Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4905

Experiment: nitrogen source nitrite 5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrite 5mM
5,658,825	+		Pf6N2E2_4904	0.84	-0.6
5,658,825	+		Pf6N2E2_4904	0.84	-0.6
5,658,825	+		Pf6N2E2_4904	0.84	+2.0
5,658,825	+		Pf6N2E2_4904	0.84	-2.2
5,658,825	+		Pf6N2E2_4904	0.84	-0.3
5,658,826	-		Pf6N2E2_4904	0.84	-0.3
5,658,826	-		Pf6N2E2_4904	0.84	+0.0
5,658,826	-		Pf6N2E2_4904	0.84	-1.5
5,658,826	-		Pf6N2E2_4904	0.84	-0.8
5,658,826	-		Pf6N2E2_4904	0.84	-0.6
5,658,826	-				-1.1
5,659,002	+				+0.2
5,659,002	+				-0.9
5,659,003	-				-0.8
5,659,003	-				+0.3
5,659,003	-				-1.0
5,659,080	+				-0.5
5,659,148	+				-0.2
5,659,148	+				-2.0
5,659,148	+				-1.4
5,659,149	-				+0.5
5,659,235	+				-2.3
5,659,235	+				+2.0
5,659,235	+				+0.0
5,659,235	+				-0.1
5,659,235	+				+0.5
5,659,236	-				-0.5
5,659,236	-				+1.0
5,659,236	-				-0.0
5,659,251	+				+2.0
5,659,251	+				-1.0
5,659,297	+				-1.1
5,659,297	+				-0.7
5,659,297	+				-2.4
5,659,297	+				+2.6
5,659,298	-				+0.4
5,659,298	-				-2.7
5,659,298	-				-0.0
5,659,298	-				-0.0
5,659,298	-				-1.1
5,659,298	-				-0.0
5,659,298	-				+3.6
5,659,321	+				-0.6
5,659,321	+				-2.1
5,659,322	-				-0.8
5,659,322	-				-0.1
5,659,413	+				+2.0
5,659,413	+				+0.1
5,659,413	+				+0.8
5,659,414	-				-0.7
5,659,414	-				-0.8
5,659,533	-				+0.2
5,659,714	-				-1.5
5,660,250	+		Pf6N2E2_4905	0.22	+0.7
5,660,250	+		Pf6N2E2_4905	0.22	+0.0
5,660,251	-		Pf6N2E2_4905	0.22	+2.0
5,660,251	-		Pf6N2E2_4905	0.22	-0.4
5,660,251	-		Pf6N2E2_4905	0.22	-0.8
5,660,251	-		Pf6N2E2_4905	0.22	+1.4
5,660,454	+		Pf6N2E2_4905	0.27	-0.0
5,660,455	-		Pf6N2E2_4905	0.27	+1.0
5,660,535	+		Pf6N2E2_4905	0.29	-0.4
5,660,535	+		Pf6N2E2_4905	0.29	-0.3
5,660,535	+		Pf6N2E2_4905	0.29	+1.0
5,660,535	+		Pf6N2E2_4905	0.29	+0.3
5,660,535	+		Pf6N2E2_4905	0.29	-1.3
5,660,536	-		Pf6N2E2_4905	0.29	-1.2
5,660,536	-		Pf6N2E2_4905	0.29	-1.3
5,660,536	-		Pf6N2E2_4905	0.29	+1.0
5,660,536	-		Pf6N2E2_4905	0.29	+0.9
5,660,536	-		Pf6N2E2_4905	0.29	+0.7
5,660,536	-		Pf6N2E2_4905	0.29	-1.2
5,660,536	-		Pf6N2E2_4905	0.29	+0.2
5,661,078	+		Pf6N2E2_4905	0.41	-0.5
5,661,078	+		Pf6N2E2_4905	0.41	+0.3
5,661,079	-		Pf6N2E2_4905	0.42	-0.8
5,661,997	+		Pf6N2E2_4905	0.63	+1.3
5,661,997	+		Pf6N2E2_4905	0.63	+2.8
