Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21820

Experiment: trans-aconitic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	trans-aconitic 5 mM (C)
4,910,535	+		PFLU_RS21810	0.66	-1.1
4,910,581	-		PFLU_RS21810	0.69	-3.0
4,910,581	-		PFLU_RS21810	0.69	-1.4
4,910,581	-		PFLU_RS21810	0.69	-1.2
4,910,591	+		PFLU_RS21810	0.70	-1.4
4,910,591	+		PFLU_RS21810	0.70	-0.0
4,910,591	+		PFLU_RS21810	0.70	-0.8
4,910,591	+		PFLU_RS21810	0.70	-1.3
4,910,591	+		PFLU_RS21810	0.70	+0.6
4,910,591	+		PFLU_RS21810	0.70	-3.4
4,910,591	+		PFLU_RS21810	0.70	-1.7
4,910,591	+		PFLU_RS21810	0.70	-2.1
4,910,592	-		PFLU_RS21810	0.70	-1.4
4,910,592	-		PFLU_RS21810	0.70	-1.7
4,910,592	-		PFLU_RS21810	0.70	-2.4
4,910,592	-		PFLU_RS21810	0.70	-0.7
4,910,592	-		PFLU_RS21810	0.70	-0.4
4,910,592	-		PFLU_RS21810	0.70	-0.4
4,910,652	+		PFLU_RS21810	0.74	-1.8
4,910,652	+		PFLU_RS21810	0.74	-1.4
4,910,652	+		PFLU_RS21810	0.74	-1.0
4,910,652	+		PFLU_RS21810	0.74	-2.7
4,910,652	+		PFLU_RS21810	0.74	-0.8
4,910,653	-		PFLU_RS21810	0.74	-1.4
4,910,653	-		PFLU_RS21810	0.74	-1.2
4,910,653	-		PFLU_RS21810	0.74	-3.3
4,910,653	-		PFLU_RS21810	0.74	-1.6
4,910,727	+		PFLU_RS21810	0.80	-1.3
4,910,727	+		PFLU_RS21810	0.80	-2.6
4,910,727	+		PFLU_RS21810	0.80	-0.7
4,910,728	-		PFLU_RS21810	0.80	-0.8
4,910,728	-		PFLU_RS21810	0.80	+0.8
4,910,728	-		PFLU_RS21810	0.80	-1.3
4,910,728	-		PFLU_RS21810	0.80	-0.8
4,910,728	-		PFLU_RS21810	0.80	-0.4
4,910,745	+		PFLU_RS21810	0.81	-3.3
4,910,745	+		PFLU_RS21810	0.81	-3.7
4,910,746	-		PFLU_RS21810	0.81	-2.6
4,910,820	+		PFLU_RS21810	0.86	-0.4
4,910,820	+		PFLU_RS21810	0.86	-0.6
4,910,820	+		PFLU_RS21810	0.86	-3.2
4,910,820	+		PFLU_RS21810	0.86	-2.4
4,910,820	+		PFLU_RS21810	0.86	-0.8
4,910,820	+		PFLU_RS21810	0.86	-1.4
4,910,820	+		PFLU_RS21810	0.86	-2.7
4,910,820	+		PFLU_RS21810	0.86	-1.3
4,910,820	+		PFLU_RS21810	0.86	-0.8
4,910,820	+		PFLU_RS21810	0.86	-3.3
4,910,820	+		PFLU_RS21810	0.86	-2.0
4,910,820	+		PFLU_RS21810	0.86	-1.1
4,910,821	-		PFLU_RS21810	0.86	-0.8
4,910,821	-		PFLU_RS21810	0.86	-2.3
4,910,821	-		PFLU_RS21810	0.86	-2.3
4,910,821	-		PFLU_RS21810	0.86	-1.1
4,910,821	-		PFLU_RS21810	0.86	-1.6
4,910,821	-		PFLU_RS21810	0.86	-2.0
