Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5318

Experiment: nitrogen source nitrite 5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrite 5mM
6,112,361	+				+1.2
6,112,362	-				-0.8
6,112,379	+				-1.9
6,112,400	-				-0.6
6,112,402	+				-0.9
6,112,402	+				-1.5
6,112,402	+				+0.3
6,112,403	-				-1.3
6,112,403	-				-3.0
6,112,403	-				+0.6
6,112,403	-				-1.0
6,112,575	+		Pf6N2E2_5317	0.18	+2.0
6,112,589	+		Pf6N2E2_5317	0.20	+2.0
6,112,590	-		Pf6N2E2_5317	0.20	-1.8
6,112,590	-		Pf6N2E2_5317	0.20	-2.2
6,112,602	+		Pf6N2E2_5317	0.21	-1.7
6,112,602	+		Pf6N2E2_5317	0.21	-0.2
6,112,602	+		Pf6N2E2_5317	0.21	-4.0
6,112,602	+		Pf6N2E2_5317	0.21	-1.6
6,112,603	-		Pf6N2E2_5317	0.21	-3.6
6,112,603	-		Pf6N2E2_5317	0.21	-3.3
6,112,603	-		Pf6N2E2_5317	0.21	-4.6
6,112,683	+		Pf6N2E2_5317	0.30	-0.9
6,112,684	-		Pf6N2E2_5317	0.30	-1.9
6,112,684	-		Pf6N2E2_5317	0.30	-3.5
6,112,684	-		Pf6N2E2_5317	0.30	-0.1
6,112,692	+		Pf6N2E2_5317	0.31	-4.3
6,112,692	+		Pf6N2E2_5317	0.31	-2.2
6,112,692	+		Pf6N2E2_5317	0.31	+0.4
6,112,692	+		Pf6N2E2_5317	0.31	-2.5
6,112,692	+		Pf6N2E2_5317	0.31	-2.3
6,112,693	-		Pf6N2E2_5317	0.31	+2.0
6,112,693	-		Pf6N2E2_5317	0.31	-1.1
6,112,693	-		Pf6N2E2_5317	0.31	-2.8
6,112,920	+		Pf6N2E2_5317	0.56	-3.3
6,112,920	+		Pf6N2E2_5317	0.56	-2.4
6,112,920	+		Pf6N2E2_5317	0.56	-3.4
6,112,920	+		Pf6N2E2_5317	0.56	-2.2
6,112,921	-		Pf6N2E2_5317	0.56	-1.9
6,112,921	-		Pf6N2E2_5317	0.56	-2.4
6,112,921	-		Pf6N2E2_5317	0.56	-1.3
6,112,986	-		Pf6N2E2_5317	0.63	-3.3
6,112,998	+		Pf6N2E2_5317	0.65	-3.3
6,112,998	+		Pf6N2E2_5317	0.65	-3.4
6,112,998	+		Pf6N2E2_5317	0.65	-2.1
6,112,999	-		Pf6N2E2_5317	0.65	-3.3
6,112,999	-		Pf6N2E2_5317	0.65	-1.6
6,112,999	-		Pf6N2E2_5317	0.65	-0.7
6,113,093	+		Pf6N2E2_5317	0.75	-2.5
6,113,093	+		Pf6N2E2_5317	0.75	-1.6
6,113,093	+		Pf6N2E2_5317	0.75	-4.2
6,113,093	+		Pf6N2E2_5317	0.75	-3.6
6,113,094	-		Pf6N2E2_5317	0.75	-1.5
6,113,094	-		Pf6N2E2_5317	0.75	-1.7
6,113,115	+		Pf6N2E2_5317	0.77	-3.9
6,113,116	-		Pf6N2E2_5317	0.77	-0.1
6,113,116	-		Pf6N2E2_5317	0.77	-1.6
6,113,116	-		Pf6N2E2_5317	0.77	-2.1
6,113,116	-		Pf6N2E2_5317	0.77	-1.4
6,113,160	+		Pf6N2E2_5317	0.82	-4.4
6,113,161	-		Pf6N2E2_5317	0.82	-0.7
6,113,161	-		Pf6N2E2_5317	0.82	+1.0
6,113,161	-		Pf6N2E2_5317	0.82	-1.7
6,113,205	+		Pf6N2E2_5317	0.87	-3.0
6,113,205	+		Pf6N2E2_5317	0.87	-2.7