5,661,997	+		Pf6N2E2_4905	0.63	-0.2
5,661,997	+		Pf6N2E2_4905	0.63	+1.6
5,661,997	+		Pf6N2E2_4905	0.63	-0.9
5,661,998	-		Pf6N2E2_4905	0.63	+2.0
5,661,998	-		Pf6N2E2_4905	0.63	-1.3
5,662,095	+		Pf6N2E2_4905	0.65	+1.0
5,662,096	-		Pf6N2E2_4905	0.65	+1.2
5,662,096	-		Pf6N2E2_4905	0.65	+1.0
5,662,195	-		Pf6N2E2_4905	0.68	+0.3
5,662,258	-		Pf6N2E2_4905	0.69	-0.5
5,662,526	+		Pf6N2E2_4905	0.75	+1.0
5,662,622	+		Pf6N2E2_4905	0.78	+0.1
5,662,622	+		Pf6N2E2_4905	0.78	-2.2
5,662,623	-		Pf6N2E2_4905	0.78	-0.2
5,662,819	-		Pf6N2E2_4905	0.82	+0.9
5,662,819	-		Pf6N2E2_4905	0.82	+0.6
5,662,877	+		Pf6N2E2_4905	0.83	+2.0
5,662,877	+		Pf6N2E2_4905	0.83	+1.0
5,662,877	+		Pf6N2E2_4905	0.83	+0.4
5,662,877	+		Pf6N2E2_4905	0.83	-0.9
5,662,877	+		Pf6N2E2_4905	0.83	+0.5
5,662,878	-		Pf6N2E2_4905	0.83	-1.2
5,662,878	-		Pf6N2E2_4905	0.83	-0.2
5,662,878	-		Pf6N2E2_4905	0.83	-0.2
5,662,878	-		Pf6N2E2_4905	0.83	-1.8
5,662,878	-		Pf6N2E2_4905	0.83	-1.5
5,662,927	+		Pf6N2E2_4905	0.85	+0.9
5,662,927	+		Pf6N2E2_4905	0.85	+0.0
5,662,927	+		Pf6N2E2_4905	0.85	+0.3
5,662,927	+		Pf6N2E2_4905	0.85	-1.0
5,662,927	+		Pf6N2E2_4905	0.85	-1.5
5,662,927	+		Pf6N2E2_4905	0.85	+1.2
5,662,927	+		Pf6N2E2_4905	0.85	+0.4
5,662,927	+		Pf6N2E2_4905	0.85	+0.5
5,662,927	+		Pf6N2E2_4905	0.85	-0.4
5,662,927	+		Pf6N2E2_4905	0.85	+1.2
5,662,928	-		Pf6N2E2_4905	0.85	+0.4
5,662,928	-		Pf6N2E2_4905	0.85	-0.1
5,662,928	-		Pf6N2E2_4905	0.85	-1.0
5,662,928	-		Pf6N2E2_4905	0.85	-0.3
5,662,928	-		Pf6N2E2_4905	0.85	+1.8
5,662,928	-		Pf6N2E2_4905	0.85	+0.4
5,662,928	-		Pf6N2E2_4905	0.85	-1.6
5,663,151	+		Pf6N2E2_4905	0.90	+0.5
5,663,151	+		Pf6N2E2_4905	0.90	+0.5
5,663,152	-		Pf6N2E2_4905	0.90	-1.9
5,663,152	-		Pf6N2E2_4905	0.90	-0.3
5,663,358	+				-1.7
5,663,359	-				-0.3
5,663,359	-				+0.0
5,663,359	-				-0.5
5,663,359	-				+1.1
5,663,614	+		Pf6N2E2_4906	0.36	-0.3
5,663,614	+		Pf6N2E2_4906	0.36	-0.9
5,663,614	+		Pf6N2E2_4906	0.36	+1.2
5,663,615	-		Pf6N2E2_4906	0.37	+2.0
5,663,653	+		Pf6N2E2_4906	0.67	-0.9
5,663,653	+		Pf6N2E2_4906	0.67	-1.9
5,663,653	+		Pf6N2E2_4906	0.67	+0.4
5,663,653	+		Pf6N2E2_4906	0.67	-1.2
5,663,653	+		Pf6N2E2_4906	0.67	-0.0
5,663,653	+		Pf6N2E2_4906	0.67	-2.7
5,663,653	+		Pf6N2E2_4906	0.67	+0.5
5,663,654	-		Pf6N2E2_4906	0.68	-0.3
5,663,654	-		Pf6N2E2_4906	0.68	-2.0
