Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22735

Experiment: trans-aconitic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	trans-aconitic 5 mM (C)
5,119,303	+				-0.2
5,119,303	+				+2.1
5,119,304	-				+0.4
5,119,308	+				+0.0
5,119,308	+				+0.2
5,119,308	+				-1.8
5,119,308	+				+0.9
5,119,308	+				+0.6
5,119,308	+				-1.3
5,119,308	+				+0.5
5,119,308	+				-0.4
5,119,308	+				+0.6
5,119,308	+				+0.8
5,119,308	+				+0.5
5,119,308	+				-0.8
5,119,309	-				+0.2
5,119,309	-				-0.0
5,119,309	-				+0.5
5,119,309	-				+0.2
5,119,309	-				+0.3
5,119,309	-				+0.1
5,119,309	-				-0.7
5,119,309	-				+0.1
5,119,309	-				-0.4
5,119,309	-				-0.7
5,119,309	-				-0.4
5,119,309	-				-1.3
5,119,309	-				+0.5
5,119,309	-				+0.2
5,119,309	-				+1.0
5,119,309	-				-0.0
5,119,339	+				-0.2
5,119,339	+				-1.3
5,119,339	+				-1.0
5,119,339	+				-2.4
5,119,339	+				-1.2
5,119,340	-				+0.4
5,119,340	-				-0.8
5,119,366	+				-1.2
5,119,366	+				+0.7
5,119,366	+				-1.9
5,119,366	+				-1.3
5,119,366	+				-0.5
5,119,366	+				-1.4
5,119,366	+				-1.1
5,119,366	+				+0.6
5,119,366	+				-1.4
5,119,366	+				-1.2
5,119,366	+				-1.4
5,119,366	+				-0.2
5,119,366	+				-1.4
5,119,366	+				-2.1
5,119,366	+				-1.6
5,119,367	-				-1.1
5,119,367	-				-1.8
5,119,367	-				-2.0
5,119,367	-				-2.0
5,119,367	-				-1.4
5,119,367	-				-2.6
5,119,367	-				-2.4
5,119,367	-				-1.8
5,119,367	-				-0.8
5,119,367	-				+0.2
5,119,367	-				-0.7
5,119,367	-				-1.2
5,119,464	+		PFLU_RS22735	0.25	-1.1
5,119,464	+		PFLU_RS22735	0.25	+0.2
5,119,465	-		PFLU_RS22735	0.26	-1.6
5,119,465	-		PFLU_RS22735	0.26	-1.4
5,119,465	-		PFLU_RS22735	0.26	-0.5
5,119,465	-		PFLU_RS22735	0.26	-0.1
5,119,491	+		PFLU_RS22735	0.30	-0.4
5,119,491	+		PFLU_RS22735	0.30	-0.4
5,119,491	+		PFLU_RS22735	0.30	-2.0
5,119,491	+		PFLU_RS22735	0.30	-1.7
5,119,492	-		PFLU_RS22735	0.30	-0.4
5,119,494	+		PFLU_RS22735	0.30	-0.3
5,119,494	+		PFLU_RS22735	0.30	-2.4
5,119,494	+		PFLU_RS22735	0.30	+0.2
5,119,494	+		PFLU_RS22735	0.30	+1.2
5,119,494	+		PFLU_RS22735	0.30	+0.2
5,119,495	-		PFLU_RS22735	0.30	-0.5
5,119,495	-		PFLU_RS22735	0.30	-0.5
5,119,495	-		PFLU_RS22735	0.30	-1.4
5,119,495	-		PFLU_RS22735	0.30	-1.4
5,119,495	-		PFLU_RS22735	0.30	-0.4
5,119,495	-		PFLU_RS22735	0.30	-0.2
5,119,514	+		PFLU_RS22735	0.33	-1.2
5,119,551	+		PFLU_RS22735	0.39	-2.2
5,119,551	+		PFLU_RS22735	0.39	-0.7
5,119,551	+		PFLU_RS22735	0.39	-0.2
5,119,551	+		PFLU_RS22735	0.39	-0.9
5,119,551	+		PFLU_RS22735	0.39	-1.6
5,119,552	-		PFLU_RS22735	0.40	-0.9
5,119,552	-		PFLU_RS22735	0.40	-2.2
5,119,645	-		PFLU_RS22735	0.55	-1.4
5,119,645	-		PFLU_RS22735	0.55	+0.2
5,119,802	+		PFLU_RS22735	0.80	-0.8
5,119,802	+		PFLU_RS22735	0.80	-1.0
5,119,802	+		PFLU_RS22735	0.80	-1.0
5,119,802	+		PFLU_RS22735	0.80	-2.7
5,119,802	+		PFLU_RS22735	0.80	-0.5
5,119,802	+		PFLU_RS22735	0.80	-1.4
5,119,802	+		PFLU_RS22735	0.80	-0.1
5,119,802	+		PFLU_RS22735	0.80	-1.1
5,119,802	+		PFLU_RS22735	0.80	-0.4
5,119,802	+		PFLU_RS22735	0.80	-1.1
5,119,802	+		PFLU_RS22735	0.80	-0.5
5,119,803	-		PFLU_RS22735	0.80	+0.7