6,113,205	+		Pf6N2E2_5317	0.87	-4.4
6,113,205	+		Pf6N2E2_5317	0.87	-1.9
6,113,205	+		Pf6N2E2_5317	0.87	-1.7
6,113,205	+		Pf6N2E2_5317	0.87	-1.9
6,113,205	+		Pf6N2E2_5317	0.87	-3.9
6,113,205	+		Pf6N2E2_5317	0.87	-4.1
6,113,205	+		Pf6N2E2_5317	0.87	-2.4
6,113,206	-		Pf6N2E2_5317	0.87	-3.2
6,113,206	-		Pf6N2E2_5317	0.87	-2.0
6,113,206	-		Pf6N2E2_5317	0.87	-3.2
6,113,206	-		Pf6N2E2_5317	0.87	-1.5
6,113,206	-		Pf6N2E2_5317	0.87	-2.1
6,113,206	-		Pf6N2E2_5317	0.87	-3.1
6,113,206	-		Pf6N2E2_5317	0.87	-1.0
6,113,206	-		Pf6N2E2_5317	0.87	-1.3
6,113,319	+				-3.3
6,113,320	-				-1.9
6,113,320	-				-0.3
6,113,334	-				-3.1
6,113,338	+				-3.7
6,113,338	+				-2.2
6,113,339	-				-2.7
6,113,433	+				-1.5
6,113,433	+				-1.2
6,113,434	-				-2.9
6,113,434	-				-1.7
6,113,434	-				-2.5
6,113,434	-				-0.4
6,113,434	-				-3.7
6,113,434	-				-0.2
6,113,451	+				-0.7
6,113,451	+				-0.7
6,113,451	+				-4.6
6,113,451	+				-1.3
6,113,452	-				-0.1
6,113,452	-				+0.4
6,113,505	+				-0.8
6,113,505	+				-3.2
6,113,505	+				+2.0
6,113,505	+				-2.5
6,113,505	+				-1.4
6,113,506	-				-0.3
6,113,506	-				-1.7
6,113,506	-				+0.2
6,113,564	+		Pf6N2E2_5318	0.12	-1.2
6,113,564	+		Pf6N2E2_5318	0.12	-1.7
6,113,619	+		Pf6N2E2_5318	0.14	-1.4
6,113,619	+		Pf6N2E2_5318	0.14	-1.7
6,113,619	+		Pf6N2E2_5318	0.14	-0.0
6,113,620	-		Pf6N2E2_5318	0.15	-1.1
6,113,620	-		Pf6N2E2_5318	0.15	-4.3
6,113,865	+		Pf6N2E2_5318	0.27	-2.6
6,113,866	-		Pf6N2E2_5318	0.27	-1.2
6,113,866	-		Pf6N2E2_5318	0.27	-0.6
6,113,866	-		Pf6N2E2_5318	0.27	+0.1
6,113,890	-		Pf6N2E2_5318	0.28	+1.0
6,113,892	+		Pf6N2E2_5318	0.28	-3.3
6,113,892	+		Pf6N2E2_5318	0.28	-1.3
6,113,892	+		Pf6N2E2_5318	0.28	+2.0
6,113,892	+		Pf6N2E2_5318	0.28	+2.0
6,113,892	+		Pf6N2E2_5318	0.28	-4.3
6,113,892	+		Pf6N2E2_5318	0.28	-0.8
6,113,892	+		Pf6N2E2_5318	0.28	-1.7
6,113,892	+		Pf6N2E2_5318	0.28	-1.6
6,113,892	+		Pf6N2E2_5318	0.28	-2.6
6,113,892	+		Pf6N2E2_5318	0.28	-1.3
6,113,893	-		Pf6N2E2_5318	0.28	-2.0
6,113,893	-		Pf6N2E2_5318	0.28	-0.3
6,113,893	-		Pf6N2E2_5318	0.28	-1.2
6,113,893	-		Pf6N2E2_5318	0.28	-2.7
6,113,893	-		Pf6N2E2_5318	0.28	-2.2
6,113,893	-		Pf6N2E2_5318	0.28	+0.5
6,113,906	-		Pf6N2E2_5318	0.29	-1.2
6,113,912	-		Pf6N2E2_5318	0.29	-1.8
6,113,924	+		Pf6N2E2_5318	0.29	-1.6
6,113,925	-		Pf6N2E2_5318	0.30	-1.2
6,114,097	-		Pf6N2E2_5318	0.38	-2.6
