Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21705

Experiment: trans-aconitic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	trans-aconitic 5 mM (C)
4,889,336	+		PFLU_RS21695	0.87	-2.2
4,889,336	+		PFLU_RS21695	0.87	-1.5
4,889,336	+		PFLU_RS21695	0.87	-1.8
4,889,336	+		PFLU_RS21695	0.87	-1.7
4,889,379	+				-2.3
4,889,512	+				-1.5
4,889,512	+				-2.8
4,889,512	+				-1.1
4,889,512	+				-2.4
4,889,512	+				-2.0
4,889,512	+				-1.5
4,889,512	+				-1.9
4,889,512	+				-1.3
4,889,512	+				-0.8
4,889,512	+				-1.4
4,889,512	+				-0.0
4,889,512	+				-0.6
4,889,512	+				-0.4
4,889,512	+				-1.4
4,889,512	+				-1.5
4,889,512	+				-1.9
4,889,512	+				-1.2
4,889,512	+				-1.7
4,889,512	+				-2.3
4,889,512	+				-1.3
4,889,513	-				-1.3
4,889,513	-				-1.6
4,889,513	-				-0.2
4,889,513	-				-0.9
4,889,513	-				+1.6
4,889,513	-				-0.4
4,889,513	-				-0.8
4,889,513	-				-0.2
4,889,513	-				+0.8
4,889,513	-				-1.6
4,889,513	-				+0.1
4,889,513	-				-0.4
4,889,513	-				-1.8
4,889,513	-				-0.6
4,889,513	-				+0.1
4,889,546	+				-0.5
4,889,547	-				-2.2
4,889,547	-				-1.6
4,889,656	+		PFLU_RS21700	0.21	-1.3
4,889,657	-		PFLU_RS21700	0.22	-2.3
4,889,657	-		PFLU_RS21700	0.22	-2.1
4,889,670	+		PFLU_RS21700	0.23	-2.5
4,889,671	-		PFLU_RS21700	0.23	-3.5
4,889,691	+		PFLU_RS21700	0.26	-3.5
4,889,691	+		PFLU_RS21700	0.26	-1.9
4,890,114	+		PFLU_RS21700	0.80	-2.3
4,890,114	+		PFLU_RS21700	0.80	-2.3
4,890,114	+		PFLU_RS21700	0.80	-4.1
4,890,114	+		PFLU_RS21700	0.80	-2.2
4,890,115	-		PFLU_RS21700	0.80	-2.3
4,890,117	+		PFLU_RS21700	0.80	-2.3
4,890,117	+		PFLU_RS21700	0.80	-3.0
4,890,117	+		PFLU_RS21700	0.80	-1.7
4,890,131	+		PFLU_RS21700	0.82	-2.4
4,890,131	+		PFLU_RS21700	0.82	-2.3
4,890,131	+		PFLU_RS21700	0.82	-2.1
4,890,131	+		PFLU_RS21700	0.82	-2.8
4,890,132	-		PFLU_RS21700	0.82	-2.1
4,890,132	-		PFLU_RS21700	0.82	-1.5
4,890,132	-		PFLU_RS21700	0.82	-1.8
4,890,298	+				-1.6
4,890,298	+				-2.1
4,890,299	-				-3.0
4,890,299	-				-2.1
4,890,306	+		PFLU_RS21705	0.10	-3.5
4,890,306	+		PFLU_RS21705	0.10	-2.3
4,890,321	+		PFLU_RS21705	0.16	-1.3
4,890,321	+		PFLU_RS21705	0.16	-1.4
4,890,321	+		PFLU_RS21705	0.16	-2.6
4,890,321	+		PFLU_RS21705	0.16	-1.3
4,890,321	+		PFLU_RS21705	0.16	-2.4
4,890,321	+		PFLU_RS21705	0.16	-1.7
4,890,321	+		PFLU_RS21705	0.16	-1.8
4,890,321	+		PFLU_RS21705	0.16	-2.5
