Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4817

Experiment: nitrogen source nitrite 5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrite 5mM
5,569,336	+		Pf6N2E2_4816	0.32	-1.3
5,569,337	-		Pf6N2E2_4816	0.32	-1.1
5,569,337	-		Pf6N2E2_4816	0.32	-1.4
5,569,399	+		Pf6N2E2_4816	0.38	-1.4
5,569,400	-		Pf6N2E2_4816	0.38	-1.3
5,569,498	+		Pf6N2E2_4816	0.47	-0.9
5,569,498	+		Pf6N2E2_4816	0.47	-0.1
5,569,498	+		Pf6N2E2_4816	0.47	+0.5
5,569,498	+		Pf6N2E2_4816	0.47	+0.1
5,569,498	+		Pf6N2E2_4816	0.47	-0.3
5,569,499	-		Pf6N2E2_4816	0.48	+0.0
5,569,549	+		Pf6N2E2_4816	0.52	-1.8
5,569,549	+		Pf6N2E2_4816	0.52	-2.7
5,569,549	+		Pf6N2E2_4816	0.52	+0.9
5,569,549	+		Pf6N2E2_4816	0.52	-0.2
5,569,550	-		Pf6N2E2_4816	0.52	+0.5
5,569,556	+		Pf6N2E2_4816	0.53	-1.5
5,569,752	+		Pf6N2E2_4816	0.72	+0.1
5,569,753	-		Pf6N2E2_4816	0.72	-2.0
5,569,756	+		Pf6N2E2_4816	0.72	-0.2
5,569,756	+		Pf6N2E2_4816	0.72	-0.7
5,569,757	-		Pf6N2E2_4816	0.72	-3.2
5,569,861	+		Pf6N2E2_4816	0.82	-0.6
5,569,861	+		Pf6N2E2_4816	0.82	-0.6
5,569,861	+		Pf6N2E2_4816	0.82	-0.6
5,569,861	+		Pf6N2E2_4816	0.82	+0.5
5,569,862	-		Pf6N2E2_4816	0.82	-0.2
5,569,862	-		Pf6N2E2_4816	0.82	+1.0
5,569,862	-		Pf6N2E2_4816	0.82	-0.1
5,569,879	+		Pf6N2E2_4816	0.84	+0.1
5,570,045	-				-1.0
5,570,045	-				-1.7
5,570,045	-				+0.5
5,570,243	+				-1.0
5,570,243	+				-0.3
5,570,531	+		Pf6N2E2_4817	0.21	-2.7
5,570,532	-		Pf6N2E2_4817	0.21	-0.8
5,570,681	+		Pf6N2E2_4817	0.33	-3.1
5,570,681	+		Pf6N2E2_4817	0.33	-1.9
5,570,681	+		Pf6N2E2_4817	0.33	-3.3
5,570,682	-		Pf6N2E2_4817	0.33	-3.1
5,570,682	-		Pf6N2E2_4817	0.33	-2.0
5,570,682	-		Pf6N2E2_4817	0.33	-0.7
5,570,682	-		Pf6N2E2_4817	0.33	-0.8
5,570,729	+		Pf6N2E2_4817	0.37	+0.5
5,570,771	+		Pf6N2E2_4817	0.40	+2.0
5,570,772	-		Pf6N2E2_4817	0.40	+0.5
5,570,774	+		Pf6N2E2_4817	0.40	-1.4
5,570,774	+		Pf6N2E2_4817	0.40	+0.0
5,570,774	+		Pf6N2E2_4817	0.40	-0.8
5,570,774	+		Pf6N2E2_4817	0.40	-3.4
5,570,775	-		Pf6N2E2_4817	0.40	-0.3
5,570,775	-		Pf6N2E2_4817	0.40	-2.9
5,570,831	-		Pf6N2E2_4817	0.45	+2.0
5,570,849	+		Pf6N2E2_4817	0.46	-2.0
5,570,849	+		Pf6N2E2_4817	0.46	-0.5
5,570,849	+		Pf6N2E2_4817	0.46	-3.0
5,570,849	+		Pf6N2E2_4817	0.46	+0.5
5,570,850	-		Pf6N2E2_4817	0.46	+0.9
5,570,850	-		Pf6N2E2_4817	0.46	-1.3
5,570,850	-		Pf6N2E2_4817	0.46	-2.0
5,570,850	-		Pf6N2E2_4817	0.46	+0.0
5,570,858	-		Pf6N2E2_4817	0.47	+0.0
5,570,918	+		Pf6N2E2_4817	0.52	-0.4
5,570,930	+		Pf6N2E2_4817	0.53	-2.9
5,571,058	+		Pf6N2E2_4817	0.63	-2.7
5,571,058	+		Pf6N2E2_4817	0.63	-3.3
5,571,058	+		Pf6N2E2_4817	0.63	-3.4
5,571,058	+		Pf6N2E2_4817	0.63	-2.3
5,571,059	-		Pf6N2E2_4817	0.63	+0.0
5,571,091	+		Pf6N2E2_4817	0.66	-2.0