6,114,097	-		Pf6N2E2_5318	0.38	+2.0
6,114,147	+		Pf6N2E2_5318	0.40	-3.4
6,114,147	+		Pf6N2E2_5318	0.40	+0.6
6,114,147	+		Pf6N2E2_5318	0.40	+2.0
6,114,147	+		Pf6N2E2_5318	0.40	+0.9
6,114,147	+		Pf6N2E2_5318	0.40	-0.4
6,114,147	+		Pf6N2E2_5318	0.40	-2.9
6,114,147	+		Pf6N2E2_5318	0.40	-0.0
6,114,147	+		Pf6N2E2_5318	0.40	-3.4
6,114,147	+		Pf6N2E2_5318	0.40	+0.5
6,114,147	+		Pf6N2E2_5318	0.40	-2.4
6,114,147	+		Pf6N2E2_5318	0.40	-2.1
6,114,148	-		Pf6N2E2_5318	0.41	-3.0
6,114,148	-		Pf6N2E2_5318	0.41	-2.5
6,114,148	-		Pf6N2E2_5318	0.41	-3.0
6,114,148	-		Pf6N2E2_5318	0.41	-2.2
6,114,148	-		Pf6N2E2_5318	0.41	+0.2
6,114,148	-		Pf6N2E2_5318	0.41	-3.7
6,114,148	-		Pf6N2E2_5318	0.41	-1.0
6,114,148	-		Pf6N2E2_5318	0.41	-2.0
6,114,148	-		Pf6N2E2_5318	0.41	-0.0
6,114,148	-		Pf6N2E2_5318	0.41	-1.1
6,114,148	-		Pf6N2E2_5318	0.41	+1.2
6,114,148	-		Pf6N2E2_5318	0.41	-3.6
6,114,186	+		Pf6N2E2_5318	0.42	-1.0
6,114,186	+		Pf6N2E2_5318	0.42	-2.1
6,114,186	+		Pf6N2E2_5318	0.42	-2.0
6,114,186	+		Pf6N2E2_5318	0.42	-0.6
6,114,186	+		Pf6N2E2_5318	0.42	-2.4
6,114,186	+		Pf6N2E2_5318	0.42	-4.1
6,114,186	+		Pf6N2E2_5318	0.42	-1.1
6,114,186	+		Pf6N2E2_5318	0.42	-0.7
6,114,187	-		Pf6N2E2_5318	0.42	-3.4
6,114,187	-		Pf6N2E2_5318	0.42	-0.1
6,114,187	-		Pf6N2E2_5318	0.42	-0.4
6,114,187	-		Pf6N2E2_5318	0.42	-3.4
6,114,187	-		Pf6N2E2_5318	0.42	-1.7
6,114,187	-		Pf6N2E2_5318	0.42	-3.5
6,114,187	-		Pf6N2E2_5318	0.42	-1.6
6,114,276	+		Pf6N2E2_5318	0.47	-1.8
6,114,276	+		Pf6N2E2_5318	0.47	-2.5
6,114,276	+		Pf6N2E2_5318	0.47	-4.5
6,114,276	+		Pf6N2E2_5318	0.47	-1.9
6,114,276	+		Pf6N2E2_5318	0.47	-4.0
6,114,276	+		Pf6N2E2_5318	0.47	-4.2
6,114,276	+		Pf6N2E2_5318	0.47	-0.1
6,114,276	+		Pf6N2E2_5318	0.47	-3.5
6,114,277	-		Pf6N2E2_5318	0.47	-2.5
6,114,277	-		Pf6N2E2_5318	0.47	-3.4
6,114,277	-		Pf6N2E2_5318	0.47	-1.1
6,114,435	+		Pf6N2E2_5318	0.55	-2.7
6,114,435	+		Pf6N2E2_5318	0.55	-2.2
6,114,435	+		Pf6N2E2_5318	0.55	+2.0
6,114,435	+		Pf6N2E2_5318	0.55	-3.0
6,114,435	+		Pf6N2E2_5318	0.55	-1.7
6,114,435	+		Pf6N2E2_5318	0.55	-1.6
6,114,436	-		Pf6N2E2_5318	0.55	-0.9
6,114,436	-		Pf6N2E2_5318	0.55	-1.4
6,114,520	+		Pf6N2E2_5318	0.59	-0.5
6,114,520	+		Pf6N2E2_5318	0.59	-2.4
6,114,521	-		Pf6N2E2_5318	0.59	-2.1
6,114,521	-		Pf6N2E2_5318	0.59	+0.4
6,114,521	-		Pf6N2E2_5318	0.59	-2.0
6,114,618	+		Pf6N2E2_5318	0.64	-2.6
