Experiment: trans-aconitic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS21680 and PFLU_RS21685 are separated by 44 nucleotides PFLU_RS21685 and PFLU_RS21690 are separated by 18 nucleotides PFLU_RS21690 and PFLU_RS21695 are separated by 132 nucleotides
PFLU_RS21680: PFLU_RS21680 - hypothetical protein, at 4,887,497 to 4,887,739
_RS21680
PFLU_RS21685: PFLU_RS21685 - cold-shock protein, at 4,887,784 to 4,887,984
_RS21685
PFLU_RS21690: PFLU_RS21690 - DNA-binding protein, at 4,888,003 to 4,888,215
_RS21690
PFLU_RS21695: PFLU_RS21695 - flagellar biosynthesis protein FlhB, at 4,888,348 to 4,889,484
_RS21695
Position (kb) 4888
4889 Strain fitness (log2 ratio) -7
-6
-5
-4
-3
-2
-1
0
1
2
3 at 4887.075 kb on + strand at 4887.075 kb on + strand at 4887.104 kb on + strand at 4887.104 kb on + strand at 4887.105 kb on - strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.120 kb on + strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.121 kb on - strand at 4887.124 kb on + strand at 4887.124 kb on + strand at 4887.124 kb on + strand at 4887.124 kb on + strand at 4887.124 kb on + strand at 4887.124 kb on + strand at 4887.124 kb on + strand at 4887.124 kb on + strand at 4887.124 kb on + strand at 4887.124 kb on + strand at 4887.125 kb on - strand at 4887.125 kb on - strand at 4887.125 kb on - strand at 4887.125 kb on - strand at 4887.125 kb on - strand at 4887.125 kb on - strand at 4887.125 kb on - strand at 4887.125 kb on - strand at 4887.125 kb on - strand at 4887.125 kb on - strand at 4887.125 kb on - strand at 4887.125 kb on - strand at 4887.125 kb on - strand at 4887.125 kb on - strand at 4887.125 kb on - strand at 4887.228 kb on + strand at 4887.244 kb on + strand at 4887.244 kb on + strand at 4887.245 kb on - strand at 4887.245 kb on - strand at 4887.253 kb on + strand at 4887.253 kb on + strand at 4887.253 kb on + strand at 4887.253 kb on + strand at 4887.254 kb on - strand at 4887.295 kb on + strand at 4887.295 kb on + strand at 4887.295 kb on + strand at 4887.295 kb on + strand at 4887.295 kb on + strand at 4887.296 kb on - strand at 4887.296 kb on - strand at 4887.342 kb on + strand at 4887.343 kb on - strand at 4887.343 kb on - strand at 4887.349 kb on + strand at 4887.349 kb on + strand at 4887.349 kb on + strand at 4887.349 kb on + strand at 4887.349 kb on + strand at 4887.350 kb on - strand at 4887.350 kb on - strand at 4887.362 kb on + strand at 4887.362 kb on + strand at 4887.362 kb on + strand at 4887.362 kb on + strand at 4887.363 kb on - strand at 4887.363 kb on - strand at 4887.363 kb on - strand at 4887.363 kb on - strand at 4887.383 kb on - strand at 4887.393 kb on - strand at 4887.479 kb on + strand