4,910,865	+		PFLU_RS21810	0.89	+0.6
4,910,865	+		PFLU_RS21810	0.89	-2.0
4,910,865	+		PFLU_RS21810	0.89	-1.7
4,910,865	+		PFLU_RS21810	0.89	-1.7
4,910,865	+		PFLU_RS21810	0.89	-1.4
4,910,865	+		PFLU_RS21810	0.89	-0.6
4,910,865	+		PFLU_RS21810	0.89	-1.8
4,910,866	-		PFLU_RS21810	0.90	-2.1
4,910,866	-		PFLU_RS21810	0.90	-1.6
4,910,866	-		PFLU_RS21810	0.90	+1.2
4,910,866	-		PFLU_RS21810	0.90	+0.2
4,910,866	-		PFLU_RS21810	0.90	-2.1
4,910,866	-		PFLU_RS21810	0.90	-0.1
4,910,866	-		PFLU_RS21810	0.90	-0.9
4,910,866	-		PFLU_RS21810	0.90	-0.4
4,910,866	-		PFLU_RS21810	0.90	-0.4
4,910,869	+		PFLU_RS21810	0.90	-0.9
4,910,869	+		PFLU_RS21810	0.90	-0.9
4,910,870	-		PFLU_RS21810	0.90	-3.7
4,910,870	-		PFLU_RS21810	0.90	-2.4
4,910,870	-		PFLU_RS21810	0.90	-0.4
4,910,870	-		PFLU_RS21810	0.90	-0.1
4,910,870	-		PFLU_RS21810	0.90	-1.9
4,910,907	+				-2.1
4,910,995	+				-1.3
4,910,995	+				-2.0
4,910,996	-				-2.1
4,910,996	-				-2.9
4,910,996	-				-1.1
4,910,996	-				-2.0
4,910,996	-				-1.9
4,910,996	-				+0.1
4,910,996	-				-1.7
4,910,996	-				-1.3
4,910,996	-				-1.5
4,910,996	-				-1.6
4,911,042	+				-0.5
4,911,255	+		PFLU_RS21815	0.46	+1.2
4,911,255	+		PFLU_RS21815	0.46	+0.1
4,911,255	+		PFLU_RS21815	0.46	+0.1
4,911,255	+		PFLU_RS21815	0.46	+0.2
4,911,256	-		PFLU_RS21815	0.46	+0.8
4,911,256	-		PFLU_RS21815	0.46	+0.8
4,911,256	-		PFLU_RS21815	0.46	-1.2
4,911,333	+		PFLU_RS21815	0.68	+1.2
4,911,355	-		PFLU_RS21815	0.74	-0.2
4,911,355	-		PFLU_RS21815	0.74	+0.1
4,911,367	-		PFLU_RS21815	0.78	+0.2
4,911,414	-				+0.9
4,911,430	+				-0.8
4,911,430	+				+0.0
4,911,431	-				+0.6
4,911,431	-				+0.4
4,911,458	+				-0.4
4,911,458	+				-0.6
4,911,459	-				-0.1
4,911,499	+				-0.7
4,911,519	+				-0.9
4,911,519	+				-2.0
4,911,520	-				+0.5
4,911,520	-				+0.8
4,911,536	+				-0.4
4,911,537	-				-1.4
4,911,537	-				-1.0
4,911,556	+				-1.1
4,911,703	+		PFLU_RS21820	0.13	-0.6
4,911,704	-		PFLU_RS21820	0.13	-0.8
4,911,774	-		PFLU_RS21820	0.18	-1.1
4,911,774	-		PFLU_RS21820	0.18	-0.3
4,911,809	+		PFLU_RS21820	0.20	-1.5
4,911,809	+		PFLU_RS21820	0.20	-0.5
4,911,809	+		PFLU_RS21820	0.20	-0.4
4,911,810	-		PFLU_RS21820	0.20	-3.0
4,911,810	-		PFLU_RS21820	0.20	-1.4
4,911,810	-		PFLU_RS21820	0.20	-0.8