6,114,618	+		Pf6N2E2_5318	0.64	-1.7
6,114,618	+		Pf6N2E2_5318	0.64	-3.4
6,114,619	-		Pf6N2E2_5318	0.64	-2.4
6,114,639	+		Pf6N2E2_5318	0.65	-4.6
6,114,639	+		Pf6N2E2_5318	0.65	-3.6
6,114,639	+		Pf6N2E2_5318	0.65	-1.2
6,114,639	+		Pf6N2E2_5318	0.65	-2.3
6,114,640	-		Pf6N2E2_5318	0.65	-2.0
6,114,640	-		Pf6N2E2_5318	0.65	-0.8
6,114,738	+		Pf6N2E2_5318	0.70	-0.8
6,114,738	+		Pf6N2E2_5318	0.70	+2.0
6,114,738	+		Pf6N2E2_5318	0.70	-1.5
6,114,738	+		Pf6N2E2_5318	0.70	+1.0
6,114,738	+		Pf6N2E2_5318	0.70	-1.9
6,114,738	+		Pf6N2E2_5318	0.70	+2.0
6,114,738	+		Pf6N2E2_5318	0.70	-2.1
6,114,738	+		Pf6N2E2_5318	0.70	-0.6
6,114,739	-		Pf6N2E2_5318	0.70	-2.0
6,114,739	-		Pf6N2E2_5318	0.70	-0.0
6,114,739	-		Pf6N2E2_5318	0.70	-0.6
6,114,739	-		Pf6N2E2_5318	0.70	-3.3
6,114,739	-		Pf6N2E2_5318	0.70	-2.3
6,114,739	-		Pf6N2E2_5318	0.70	-3.4
6,114,739	-		Pf6N2E2_5318	0.70	-3.1
6,114,739	-		Pf6N2E2_5318	0.70	-0.8
6,114,742	+		Pf6N2E2_5318	0.70	+0.4
6,114,742	+		Pf6N2E2_5318	0.70	-2.8
6,114,742	+		Pf6N2E2_5318	0.70	-2.5
6,114,742	+		Pf6N2E2_5318	0.70	-1.7
6,114,743	-		Pf6N2E2_5318	0.70	-1.1
6,114,743	-		Pf6N2E2_5318	0.70	-2.1
6,114,743	-		Pf6N2E2_5318	0.70	-2.1
6,114,810	+		Pf6N2E2_5318	0.73	+0.2
6,114,811	-		Pf6N2E2_5318	0.73	-3.0
6,114,849	-		Pf6N2E2_5318	0.75	-1.2
6,114,873	+		Pf6N2E2_5318	0.76	+2.0
6,114,873	+		Pf6N2E2_5318	0.76	-2.9
6,114,873	+		Pf6N2E2_5318	0.76	-1.6
6,114,873	+		Pf6N2E2_5318	0.76	+0.2
6,114,873	+		Pf6N2E2_5318	0.76	-2.7
6,114,873	+		Pf6N2E2_5318	0.76	-2.3
6,114,873	+		Pf6N2E2_5318	0.76	-0.5
6,114,873	+		Pf6N2E2_5318	0.76	-2.3
6,114,873	+		Pf6N2E2_5318	0.76	-2.0
6,114,873	+		Pf6N2E2_5318	0.76	-2.7
6,114,874	-		Pf6N2E2_5318	0.76	-2.4
6,114,874	-		Pf6N2E2_5318	0.76	-0.1
6,114,874	-		Pf6N2E2_5318	0.76	-3.7
6,114,978	+		Pf6N2E2_5318	0.81	-0.4
6,115,068	+		Pf6N2E2_5318	0.86	-0.2
6,115,068	+		Pf6N2E2_5318	0.86	-2.9
6,115,068	+		Pf6N2E2_5318	0.86	-3.6
6,115,068	+		Pf6N2E2_5318	0.86	-1.7
6,115,068	+		Pf6N2E2_5318	0.86	-3.6
6,115,069	-		Pf6N2E2_5318	0.86	-0.8
6,115,069	-		Pf6N2E2_5318	0.86	+2.0
6,115,069	-		Pf6N2E2_5318	0.86	-1.0
6,115,069	-		Pf6N2E2_5318	0.86	-2.5
6,115,069	-		Pf6N2E2_5318	0.86	-0.8
6,115,069	-		Pf6N2E2_5318	0.86	-2.7
6,115,200	+				-2.0
6,115,201	-				-3.1
6,115,236	+				-2.7
6,115,236	+				-1.3
6,115,237	-				+2.0
6,115,237	-				-1.3
6,115,353	+				-1.8
6,115,353	+				-0.2