at 4887.479 kb on + strand at 4887.479 kb on + strand at 4887.479 kb on + strand at 4887.479 kb on + strand at 4887.480 kb on - strand at 4887.480 kb on - strand at 4887.480 kb on - strand at 4887.480 kb on - strand at 4887.480 kb on - strand at 4887.480 kb on - strand at 4887.480 kb on - strand at 4887.480 kb on - strand at 4887.480 kb on - strand at 4887.480 kb on - strand at 4887.480 kb on - strand at 4887.480 kb on - strand at 4887.667 kb on + strand, within PFLU_RS21680 at 4887.719 kb on - strand at 4887.729 kb on + strand at 4887.787 kb on + strand at 4887.787 kb on + strand at 4887.787 kb on + strand at 4887.787 kb on + strand at 4887.787 kb on + strand at 4887.787 kb on + strand at 4887.787 kb on + strand at 4887.787 kb on + strand at 4887.787 kb on + strand at 4887.787 kb on + strand at 4887.787 kb on + strand at 4887.788 kb on - strand at 4887.788 kb on - strand at 4887.788 kb on - strand at 4887.788 kb on - strand at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.907 kb on + strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.908 kb on - strand, within PFLU_RS21685 at 4887.933 kb on + strand, within PFLU_RS21685 at 4887.933 kb on + strand, within PFLU_RS21685 at 4887.933 kb on + strand, within PFLU_RS21685 at 4887.934 kb on - strand, within PFLU_RS21685 at 4887.934 kb on - strand, within PFLU_RS21685 at 4887.934 kb on - strand, within PFLU_RS21685 at 4887.957 kb on + strand, within PFLU_RS21685 at 4888.023 kb on + strand at 4888.024 kb on - strand at 4888.024 kb on - strand at 4888.184 kb on + strand, within PFLU_RS21690 at 4888.184 kb on + strand, within PFLU_RS21690 at 4888.184 kb on + strand, within PFLU_RS21690 at 4888.184 kb on + strand, within PFLU_RS21690 at 4888.184 kb on + strand, within PFLU_RS21690 at 4888.184 kb on + strand, within PFLU_RS21690 at 4888.185 kb on - strand, within PFLU_RS21690 at 4888.185 kb on - strand, within PFLU_RS21690 at 4888.203 kb on + strand at 4888.204 kb on - strand at 4888.204 kb on - strand at 4888.204 kb on - strand at 4888.204 kb on - strand at 4888.238 kb on + strand at 4888.238 kb on + strand at 4888.239 kb on - strand at 4888.263 kb on + strand at 4888.263 kb on + strand at 4888.263 kb on + strand at 4888.263 kb on + strand at 4888.264 kb on - strand at 4888.264 kb on - strand at 4888.264 kb on - strand at 4888.264 kb on - strand at 4888.266 kb on + strand at 4888.266 kb on + strand at 4888.266 kb on + strand at 4888.266 kb on + strand at 4888.266 kb on + strand at 4888.266 kb on + strand at 4888.266 kb on + strand at 4888.266 kb on + strand at 4888.266 kb on + strand at 4888.266 kb on + strand at 4888.266 kb on + strand at 4888.266 kb on + strand at 