5,571,128	+		Pf6N2E2_4817	0.69	-3.3
5,571,128	+		Pf6N2E2_4817	0.69	+2.0
5,571,128	+		Pf6N2E2_4817	0.69	-1.3
5,571,128	+		Pf6N2E2_4817	0.69	-4.4
5,571,128	+		Pf6N2E2_4817	0.69	+2.0
5,571,128	+		Pf6N2E2_4817	0.69	-1.0
5,571,128	+		Pf6N2E2_4817	0.69	-3.6
5,571,128	+		Pf6N2E2_4817	0.69	+2.0
5,571,128	+		Pf6N2E2_4817	0.69	-1.8
5,571,128	+		Pf6N2E2_4817	0.69	+2.0
5,571,128	+		Pf6N2E2_4817	0.69	-3.0
5,571,128	+		Pf6N2E2_4817	0.69	-2.1
5,571,128	+		Pf6N2E2_4817	0.69	+1.2
5,571,128	+		Pf6N2E2_4817	0.69	-3.4
5,571,128	+		Pf6N2E2_4817	0.69	-1.3
5,571,128	+		Pf6N2E2_4817	0.69	-3.4
5,571,128	+		Pf6N2E2_4817	0.69	-2.6
5,571,128	+		Pf6N2E2_4817	0.69	-0.3
5,571,128	+		Pf6N2E2_4817	0.69	-0.6
5,571,128	+		Pf6N2E2_4817	0.69	-1.1
5,571,128	+		Pf6N2E2_4817	0.69	-1.1
5,571,128	+		Pf6N2E2_4817	0.69	+0.0
5,571,129	-		Pf6N2E2_4817	0.69	+1.0
5,571,129	-		Pf6N2E2_4817	0.69	+2.0
5,571,129	-		Pf6N2E2_4817	0.69	+0.0
5,571,129	-		Pf6N2E2_4817	0.69	-0.8
5,571,129	-		Pf6N2E2_4817	0.69	+0.5
5,571,129	-		Pf6N2E2_4817	0.69	-4.4
5,571,129	-		Pf6N2E2_4817	0.69	-3.5
5,571,129	-		Pf6N2E2_4817	0.69	-2.7
5,571,129	-		Pf6N2E2_4817	0.69	-2.5
5,571,129	-		Pf6N2E2_4817	0.69	-0.5
5,571,129	-		Pf6N2E2_4817	0.69	-2.4
5,571,129	-		Pf6N2E2_4817	0.69	+0.5
5,571,129	-		Pf6N2E2_4817	0.69	-2.8
5,571,176	+		Pf6N2E2_4817	0.72	-1.1
5,571,176	+		Pf6N2E2_4817	0.72	-2.0
5,571,176	+		Pf6N2E2_4817	0.72	+2.0
5,571,176	+		Pf6N2E2_4817	0.72	-4.0
5,571,206	+		Pf6N2E2_4817	0.75	-0.3
5,571,206	+		Pf6N2E2_4817	0.75	-2.9
5,571,206	+		Pf6N2E2_4817	0.75	-2.2
5,571,206	+		Pf6N2E2_4817	0.75	-1.6
5,571,206	+		Pf6N2E2_4817	0.75	-0.6
5,571,206	+		Pf6N2E2_4817	0.75	-2.9
5,571,206	+		Pf6N2E2_4817	0.75	-0.7
5,571,206	+		Pf6N2E2_4817	0.75	-1.3
5,571,206	+		Pf6N2E2_4817	0.75	-3.8
5,571,206	+		Pf6N2E2_4817	0.75	-2.5
5,571,206	+		Pf6N2E2_4817	0.75	+0.5
5,571,206	+		Pf6N2E2_4817	0.75	-0.7
5,571,206	+		Pf6N2E2_4817	0.75	+0.5
5,571,206	+		Pf6N2E2_4817	0.75	-1.2
5,571,207	-		Pf6N2E2_4817	0.75	-1.9
5,571,207	-		Pf6N2E2_4817	0.75	-1.0
5,571,207	-		Pf6N2E2_4817	0.75	-2.1
5,571,207	-		Pf6N2E2_4817	0.75	-0.8
5,571,207	-		Pf6N2E2_4817	0.75	-1.6
5,571,207	-		Pf6N2E2_4817	0.75	-2.1
5,571,207	-		Pf6N2E2_4817	0.75	-1.2
5,571,207	-		Pf6N2E2_4817	0.75	-0.8
5,571,207	-		Pf6N2E2_4817	0.75	-0.4
5,571,207	-		Pf6N2E2_4817	0.75	-2.2
5,571,207	-		Pf6N2E2_4817	0.75	-2.7
5,571,207	-		Pf6N2E2_4817	0.75	-4.3
5,571,207	-		Pf6N2E2_4817	0.75	-2.4
5,571,208	+		Pf6N2E2_4817	0.75	+1.0
5,571,208	+		Pf6N2E2_4817	0.75	-3.2
5,571,208	+		Pf6N2E2_4817	0.75	-1.3
5,571,208	+		Pf6N2E2_4817	0.75	-2.1
5,571,209	-		Pf6N2E2_4817	0.75	-0.3
5,571,209	-		Pf6N2E2_4817	0.75	-2.3
5,571,209	-		Pf6N2E2_4817	0.75	-1.7
