Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS15260

Experiment: trans-aconitic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	trans-aconitic 5 mM (C)
3,418,453	+		PFLU_RS15255	0.27	-0.4
3,418,453	+		PFLU_RS15255	0.27	+0.9
3,418,453	+		PFLU_RS15255	0.27	-0.4
3,418,453	+		PFLU_RS15255	0.27	+0.5
3,418,453	+		PFLU_RS15255	0.27	-2.6
3,418,453	+		PFLU_RS15255	0.27	-2.6
3,418,453	+		PFLU_RS15255	0.27	-0.3
3,418,453	+		PFLU_RS15255	0.27	-0.9
3,418,453	+		PFLU_RS15255	0.27	+1.4
3,418,453	+		PFLU_RS15255	0.27	-1.5
3,418,453	+		PFLU_RS15255	0.27	+1.8
3,418,453	+		PFLU_RS15255	0.27	+1.2
3,418,454	-		PFLU_RS15255	0.27	+0.4
3,418,454	-		PFLU_RS15255	0.27	-0.4
3,418,454	-		PFLU_RS15255	0.27	+0.9
3,418,454	-		PFLU_RS15255	0.27	+1.4
3,418,454	-		PFLU_RS15255	0.27	+0.2
3,418,454	-		PFLU_RS15255	0.27	-0.5
3,418,454	-		PFLU_RS15255	0.27	-1.9
3,418,454	-		PFLU_RS15255	0.27	+0.2
3,418,454	-		PFLU_RS15255	0.27	-0.3
3,418,454	-		PFLU_RS15255	0.27	+0.3
3,418,454	-		PFLU_RS15255	0.27	-0.3
3,418,454	-		PFLU_RS15255	0.27	+1.7
3,418,454	-		PFLU_RS15255	0.27	-0.4
3,418,454	-		PFLU_RS15255	0.27	-0.1
3,418,465	+		PFLU_RS15255	0.28	-0.1
3,418,465	+		PFLU_RS15255	0.28	+1.3
3,418,465	+		PFLU_RS15255	0.28	+1.4
3,418,465	+		PFLU_RS15255	0.28	-0.9
3,418,465	+		PFLU_RS15255	0.28	-1.5
3,418,465	+		PFLU_RS15255	0.28	-1.1
3,418,465	+		PFLU_RS15255	0.28	-0.5
3,418,466	-		PFLU_RS15255	0.28	+0.7
3,418,466	-		PFLU_RS15255	0.28	-0.4
3,418,466	-		PFLU_RS15255	0.28	+1.9
3,418,466	-		PFLU_RS15255	0.28	+0.8
3,418,466	-		PFLU_RS15255	0.28	-2.1
3,418,466	-		PFLU_RS15255	0.28	+0.8
3,418,466	-		PFLU_RS15255	0.28	-0.3
3,418,466	-		PFLU_RS15255	0.28	-2.1
3,418,466	-		PFLU_RS15255	0.28	-2.1
3,418,466	-		PFLU_RS15255	0.28	+0.5
3,418,466	-		PFLU_RS15255	0.28	-1.4
3,418,466	-		PFLU_RS15255	0.28	+1.4
3,418,466	-		PFLU_RS15255	0.28	-0.8
3,418,466	-		PFLU_RS15255	0.28	-0.1
3,418,466	-		PFLU_RS15255	0.28	+0.0
3,418,781	-		PFLU_RS15255	0.51	-1.6
3,418,781	-		PFLU_RS15255	0.51	+0.9
3,418,905	-		PFLU_RS15255	0.60	-0.4
3,419,029	+		PFLU_RS15255	0.70	+0.3
3,419,029	+		PFLU_RS15255	0.70	-0.7
3,419,030	-		PFLU_RS15255	0.70	-0.6
3,419,143	+		PFLU_RS15255	0.78	+1.3
3,419,144	-		PFLU_RS15255	0.78	+0.6
3,419,463	-		PFLU_RS15260	0.10	+1.1
3,419,479	+		PFLU_RS15260	0.14	+0.6
3,419,724	+		PFLU_RS15260	0.78	-0.1
3,419,724	+		PFLU_RS15260	0.78	-0.4
3,419,724	+		PFLU_RS15260	0.78	-1.1
3,419,725	-		PFLU_RS15260	0.78	+0.9
3,419,725	-		PFLU_RS15260	0.78	+0.1
3,419,725	-		PFLU_RS15260	0.78	-0.2
3,419,725	-		PFLU_RS15260	0.78	-0.4
3,419,725	-		PFLU_RS15260	0.78	-1.4
3,419,725	-		PFLU_RS15260	0.78	+0.0
3,419,725	-		PFLU_RS15260	0.78	+0.6
3,419,746	-		PFLU_RS15260	0.84	+0.6
3,419,758	-		PFLU_RS15260	0.87	+1.1
3,419,803	+				-1.6
3,419,804	-				+0.6
3,419,804	-				-1.2
3,419,804	-				+0.4
3,419,804	-				+0.4
3,419,804	-				+0.4
3,419,804	-				+0.2
3,419,804	-				+1.6
3,419,904	+				-0.9
3,420,176	+		PFLU_RS15265	0.29	+1.2
3,420,177	-		PFLU_RS15265	0.29	-0.9
3,420,177	-		PFLU_RS15265	0.29	-2.3
3,420,177	-		PFLU_RS15265	0.29	-0.9
3,420,184	+		PFLU_RS15265	0.30	+1.9
3,420,185	-		PFLU_RS15265	0.30	-0.9
3,420,331	-		PFLU_RS15265	0.42	-0.3
3,420,405	+		PFLU_RS15265	0.48	-1.2
3,420,405	+		PFLU_RS15265	0.48	-1.4
3,420,405	+		PFLU_RS15265	0.48	-0.3
3,420,405	+		PFLU_RS15265	0.48	+0.3
3,420,406	-		PFLU_RS15265	0.48	-1.6
3,420,756	+		PFLU_RS15265	0.76	-0.1
3,420,772	-		PFLU_RS15265	0.78	+0.1
3,420,772	-		PFLU_RS15265	0.78	+0.2