4888.266 kb on + strand at 4888.267 kb on - strand at 4888.267 kb on - strand at 4888.267 kb on - strand at 4888.267 kb on - strand at 4888.267 kb on - strand at 4888.267 kb on - strand at 4888.267 kb on - strand at 4888.267 kb on - strand at 4888.267 kb on - strand at 4888.267 kb on - strand at 4888.293 kb on - strand at 4888.311 kb on + strand at 4888.439 kb on + strand at 4888.439 kb on + strand at 4888.439 kb on + strand at 4888.439 kb on + strand at 4888.440 kb on - strand at 4888.445 kb on + strand at 4888.445 kb on + strand at 4888.445 kb on + strand at 4888.445 kb on + strand at 4888.445 kb on + strand at 4888.446 kb on - strand at 4888.446 kb on - strand at 4888.446 kb on - strand at 4888.446 kb on - strand at 4888.446 kb on - strand at 4888.446 kb on - strand at 4888.446 kb on - strand at 4888.453 kb on + strand at 4888.453 kb on + strand at 4888.453 kb on + strand at 4888.453 kb on + strand at 4888.453 kb on + strand at 4888.454 kb on - strand at 4888.472 kb on + strand, within PFLU_RS21695 at 4888.472 kb on + strand, within PFLU_RS21695 at 4888.472 kb on + strand, within PFLU_RS21695 at 4888.472 kb on + strand, within PFLU_RS21695 at 4888.472 kb on + strand, within PFLU_RS21695 at 4888.473 kb on - strand, within PFLU_RS21695 at 4888.511 kb on + strand, within PFLU_RS21695 at 4888.511 kb on + strand, within PFLU_RS21695 at 4888.511 kb on + strand, within PFLU_RS21695 at 4888.594 kb on - strand, within PFLU_RS21695 at 4888.646 kb on + strand, within PFLU_RS21695 at 4888.647 kb on - strand, within PFLU_RS21695 at 4888.647 kb on - strand, within PFLU_RS21695 at 4888.665 kb on - strand, within PFLU_RS21695 at 4889.079 kb on + strand, within PFLU_RS21695
Per-strain Table
Position Strand Gene LocusTag Fraction trans-aconitic 5 mM (C) remove 4,887,075 + -1.6 4,887,075 + +0.8 4,887,104 + -0.5 4,887,104 + +1.2 4,887,105 - -2.0 4,887,120 + +1.5 4,887,120 + -0.7 4,887,120 + +0.2 4,887,120 + -0.4 4,887,120 + +0.2 4,887,120 + +1.0 4,887,120 + +0.1 4,887,120 + -7.5 4,887,120 + +0.5 4,887,120 + -0.2 4,887,120 + +0.2 4,887,120 + +0.9 4,887,120 + -0.1 4,887,120 + +0.5 4,887,120 + -2.0 4,887,120 + -0.0 4,887,120 + +0.1 4,887,120 + +1.6 4,887,120 + +2.1 4,887,120 + -0.3 4,887,120 + +1.4 4,887,120 + +1.1 4,887,120 + +0.6 4,887,120 + +0.9 4,887,120 + +0.5 4,887,120 + +0.6 4,887,121 - -1.3 4,887,121 - -1.5 4,887,121 - -0.8 4,887,121 - -1.7 4,887,121 - -0.9 4,887,121 - -1.5 4,887,121 - -1.8 4,887,121 - -2.5 4,887,121 - +0.5 4,887,121 - -1.4 4,887,121 - -1.7 4,887,121 - -1.5 4,887,121 - +1.8 4,887,121 - -1.4 4,887,121 - -1.0 4,887,121 - -1.4 4,887,121 - -2.1 4,887,121 - -2.6 4,887,121 - -1.3 4,887,121 - +0.1 4,887,121 - -0.3 4,887,121 - -3.9 4,887,121 - -1.4 4,887,121 - -2.9 4,887,124 + +3.2 4,887,124 + -0.5 4,887,124 + +0.1 4,887,124 + +0.1 4,887,124 + +0.9 4,887,124 + +0.4 4,887,124 + +0.1 4,887,124 + -1.3 4,887,124 + +1.5 4,887,124 + -1.6 4,887,125 - -1.1 4,887,125 - -1.3 4,887,125 - -1.0 4,887,125 - -1.0 4,887,125 - -1.2 4,887,125 - -3.3 4,887,125 - -2.8 4,887,125 - -1.8 4,887,125 - -0.6 4,887,125 - -2.9 4,887,125 - -1.5 4,887,125 - -1.0 4,887,125 - -0.7 4,887,125 - -2.9 4,887,125 - -2.6 4,887,228 + -0.7 4,887,244 + +0.2 4,887,244 + -0.7 4,887,245 - -0.1 4,887,245 - +1.2 4,887,253 + -2.6 4,887,253 + +0.8 4,887,253 + +0.2 4,887,253 + +0.8 4,887,254 - -2.4 4,887,295 + +1.2 4,887,295 + -0.6 4,887,295 + -0.1 4,887,295 + +0.3 4,887,295 + -0.8 4,887,296 - -0.6 4,887,296 - +0.3 4,887,342 + +0.5 4,887,343 - +0.4 4,887,343 - +0.5 4,887,349 + -0.0 4,887,349 + +0.7 4,887,349 + -0.4 4,887,349 + +0.2 4,887,349 + -0.4 4,887,350 - +1.5 4,887,350 - +0.2 4,887,362 + -0.1 4,887,362 + +0.5 4,887,362 + -1.0 4,887,362 + +0.9 4,887,363 - +1.0 4,887,363 - -0.7 4,887,363 - +0.7 4,887,363 - +0.2 4,887,383 - -0.9 4,887,393 - -0.1 4,887,479 + -0.5 4,887,479 + +0.8 4,887,479 + +1.3 4,887,479 + +1.1 4,887,479 + -0.4 4,887,480 - +0.1 4,887,480 - -0.7 4,887,480 - -1.0 4,887,480 - +0.4 4,887,480 - +0.1 4,887,480 - -0.1 4,887,480 - -0.7 4,887,480 - -0.6 4,887,480 - -0.0 4,887,480 - -2.0 4,887,480 - +0.5 4,887,480 - +0.6 4,887,667 + PFLU_RS21680 0.70 +0.5 4,887,719 - +0.1 4,887,729 + +0.7 4,887,787 + +1.5 4,887,787 + -0.2 4,887,787 + -0.6 4,887,787 + +0.3 4,887,787 + +0.8 4,887,787 + +0.5 4,887,787 + -0.6 4,887,787 + +0.2 4,887,787 + +0.3 4,887,787 + -0.2 4,887,787 + +0.2 4,887,788 - +0.4 4,887,788 - +0.5 4,887,788 - +0.4 4,887,788 - -0.8 4,887,907 + PFLU_RS21685 0.61 +0.3 4,887,907 + PFLU_RS21685 0.61 +1.6 4,887,907 + PFLU_RS21685 0.61 +1.2 4,887,907 + PFLU_RS21685 0.61 +0.2 4,887,907 + PFLU_RS21685 0.61 +0.6 4,887,907 + PFLU_RS21685 0.61 +1.2 4,887,907 + PFLU_RS21685 0.61 +1.9 4,887,907 + PFLU_RS21685 0.61 +0.5 4,887,907 + PFLU_RS21685 0.61 +0.3 4,887,907 + PFLU_RS21685 0.61 +0.6 4,887,907 + PFLU_RS21685 0.61 +0.1 4,887,907 + PFLU_RS21685 0.61 -0.9 4,887,907 + PFLU_RS21685 0.61 +1.2 4,887,907 + PFLU_RS21685 0.61 -1.3 4,887,907 + PFLU_RS21685 0.61 -0.5 4,887,907 + PFLU_RS21685 0.61 -0.9 4,887,907 + PFLU_RS21685 0.61 +0.5 4,887,907 + PFLU_RS21685 0.61 -0.4 4,887,907 + PFLU_RS21685 0.61 -0.2 4,887,907 + PFLU_RS21685 0.61 +3.2 4,887,908 - PFLU_RS21685 0.62 -1.4 4,887,908 - PFLU_RS21685 0.62 +0.4 4,887,908 - PFLU_RS21685 0.62 +0.3 4,887,908 - PFLU_RS21685 0.62 +1.5 4,887,908 - PFLU_RS21685 0.62 -0.7 4,887,908 - PFLU_RS21685 0.62 -1.4 4,887,908 - PFLU_RS21685 0.62 -0.2 4,887,908 - PFLU_RS21685 0.62 -0.6 4,887,908 - PFLU_RS21685 0.62 +1.3 4,887,908 - PFLU_RS21685 0.62 -0.2 4,887,908 - PFLU_RS21685 0.62 -0.6 4,887,908 - PFLU_RS21685 0.62 +0.6 4,887,908 - PFLU_RS21685 0.62 +0.2 4,887,908 - PFLU_RS21685 0.62 +1.2 4,887,908 - PFLU_RS21685 0.62 +0.5 4,887,908 - PFLU_RS21685 0.62 -0.3 4,887,908 - PFLU_RS21685 0.62 -1.5 4,887,908 - PFLU_RS21685 0.62 +0.4 4,887,908 - PFLU_RS21685 0.62 +3.5 4,887,908 - PFLU_RS21685 0.62 +0.0 4,887,933 + PFLU_RS21685 0.74 -0.9 4,887,933 + PFLU_RS21685 0.74 +0.2 4,887,933 + PFLU_RS21685 0.74 +0.6 4,887,934 - PFLU_RS21685 0.75 +0.5 4,887,934 - PFLU_RS21685 0.75 -2.7 4,887,934 - PFLU_RS21685 0.75 -0.2 4,887,957 + PFLU_RS21685 0.86 -0.4 4,888,023 + +1.3 4,888,024 - -0.6 4,888,024 - -0.0 4,888,184 + PFLU_RS21690 0.85 +1.8 4,888,184 + PFLU_RS21690 0.85 +0.6 4,888,184 + PFLU_RS21690 0.85 +2.1 4,888,184 + PFLU_RS21690 0.85 -0.4 4,888,184 + PFLU_RS21690 0.85 -0.4 4,888,184 + PFLU_RS21690 0.85 -0.6 4,888,185 - PFLU_RS21690 0.85 -1.0 4,888,185 - PFLU_RS21690 0.85 -0.8 4,888,203 + +0.4 4,888,204 - +0.4 4,888,204 - +0.2 4,888,204 - -0.2 4,888,204 - -0.7 4,888,238 + +0.5 4,888,238 + +0.3 4,888,239 - -0.9 4,888,263 + -0.4 4,888,263 + +1.0 4,888,263 + -1.7 4,888,263 + -0.5 4,888,264 - -1.4 4,888,264 - -1.4 4,888,264 - -0.6 4,888,264 - -0.2 4,888,266 + +2.5 4,888,266 + -0.8 4,888,266 + -0.1 4,888,266 + +0.9 4,888,266 + -0.8 4,888,266 + +0.4 4,888,266 + -0.1 4,888,266 + -0.0 4,888,266 + +2.2 4,888,266 + -0.1 4,888,266 + -0.4 4,888,266 + -0.1 4,888,266 + +0.6 4,888,267 - -1.1 4,888,267 - -1.0 4,888,267 - +0.3 4,888,267 - -2.6 4,888,267 - -1.3 4,888,267 - -1.0 4,888,267 - -1.4 4,888,267 - -0.3 4,888,267 - -0.9 4,888,267 - -1.6 4,888,293 - -0.2 4,888,311 + +0.5 4,888,439 + -1.6 4,888,439 + -1.6 4,888,439 + -1.9 4,888,439 + -2.0 4,888,440 - -2.3 4,888,445 + -1.8 4,888,445 + -1.3 4,888,445 + -3.0 4,888,445 + -2.6 4,888,445 + -2.4 4,888,446 - -2.0 4,888,446 - -3.3 4,888,446 - -2.1 4,888,446 - -2.8 4,888,446 - -1.8 4,888,446 - -0.8 4,888,446 - -2.7 4,888,453 + -1.9 4,888,453 + -1.9 4,888,453 + -1.1 4,888,453 + -1.4 4,888,453 + -1.2 4,888,454 - -1.1 4,888,472 + PFLU_RS21695 0.11 -1.1 4,888,472 + PFLU_RS21695 0.11 -2.7 4,888,472 + PFLU_RS21695 0.11 -1.3 4,888,472 + PFLU_RS21695 0.11 -2.6 4,888,472 + PFLU_RS21695 0.11 -1.5 4,888,473 - PFLU_RS21695 0.11 -2.1 4,888,511 + PFLU_RS21695 0.14 -2.3 4,888,511 + PFLU_RS21695 0.14 -2.5 4,888,511 + PFLU_RS21695 0.14 -1.4 4,888,594 - PFLU_RS21695 0.22 -2.9 4,888,646 + PFLU_RS21695 0.26 -1.0 4,888,647 - PFLU_RS21695 0.26 -2.7 4,888,647 - PFLU_RS21695 0.26 -2.3 4,888,665 - PFLU_RS21695 0.28 -2.8 4,889,079 + PFLU_RS21695 0.64 -3.3
Or see this region's nucleotide sequence