6,115,353	+				-0.5
6,115,354	-				-0.1
6,115,369	+				-2.5
6,115,369	+				-1.2
6,115,370	-				-1.6
6,115,370	-				-1.4
6,115,464	+		Pf6N2E2_5319	0.17	-0.9
6,115,465	-		Pf6N2E2_5319	0.17	+0.4
6,115,509	+		Pf6N2E2_5319	0.24	-3.4
6,115,524	-		Pf6N2E2_5319	0.26	-2.0
6,115,572	+		Pf6N2E2_5319	0.34	-1.7
6,115,573	-		Pf6N2E2_5319	0.34	-3.1
6,115,576	+		Pf6N2E2_5319	0.35	+0.2
6,115,576	+		Pf6N2E2_5319	0.35	-0.6
6,115,576	+		Pf6N2E2_5319	0.35	-0.4
6,115,577	-		Pf6N2E2_5319	0.35	-1.7
6,115,577	-		Pf6N2E2_5319	0.35	-1.0
6,115,617	+		Pf6N2E2_5319	0.41	-1.9
6,115,617	+		Pf6N2E2_5319	0.41	-1.0
6,115,618	-		Pf6N2E2_5319	0.41	-1.7
6,115,854	+		Pf6N2E2_5319	0.79	-2.4
6,115,854	+		Pf6N2E2_5319	0.79	-0.8
6,115,854	+		Pf6N2E2_5319	0.79	-3.5
6,115,854	+		Pf6N2E2_5319	0.79	+0.4
6,115,854	+		Pf6N2E2_5319	0.79	-1.8
6,115,854	+		Pf6N2E2_5319	0.79	-1.9
6,115,854	+		Pf6N2E2_5319	0.79	+0.4
6,115,854	+		Pf6N2E2_5319	0.79	-2.0
6,115,855	-		Pf6N2E2_5319	0.79	-3.7
6,115,855	-		Pf6N2E2_5319	0.79	+0.6
6,115,855	-		Pf6N2E2_5319	0.79	-0.5
6,115,855	-		Pf6N2E2_5319	0.79	-3.5
6,115,855	-		Pf6N2E2_5319	0.79	-1.0
6,115,965	+				-1.8
6,115,965	+				+1.0
6,115,965	+				-1.9
6,115,966	-				-4.6
6,115,966	-				-0.8
6,115,983	+				-3.4
6,115,983	+				-1.2
6,115,983	+				-2.2
6,115,983	+				+0.2
6,115,984	-				-0.3
6,115,984	-				+0.2
6,115,984	-				-1.8
6,116,044	-		Pf6N2E2_5320	0.17	-2.8
6,116,103	+		Pf6N2E2_5320	0.35	-1.5
6,116,103	+		Pf6N2E2_5320	0.35	-3.6
6,116,104	-		Pf6N2E2_5320	0.35	-1.1
6,116,104	-		Pf6N2E2_5320	0.35	-1.2
6,116,164	+		Pf6N2E2_5320	0.53	-0.2
6,116,164	+		Pf6N2E2_5320	0.53	+0.6
6,116,164	+		Pf6N2E2_5320	0.53	-0.3
6,116,165	-		Pf6N2E2_5320	0.53	-0.3
6,116,181	+		Pf6N2E2_5320	0.58	+2.0
6,116,181	+		Pf6N2E2_5320	0.58	-1.1
6,116,181	+		Pf6N2E2_5320	0.58	-3.3
6,116,182	-		Pf6N2E2_5320	0.58	+2.0
6,116,182	-		Pf6N2E2_5320	0.58	-1.3
6,116,216	+		Pf6N2E2_5320	0.68	-3.1
6,116,216	+		Pf6N2E2_5320	0.68	-3.9
6,116,216	+		Pf6N2E2_5320	0.68	-3.1
6,116,216	+		Pf6N2E2_5320	0.68	-0.2
6,116,216	+		Pf6N2E2_5320	0.68	-2.1
6,116,216	+		Pf6N2E2_5320	0.68	-1.6
6,116,216	+		Pf6N2E2_5320	0.68	-3.0
6,116,217	-		Pf6N2E2_5320	0.69	-2.7
6,116,217	-		Pf6N2E2_5320	0.69	-1.7
6,116,217	-		Pf6N2E2_5320	0.69	-3.0
6,116,217	-		Pf6N2E2_5320	0.69	-2.9
6,116,217	-		Pf6N2E2_5320	0.69	-0.9
6,116,217	-		Pf6N2E2_5320	0.69	-2.9