,607,975	+		Pf6N2E2_3962	0.80	+0.1
4,607,976	-		Pf6N2E2_3962	0.80	-0.5
4,607,976	-		Pf6N2E2_3962	0.80	-1.1
4,607,976	-		Pf6N2E2_3962	0.80	-2.4
4,607,976	-		Pf6N2E2_3962	0.80	+0.5
4,608,020	+		Pf6N2E2_3962	0.80	+1.5
4,608,020	+		Pf6N2E2_3962	0.80	+0.1
4,608,021	-		Pf6N2E2_3962	0.80	-1.5
4,608,021	-		Pf6N2E2_3962	0.80	-1.4
4,608,284	+		Pf6N2E2_3962	0.84	+0.0
4,608,285	-		Pf6N2E2_3962	0.84	+1.1
4,608,285	-		Pf6N2E2_3962	0.84	-0.6
4,608,911	+				+0.7
4,608,912	-				+0.4
4,608,998	+				+0.8
4,608,998	+				+0.5
4,608,998	+				-0.5
4,608,998	+				-0.7
4,608,999	-				-0.8
4,608,999	-				+0.5
4,608,999	-				+0.4
4,609,030	-				+2.2
4,609,123	+				+0.1
4,609,124	-				-0.5
4,609,124	-				+0.3
4,609,124	-				-2.1
4,609,694	-		Pf6N2E2_3963	0.23	+0.0
4,609,694	-		Pf6N2E2_3963	0.23	+1.5
4,609,744	+		Pf6N2E2_3963	0.29	+0.9
4,609,744	+		Pf6N2E2_3963	0.29	+0.2
4,609,789	+		Pf6N2E2_3963	0.35	+0.5
4,609,789	+		Pf6N2E2_3963	0.35	+1.9
4,609,828	+		Pf6N2E2_3963	0.39	+0.0
4,609,828	+		Pf6N2E2_3963	0.39	+2.3
4,609,828	+		Pf6N2E2_3963	0.39	+0.5
4,609,829	-		Pf6N2E2_3963	0.39	+0.5
4,609,829	-		Pf6N2E2_3963	0.39	+1.8
4,609,829	-		Pf6N2E2_3963	0.39	+1.2
4,609,829	-		Pf6N2E2_3963	0.39	+0.5
4,609,829	-		Pf6N2E2_3963	0.39	+0.5
4,609,900	+		Pf6N2E2_3963	0.48	-0.1
4,609,900	+		Pf6N2E2_3963	0.48	+1.0
4,609,901	-		Pf6N2E2_3963	0.48	-0.3
4,610,113	+		Pf6N2E2_3963	0.73	-2.0
4,610,116	+		Pf6N2E2_3963	0.73	+1.6
4,610,116	+		Pf6N2E2_3963	0.73	-0.3
4,610,117	-		Pf6N2E2_3963	0.73	+1.5
4,610,117	-		Pf6N2E2_3963	0.73	+0.3
4,610,117	-		Pf6N2E2_3963	0.73	+0.6
4,610,117	-		Pf6N2E2_3963	0.73	+1.5
4,610,117	-		Pf6N2E2_3963	0.73	+1.5
4,610,315	+				-1.8
4,610,316	-				-0.2
4,610,316	-				-1.3
4,610,316	-				-0.5
4,610,350	+				+0.4