5,663,659	+		Pf6N2E2_4906	0.72	-0.5
5,663,659	+		Pf6N2E2_4906	0.72	+1.0
5,663,659	+		Pf6N2E2_4906	0.72	+1.4
5,663,659	+		Pf6N2E2_4906	0.72	-0.8
5,663,659	+		Pf6N2E2_4906	0.72	+1.0
5,663,659	+		Pf6N2E2_4906	0.72	-0.3
5,663,660	-		Pf6N2E2_4906	0.73	-1.3
5,663,660	-		Pf6N2E2_4906	0.73	-1.4
5,663,690	+				-1.3
5,663,690	+				+0.6
5,663,690	+				+0.7
5,663,690	+				-0.4
5,663,691	-				-2.0
5,663,691	-				+0.5
5,663,691	-				-0.1
5,663,691	-				-0.7
5,663,740	+				+0.2
5,663,741	-				-3.5
5,663,741	-				-1.2
5,663,806	+				-1.1
5,663,806	+				-0.8
5,663,807	-				-1.7
5,663,826	+				-3.6
5,663,827	-				+0.0
5,663,827	-				-2.1
5,663,841	+				-0.7
5,663,841	+				-0.7
5,663,841	+				-1.0
5,663,841	+				+2.0
5,663,841	+				-2.3
5,663,841	+				-1.4
5,663,841	+				-1.8
5,663,842	-				-2.2
5,663,842	-				+2.0
5,663,842	-				-0.6
5,663,842	-				-1.4
5,663,842	-				+0.0
5,663,842	-				-3.5
5,663,846	+				-0.6
5,663,847	-				+1.9
5,664,007	+		Pf6N2E2_4907	0.19	-2.1
5,664,007	+		Pf6N2E2_4907	0.19	-2.6
5,664,007	+		Pf6N2E2_4907	0.19	-1.2
5,664,008	-		Pf6N2E2_4907	0.19	-0.8
5,664,008	-		Pf6N2E2_4907	0.19	-2.1
5,664,010	+		Pf6N2E2_4907	0.19	-0.0
5,664,011	-		Pf6N2E2_4907	0.19	+0.2
5,664,011	-		Pf6N2E2_4907	0.19	-3.2
5,664,011	-		Pf6N2E2_4907	0.19	-2.0
5,664,011	-		Pf6N2E2_4907	0.19	-2.2
5,664,011	-		Pf6N2E2_4907	0.19	-2.0
5,664,134	-		Pf6N2E2_4907	0.34	-2.1
5,664,166	+		Pf6N2E2_4907	0.37	-1.2
5,664,166	+		Pf6N2E2_4907	0.37	-1.1
5,664,457	+		Pf6N2E2_4907	0.71	-1.9
5,664,457	+		Pf6N2E2_4907	0.71	-2.6
5,664,457	+		Pf6N2E2_4907	0.71	-2.0
5,664,457	+		Pf6N2E2_4907	0.71	-2.2
5,664,457	+		Pf6N2E2_4907	0.71	+1.0
5,664,457	+		Pf6N2E2_4907	0.71	-0.7
5,664,457	+		Pf6N2E2_4907	0.71	-1.8
5,664,457	+		Pf6N2E2_4907	0.71	-2.4
5,664,457	+		Pf6N2E2_4907	0.71	-4.1
5,664,457	+		Pf6N2E2_4907	0.71	-2.0
5,664,458	-		Pf6N2E2_4907	0.71	-3.5
5,664,458	-		Pf6N2E2_4907	0.71	-1.6
5,664,458	-		Pf6N2E2_4907	0.71	+0.1
5,664,458	-		Pf6N2E2_4907	0.71	-1.0
5,664,458	-		Pf6N2E2_4907	0.71	-0.1
5,664,463	+		Pf6N2E2_4907	0.71	-1.9
5,664,463	+		Pf6N2E2_4907	0.71	-0.6
5,664,464	-		Pf6N2E2_4907	0.71	-1.9
5,664,483	+		Pf6N2E2_4907	0.74	-1.6
5,664,483	+		Pf6N2E2_4907	0.74	-1.9
5,664,483	+		Pf6N2E2_4907	0.74	-2.0
5,664,483	+		Pf6N2E2_4907	0.74	-1.9
5,664,484	-		Pf6N2E2_4907	0.74	-0.1