4,911,810	-		PFLU_RS21820	0.20	-1.1
4,911,810	-		PFLU_RS21820	0.20	-1.1
4,911,880	+		PFLU_RS21820	0.25	-2.7
4,911,880	+		PFLU_RS21820	0.25	-2.0
4,911,880	+		PFLU_RS21820	0.25	-1.0
4,911,881	-		PFLU_RS21820	0.25	-1.5
4,911,881	-		PFLU_RS21820	0.25	-1.6
4,911,906	+		PFLU_RS21820	0.27	-1.8
4,911,906	+		PFLU_RS21820	0.27	-1.4
4,911,907	-		PFLU_RS21820	0.27	-1.4
4,911,907	-		PFLU_RS21820	0.27	-0.9
4,911,907	-		PFLU_RS21820	0.27	-1.2
4,911,907	-		PFLU_RS21820	0.27	-0.6
4,911,979	+		PFLU_RS21820	0.32	-0.0
4,911,979	+		PFLU_RS21820	0.32	-0.5
4,911,980	-		PFLU_RS21820	0.32	-1.4
4,911,980	-		PFLU_RS21820	0.32	-1.3
4,911,980	-		PFLU_RS21820	0.32	-1.0
4,911,980	-		PFLU_RS21820	0.32	-2.4
4,911,993	+		PFLU_RS21820	0.33	-0.1
4,911,993	+		PFLU_RS21820	0.33	+0.2
4,911,993	+		PFLU_RS21820	0.33	-2.3
4,911,994	-		PFLU_RS21820	0.33	-2.1
4,911,994	-		PFLU_RS21820	0.33	-1.2
4,911,994	-		PFLU_RS21820	0.33	-1.1
4,912,021	+		PFLU_RS21820	0.34	+0.5
4,912,021	+		PFLU_RS21820	0.34	+0.2
4,912,022	-		PFLU_RS21820	0.35	-3.2
4,912,102	+		PFLU_RS21820	0.40	-0.0
4,912,102	+		PFLU_RS21820	0.40	+0.2
4,912,102	+		PFLU_RS21820	0.40	-1.2
4,912,103	-		PFLU_RS21820	0.40	-0.8
4,912,103	-		PFLU_RS21820	0.40	-0.9
4,912,103	-		PFLU_RS21820	0.40	-2.0
4,912,113	+		PFLU_RS21820	0.41	-0.1
4,912,113	+		PFLU_RS21820	0.41	-0.4
4,912,113	+		PFLU_RS21820	0.41	-0.8
4,912,114	-		PFLU_RS21820	0.41	-0.2
4,912,114	-		PFLU_RS21820	0.41	+1.2
4,912,114	-		PFLU_RS21820	0.41	-0.6
4,912,114	-		PFLU_RS21820	0.41	+0.2
4,912,114	-		PFLU_RS21820	0.41	-0.9
4,912,114	-		PFLU_RS21820	0.41	-2.1
4,912,114	-		PFLU_RS21820	0.41	+0.5
4,912,114	-		PFLU_RS21820	0.41	-2.3
4,912,114	-		PFLU_RS21820	0.41	-0.8
4,912,144	+		PFLU_RS21820	0.43	-0.5
4,912,144	+		PFLU_RS21820	0.43	-1.9
4,912,145	-		PFLU_RS21820	0.43	+0.2
4,912,182	-		PFLU_RS21820	0.46	-0.4
4,912,182	-		PFLU_RS21820	0.46	-1.4
4,912,182	-		PFLU_RS21820	0.46	-1.5
4,912,182	-		PFLU_RS21820	0.46	-0.8
4,912,195	+		PFLU_RS21820	0.46	-0.8
4,912,196	-		PFLU_RS21820	0.47	-0.1
4,912,196	-		PFLU_RS21820	0.47	-0.9
4,912,269	-		PFLU_RS21820	0.52	-1.6
4,912,269	-		PFLU_RS21820	0.52	+0.3
4,912,364	-		PFLU_RS21820	0.58	-0.6
4,912,445	+		PFLU_RS21820	0.64	-0.9
4,912,446	-		PFLU_RS21820	0.64	-1.3