5,119,803	-		PFLU_RS22735	0.80	+2.2
5,119,803	-		PFLU_RS22735	0.80	+1.2
5,119,803	-		PFLU_RS22735	0.80	-2.0
5,119,803	-		PFLU_RS22735	0.80	-1.0
5,119,803	-		PFLU_RS22735	0.80	-1.3
5,119,803	-		PFLU_RS22735	0.80	-2.0
5,119,803	-		PFLU_RS22735	0.80	-0.5
5,119,803	-		PFLU_RS22735	0.80	+0.1
5,119,803	-		PFLU_RS22735	0.80	-0.8
5,119,803	-		PFLU_RS22735	0.80	-1.4
5,119,803	-		PFLU_RS22735	0.80	-1.5
5,119,803	-		PFLU_RS22735	0.80	-1.2
5,119,810	-		PFLU_RS22735	0.81	+0.2
5,119,829	-		PFLU_RS22735	0.84	-2.4
5,119,831	+		PFLU_RS22735	0.85	-2.2
5,119,831	+		PFLU_RS22735	0.85	-1.0
5,119,831	+		PFLU_RS22735	0.85	-1.1
5,119,832	-		PFLU_RS22735	0.85	+0.1
5,119,832	-		PFLU_RS22735	0.85	-1.4
5,119,980	-				+0.4
5,120,013	+				+1.2
5,120,014	-				+0.7
5,120,014	-				+0.6
5,120,014	-				+0.6
5,120,014	-				+0.7
5,120,022	-				+0.5
5,120,035	+				+1.2
5,120,036	-				-1.6
5,120,037	+				+1.0
5,120,037	+				+0.1
5,120,037	+				+1.2
5,120,037	+				+0.8
5,120,038	-				-1.1
5,120,038	-				+0.2
5,120,038	-				-1.8
5,120,038	-				-0.8
5,120,038	-				-2.5
5,120,038	-				-1.6
5,120,038	-				-2.0
5,120,038	-				-2.0
5,120,038	-				-1.6
5,120,038	-				-0.4
5,120,062	+				-1.1
5,120,116	-				+0.6
5,120,116	-				-0.8
5,120,116	-				+0.2
5,120,289	+		PFLU_RS22740	0.29	-1.1
5,120,290	-		PFLU_RS22740	0.29	-1.1
5,120,319	+		PFLU_RS22740	0.33	-2.4
5,120,319	+		PFLU_RS22740	0.33	-1.4
5,120,320	-		PFLU_RS22740	0.33	-2.4
5,120,320	-		PFLU_RS22740	0.33	-1.1
5,120,320	-		PFLU_RS22740	0.33	-0.4
5,120,320	-		PFLU_RS22740	0.33	-1.6
5,120,320	-		PFLU_RS22740	0.33	-1.1
5,120,400	+		PFLU_RS22740	0.44	-2.0
5,120,400	+		PFLU_RS22740	0.44	+0.2
5,120,401	-		PFLU_RS22740	0.44	+0.2
5,120,401	-		PFLU_RS22740	0.44	+1.2
5,120,570	+		PFLU_RS22740	0.67	-0.8
5,120,570	+		PFLU_RS22740	0.67	-2.2
5,120,570	+		PFLU_RS22740	0.67	-0.8
5,120,570	+		PFLU_RS22740	0.67	-0.4
5,120,570	+		PFLU_RS22740	0.67	-1.4
5,120,571	-		PFLU_RS22740	0.67	-1.1
5,120,571	-		PFLU_RS22740	0.67	-0.8
5,120,571	-		PFLU_RS22740	0.67	-1.4
5,120,577	+		PFLU_RS22740	0.68	-1.8
5,120,577	+		PFLU_RS22740	0.68	-1.8
5,120,625	+		PFLU_RS22740	0.75	-1.4
5,120,625	+		PFLU_RS22740	0.75	-0.8
5,120,626	-		PFLU_RS22740	0.75	-1.1
5,120,626	-		PFLU_RS22740	0.75	-1.1
5,120,626	-		PFLU_RS22740	0.75	+0.6
5,120,649	+		PFLU_RS22740	0.78	-1.4
5,120,649	+		PFLU_RS22740	0.78	-1.4
5,120,649	+		PFLU_RS22740	0.78	-0.1
5,120,650	-		PFLU_RS22740	0.78	+0.6
5,120,650	-		PFLU_RS22740	0.78	-0.4
5,120,650	-		PFLU_RS22740	0.78	-1.8
5,120,676	-		PFLU_RS22740	0.82	-0.8
5,120,792	+				-0.3
5,120,792	+				+1.2
5,120,793	-				-1.1
5,120,793	-				-0.3
5,120,793	-				-1.5
5,120,793	-				-0.1
5,120,793	-				+0.2
5,120,793	-				-1.1
5,120,793	-				-0.4
5,120,808	+				+0.0
5,120,808	+				+0.4
5,120,808	+				-0.6
5,120,808	+				-0.1
5,120,808	+				-1.5
5,120,808	+				-0.5
5,120,808	+				+1.8
5,120,809	-				-0.9
5,120,809	-				-0.1
5,120,809	-				+0.4
5,120,809	-				+0.6
5,120,809	-				-0.2
5,120,886	+				-0.3
5,120,887	-				-0.5
5,120,898	+				-0.7
5,120,898	+				-0.8
5,120,899	-				-1.6
5,120,915	+				+0.9
5,120,915	+				+0.9
5,120,916	-				+0.5
5,120,916	-				+0.5