5,571,263	+		Pf6N2E2_4817	0.79	+1.0
5,571,263	+		Pf6N2E2_4817	0.79	-1.5
5,571,264	-		Pf6N2E2_4817	0.79	-0.3
5,571,278	+		Pf6N2E2_4817	0.81	-4.6
5,571,278	+		Pf6N2E2_4817	0.81	-3.4
5,571,279	-		Pf6N2E2_4817	0.81	+1.2
5,571,279	-		Pf6N2E2_4817	0.81	-0.1
5,571,279	-		Pf6N2E2_4817	0.81	-2.1
5,571,332	+		Pf6N2E2_4817	0.85	-3.1
5,571,332	+		Pf6N2E2_4817	0.85	-0.9
5,571,332	+		Pf6N2E2_4817	0.85	-0.4
5,571,333	-		Pf6N2E2_4817	0.85	-0.3
5,571,333	-		Pf6N2E2_4817	0.85	-1.5
5,571,333	-		Pf6N2E2_4817	0.85	-0.3
5,571,333	-		Pf6N2E2_4817	0.85	-0.8
5,571,333	-		Pf6N2E2_4817	0.85	-2.9
5,571,333	-		Pf6N2E2_4817	0.85	-0.3
5,571,333	-		Pf6N2E2_4817	0.85	-2.2
5,571,333	-		Pf6N2E2_4817	0.85	-0.8
5,571,333	-		Pf6N2E2_4817	0.85	-2.4
5,571,333	-		Pf6N2E2_4817	0.85	-0.3
5,571,380	+		Pf6N2E2_4817	0.89	-0.5
5,571,380	+		Pf6N2E2_4817	0.89	-0.8
5,571,380	+		Pf6N2E2_4817	0.89	+0.5
5,571,380	+		Pf6N2E2_4817	0.89	-2.7
5,571,380	+		Pf6N2E2_4817	0.89	-1.5
5,571,380	+		Pf6N2E2_4817	0.89	-3.6
5,571,381	-		Pf6N2E2_4817	0.89	+0.0
5,571,381	-		Pf6N2E2_4817	0.89	-0.5
5,571,381	-		Pf6N2E2_4817	0.89	+1.0
5,571,395	+		Pf6N2E2_4817	0.90	-4.2
5,571,395	+		Pf6N2E2_4817	0.90	-1.9
5,571,395	+		Pf6N2E2_4817	0.90	-0.5
5,571,396	-				-0.7
5,571,396	-				-3.7
5,571,470	+				-1.1
5,571,470	+				-0.6
5,571,470	+				-1.9
5,571,470	+				-2.3
5,571,471	-				-0.3
5,571,471	-				+2.0
5,571,471	-				-0.3
5,571,479	+				-0.5
5,571,479	+				+1.0
5,571,479	+				+1.0
5,571,479	+				-1.3
5,571,479	+				-3.9
5,571,546	+				+2.5
5,571,546	+				-3.0
5,571,546	+				+2.0
5,571,546	+				-1.2
5,571,546	+				-0.5
5,571,546	+				-0.9
5,571,546	+				-0.7
5,571,546	+				+0.3
5,571,546	+				-0.5
5,571,546	+				-1.1
5,571,547	-				-2.6
5,571,547	-				+2.0
5,571,547	-				-1.7
5,571,547	-				-3.0
5,571,547	-				+1.0
5,571,547	-				-1.4
5,571,547	-				-3.4
5,571,576	+				-1.1
5,571,576	+				+1.0
5,571,576	+				+0.5
5,571,576	+				-0.9
5,571,577	-				+2.0
5,571,577	-				-0.0
5,571,577	-				-1.1
5,571,675	+		Pf6N2E2_4818	0.16	-1.2
5,571,705	+		Pf6N2E2_4818	0.19	-0.6
5,571,705	+		Pf6N2E2_4818	0.19	+0.4
5,571,706	-		Pf6N2E2_4818	0.19	+1.0
5,571,912	+		Pf6N2E2_4818	0.45	-1.1
5,571,913	-		Pf6N2E2_4818	0.45	-1.1
5,571,913	-		Pf6N2E2_4818	0.45	-1.1
5,571,913	-		Pf6N2E2_4818	0.45	-3.7
5,571,913	-		Pf6N2E2_4818	0.45	-1.2
5,571,985	+		Pf6N2E2_4818	0.54	+0.0
5,571,985	+		Pf6N2E2_4818	0.54	-1.4
5,571,986	-		Pf6N2E2_4818	0.54	-2.3
5,571,986	-		Pf6N2E2_4818	0.54	+0.3
5,572,343	+				+2.0
5,572,343	+				+0.0
5,572,344	-				-2.3
5,572,347	-				-0.1
5,572,363	+				+1.2
5,572,363	+				-0.5
5,572,390	-				-0.5
5,572,457	+				+0.0
5,572,457	+				-1.7
5,572,483	+				+0.2
5,572,484	-				-0.3
5,572,484	-				-0.4