4,912,446	-		PFLU_RS21820	0.64	-0.6
4,912,472	-		PFLU_RS21820	0.65	-2.0
4,912,546	+		PFLU_RS21820	0.71	-1.3
4,912,551	+		PFLU_RS21820	0.71	+1.4
4,912,585	+		PFLU_RS21820	0.73	-2.6
4,912,600	+		PFLU_RS21820	0.74	-0.5
4,912,600	+		PFLU_RS21820	0.74	-1.5
4,912,600	+		PFLU_RS21820	0.74	+0.0
4,912,601	-		PFLU_RS21820	0.74	-1.4
4,912,629	+		PFLU_RS21820	0.76	+0.2
4,912,629	+		PFLU_RS21820	0.76	-0.7
4,912,629	+		PFLU_RS21820	0.76	+0.2
4,912,630	-		PFLU_RS21820	0.76	-1.4
4,912,648	+		PFLU_RS21820	0.78	-1.5
4,912,648	+		PFLU_RS21820	0.78	+0.9
4,912,648	+		PFLU_RS21820	0.78	-1.9
4,912,648	+		PFLU_RS21820	0.78	-2.0
4,912,648	+		PFLU_RS21820	0.78	-1.3
4,912,648	+		PFLU_RS21820	0.78	-0.9
4,912,648	+		PFLU_RS21820	0.78	-1.0
4,912,648	+		PFLU_RS21820	0.78	-1.1
4,912,649	-		PFLU_RS21820	0.78	-2.0
4,912,649	-		PFLU_RS21820	0.78	-2.4
4,912,649	-		PFLU_RS21820	0.78	-3.1
4,912,649	-		PFLU_RS21820	0.78	-1.0
4,912,697	-		PFLU_RS21820	0.81	-2.8
4,912,762	+		PFLU_RS21820	0.85	-2.8
4,912,762	+		PFLU_RS21820	0.85	-0.7
4,912,763	-		PFLU_RS21820	0.85	-1.4
4,912,763	-		PFLU_RS21820	0.85	-0.4
4,912,852	+				-0.1
4,912,891	+				-1.7
4,912,891	+				-1.4
4,912,891	+				-1.4
4,912,891	+				-0.9
4,912,891	+				-1.1
4,912,891	+				-0.5
4,912,891	+				-2.4
4,912,891	+				-1.8
4,912,891	+				-1.2
4,912,891	+				+0.0
4,912,891	+				-0.8
4,912,891	+				-1.4
4,912,891	+				-1.7
4,912,891	+				-2.7
4,912,892	-				-1.3
4,912,892	-				-0.7
4,912,892	-				-1.1
4,912,892	-				-1.0
4,912,892	-				-1.1
4,912,892	-				-1.6
4,912,892	-				-0.6
4,912,892	-				-2.5
4,912,892	-				-0.7
4,912,892	-				-1.5
4,912,892	-				-0.8
4,912,892	-				-1.6
4,912,892	-				-0.6
4,912,892	-				-3.0
4,912,892	-				-1.3
4,912,892	-				+0.2
4,912,892	-				-0.1
4,912,892	-				-2.6
4,912,892	-				-0.6
4,912,892	-				-2.3
4,912,937	-				-1.1
4,912,937	-				-2.0
4,912,961	+				-0.5
4,912,961	+				-1.3
4,912,961	+				-1.1
4,912,961	+				-1.8
4,912,962	-				-2.0
4,912,962	-				-3.0
4,912,962	-				-2.3
4,912,962	-				-1.5
4,912,962	-				-1.6
4,912,962	-				-0.0
4,912,962	-				-1.3
4,912,967	+				-2.7
4,912,967	+				-1.1
4,912,967	+				-1.4
4,912,967	+				-1.0
4,912,968	-				-3.3
4,912,998	+				-1.2
4,913,045	+				-2.0
4,913,045	+				-0.8