4,890,321	+		PFLU_RS21705	0.16	-2.4
4,890,321	+		PFLU_RS21705	0.16	-2.3
4,890,321	+		PFLU_RS21705	0.16	-1.6
4,890,321	+		PFLU_RS21705	0.16	-2.3
4,890,321	+		PFLU_RS21705	0.16	-2.3
4,890,322	-		PFLU_RS21705	0.16	-2.1
4,890,322	-		PFLU_RS21705	0.16	-3.1
4,890,322	-		PFLU_RS21705	0.16	-1.9
4,890,322	-		PFLU_RS21705	0.16	-2.1
4,890,322	-		PFLU_RS21705	0.16	-2.7
4,890,322	-		PFLU_RS21705	0.16	-2.2
4,890,322	-		PFLU_RS21705	0.16	-3.1
4,890,322	-		PFLU_RS21705	0.16	-1.1
4,890,322	-		PFLU_RS21705	0.16	-3.0
4,890,322	-		PFLU_RS21705	0.16	-2.1
4,890,322	-		PFLU_RS21705	0.16	-2.0
4,890,322	-		PFLU_RS21705	0.16	-3.2
4,890,553	+				-1.6
4,890,553	+				-2.5
4,890,553	+				-2.3
4,890,554	-				-3.8
4,890,554	-				-2.4
4,890,555	+				-2.4
4,890,555	+				-1.9
4,890,556	-				-0.9
4,890,556	-				-1.7
4,890,569	+				-2.1
4,890,569	+				-1.7
4,890,569	+				-2.4
4,890,569	+				-1.9
4,890,570	-				-3.0
4,890,668	+		PFLU_RS21710	0.16	-2.7
4,890,668	+		PFLU_RS21710	0.16	-2.6
4,890,668	+		PFLU_RS21710	0.16	-1.9
4,890,668	+		PFLU_RS21710	0.16	-1.2
4,890,668	+		PFLU_RS21710	0.16	-2.0
4,890,668	+		PFLU_RS21710	0.16	-2.4
4,890,669	-		PFLU_RS21710	0.16	-1.2
4,890,669	-		PFLU_RS21710	0.16	-2.7
4,890,669	-		PFLU_RS21710	0.16	-2.3
4,890,669	-		PFLU_RS21710	0.16	-1.7
4,890,722	+		PFLU_RS21710	0.23	-0.9
4,890,722	+		PFLU_RS21710	0.23	-1.8
4,890,946	+		PFLU_RS21710	0.53	-2.3
4,890,947	-		PFLU_RS21710	0.53	-2.4
4,890,947	-		PFLU_RS21710	0.53	-3.2
4,890,947	-		PFLU_RS21710	0.53	-0.8
4,890,947	-		PFLU_RS21710	0.53	-0.4
4,891,180	+		PFLU_RS21710	0.84	-2.1
4,891,181	-		PFLU_RS21710	0.85	-0.9
4,891,214	+		PFLU_RS21710	0.89	-2.8
4,891,215	-		PFLU_RS21710	0.89	-3.0
4,891,215	-		PFLU_RS21710	0.89	-2.4
4,891,215	-		PFLU_RS21710	0.89	-1.1
4,891,215	-		PFLU_RS21710	0.89	-3.0
4,891,284	+				-2.6
4,891,284	+				-2.8
4,891,285	-				-2.8
4,891,296	+				-2.1
4,891,296	+				-1.1
4,891,296	+				+0.2
4,891,296	+				-0.5
4,891,296	+				+0.3
4,891,296	+				-1.3
4,891,296	+				-1.2
4,891,296	+				-1.2
4,891,296	+				-1.8
4,891,296	+				-0.7
4,891,296	+				-1.4
4,891,296	+				-0.4
4,891,297	-				-1.7
4,891,297	-				-2.3
4,891,297	-				-3.4
4,891,297	-				-0.6
4,891,297	-				-0.6
4,891,297	-				-1.8
4,891,303	+				-2.6
4,891,303	+				-1.6
4,891,303	+				-1.6
4,891,303	+				-2.5
4,891,303	+				-1.7
4,891,304	-				-2.2
4,891,304	-				-1.6
4,891,304	-				-2.2
4,891,304	-				-2.0