4,913,045	+				-1.5
4,913,045	+				-1.1
4,913,045	+				-3.3
4,913,045	+				-1.3
4,913,045	+				-0.4
4,913,045	+				+0.1
4,913,045	+				-1.7
4,913,046	-				-0.7
4,913,046	-				+0.6
4,913,046	-				+2.5
4,913,046	-				-1.3
4,913,046	-				+0.3
4,913,046	-				-0.5
4,913,046	-				-0.0
4,913,046	-				-1.1
4,913,046	-				-1.5
4,913,046	-				+0.4
4,913,046	-				-1.4
4,913,046	-				-2.1
4,913,046	-				-2.2
4,913,049	+				-2.2
4,913,049	+				-0.4
4,913,049	+				-2.1
4,913,049	+				-0.8
4,913,049	+				-2.6
4,913,049	+				-1.9
4,913,049	+				-2.4
4,913,049	+				-1.2
4,913,049	+				-1.3
4,913,049	+				-1.5
4,913,050	-				-1.1
4,913,050	-				-1.2
4,913,050	-				+0.1
4,913,050	-				-0.7
4,913,050	-				-1.6
4,913,050	-				-1.3
4,913,050	-				+0.5
4,913,050	-				-1.2
4,913,052	+				-2.4
4,913,052	+				-0.7
4,913,052	+				-1.0
4,913,052	+				-0.8
4,913,052	+				-1.2
4,913,052	+				-1.7
4,913,052	+				-1.4
4,913,052	+				-1.0
4,913,052	+				-1.1
4,913,052	+				+0.3
4,913,052	+				-2.1
4,913,052	+				-0.9
4,913,052	+				-0.3
4,913,052	+				-0.6
4,913,052	+				-0.2
4,913,053	-				-0.4
4,913,053	-				-3.3
4,913,053	-				+0.4
4,913,053	-				+1.2
4,913,053	-				-0.9
4,913,053	-				-1.8
4,913,053	-				+0.4
4,913,053	-				+0.5
4,913,053	-				-2.6
4,913,053	-				-3.2
4,913,053	-				-1.1
4,913,053	-				-0.7
4,913,053	-				+0.1
4,913,053	-				-2.9
4,913,053	-				+0.4
4,913,053	-				-1.0
4,913,057	-				-1.3
4,913,057	-				-1.2
4,913,057	-				+0.0
4,913,057	-				-2.2
4,913,057	-				-1.4
4,913,137	+				-0.7
4,913,184	-				-0.9
4,913,235	-				+0.5
4,913,532	+		PFLU_RS21825	0.31	-0.8
4,913,537	+		PFLU_RS21825	0.32	+0.2
4,913,537	+		PFLU_RS21825	0.32	-0.8
4,913,537	+		PFLU_RS21825	0.32	+0.0
4,913,537	+		PFLU_RS21825	0.32	-1.3
4,913,538	-		PFLU_RS21825	0.32	-1.4
4,913,538	-		PFLU_RS21825	0.32	+0.2
4,913,538	-		PFLU_RS21825	0.32	+0.2
4,913,538	-		PFLU_RS21825	0.32	-0.2
4,913,538	-		PFLU_RS21825	0.32	-0.2
4,913,573	+		PFLU_RS21825	0.36	-0.4
4,913,573	+		PFLU_RS21825	0.36	+0.2
4,913,573	+		PFLU_RS21825	0.36	-1.1
4,913,574	-		PFLU_RS21825	0.36	-0.4
4,913,574	-		PFLU_RS21825	0.36	-1.4
4,913,597	+		PFLU_RS21825	0.38	-1.6
4,913,597	+		PFLU_RS21825	0.38	-0.4
4,913,598	-		PFLU_RS21825	0.38	-0.2
4,913,598	-		PFLU_RS21825	0.38	-0.6
4,913,598	-		PFLU_RS21825	0.38	+1.2
4,913,598	-		PFLU_RS21825	0.38	-0.8
4,913,598	-		PFLU_RS21825	0.38	-0.5
4,913,598	-		PFLU_RS21825	0.38	-0.0
4,913,598	-		PFLU_RS21825	0.38	-1.2
4,913,598	-		PFLU_RS21825	0.38	-0.4
4,913,806	+		PFLU_RS21825	0.61	-2.4
4,913,806	+		PFLU_RS21825	0.61	-0.2
4,913,806	+		PFLU_RS21825	0.61	+1.5
4,913,806	+		PFLU_RS21825	0.61	-0.5
4,913,806	+		PFLU_RS21825	0.61	-1.1
4,913,806	+		PFLU_RS21825	0.61	-1.4
4,913,806	+		PFLU_RS21825	0.61	+1.2
4,913,806	+		PFLU_RS21825	0.61	+0.4
4,913,806	+		PFLU_RS21825	0.61	-0.6
4,913,806	+		PFLU_RS21825	0.61	+0.4
4,913,806	+		PFLU_RS21825	0.61	-1.1
4,913,807	-		PFLU_RS21825	0.61	-0.1
4,913,807	-		PFLU_RS21825	0.61	+0.6
4,913,807	-		PFLU_RS21825	0.61	-0.2
4,913,807	-		PFLU_RS21825	0.61	-1.6
4,913,807	-		PFLU_RS21825	0.61	-1.2
4,913,807	-		PFLU_RS21825	0.61	-0.1
4,913,807	-		PFLU_RS21825	0.61	-0.8
4,913,807	-		PFLU_RS21825	0.61	-0.0
4,913,807	-		PFLU_RS21825	0.61	+0.2
4,913,807	-		PFLU_RS21825	0.61	-0.3
4,913,807	-		PFLU_RS21825	0.61	-0.4
4,913,807	-		PFLU_RS21825	0.61	+0.5
4,913,807	-		PFLU_RS21825	0.61	-0.2
4,913,807	-		PFLU_RS21825	0.61	-1.7
4,913,807	-		PFLU_RS21825	0.61	+1.2
4,913,807	-		PFLU_RS21825	0.61	+1.2
4,913,807	-		PFLU_RS21825	0.61	-0.2
4,913,815	+		PFLU_RS21825	0.62	-1.8
4,913,815	+		PFLU_RS21825	0.62	-1.3
4,913,815	+		PFLU_RS21825	0.62	+1.2
4,913,815	+		PFLU_RS21825	0.62	-1.6
4,913,815	+		PFLU_RS21825	0.62	-0.6
4,913,815	+		PFLU_RS21825	0.62	-0.4
4,913,815	+		PFLU_RS21825	0.62	-0.4
4,913,815	+		PFLU_RS21825	0.62	+0.5
4,913,815	+		PFLU_RS21825	0.62	+1.7
4,913,816	-		PFLU_RS21825	0.62	+0.6
4,913,816	-		PFLU_RS21825	0.62	-0.4
4,913,816	-		PFLU_RS21825	0.62	+0.2
4,913,816	-		PFLU_RS21825	0.62	+0.0
4,913,816	-		PFLU_RS21825	0.62	-3.0
4,913,816	-		PFLU_RS21825	0.62	-0.7
4,913,816	-		PFLU_RS21825	0.62	-0.8
4,913,816	-		PFLU_RS21825	0.62	-0.5
4,913,816	-		PFLU_RS21825	0.62	+0.2
4,913,816	-		PFLU_RS21825	0.62	-0.4
4,913,821	+		PFLU_RS21825	0.62	-0.1
4,913,821	+		PFLU_RS21825	0.62	-0.2
4,913,821	+		PFLU_RS21825	0.62	-0.0
4,913,822	-		PFLU_RS21825	0.62	-0.6
4,913,822	-		PFLU_RS21825	0.62	+0.2
4,913,822	-		PFLU_RS21825	0.62	-0.1
4,913,843	+		PFLU_RS21825	0.65	+0.6