Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS19065

Experiment: 4-Acetoxy-3-methoxycinnamic 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Acetoxy-3-methoxycinnamic 2 mM (C)
4,310,547	-				-0.7
4,310,547	-				+0.8
4,310,547	-				-0.8
4,310,547	-				+0.8
4,310,638	+				-1.3
4,310,638	+				+0.5
4,310,638	+				-0.3
4,310,638	+				+0.7
4,310,638	+				+0.7
4,310,638	+				-1.7
4,310,638	+				+1.0
4,310,638	+				+1.3
4,310,638	+				+2.6
4,310,638	+				-1.8
4,310,638	+				-0.3
4,310,638	+				-2.3
4,310,638	+				-1.7
4,310,638	+				-1.8
4,310,638	+				-0.3
4,310,638	+				-0.8
4,310,638	+				+0.8
4,310,638	+				-1.7
4,310,638	+				+0.2
4,310,638	+				+1.3
4,310,638	+				-1.5
4,310,638	+				+0.3
4,310,638	+				+1.3
4,310,638	+				+1.0
4,310,638	+				-0.3
4,310,638	+				-1.5
4,310,638	+				+3.5
4,310,638	+				-2.1
4,310,638	+				+0.8
4,310,638	+				+0.0
4,310,638	+				+0.3
4,310,638	+				-0.4
4,310,638	+				+2.5
4,310,638	+				+0.1
4,310,639	-				-0.4
4,310,639	-				+1.4
4,310,639	-				+1.1
4,310,639	-				-0.3
4,310,639	-				-0.3
4,310,639	-				-2.5
4,310,639	-				-1.5
4,310,639	-				+1.6
4,310,639	-				+1.3
4,310,639	-				+0.0
4,310,639	-				+0.9
4,310,639	-				+0.9
4,310,639	-				+1.8
4,310,639	-				-0.5
4,310,639	-				+1.2
4,310,639	-				-2.5
4,310,639	-				+2.3
4,310,639	-				-1.8
4,310,639	-				-1.0
4,310,639	-				+1.3
4,310,639	-				-0.7
4,310,639	-				+3.3
4,310,639	-				+0.3
4,310,642	+				+1.6
4,310,642	+				-0.1
4,310,642	+				-0.1
4,310,643	-				-0.1
4,310,658	+				-0.3
4,310,658	+				-1.3
4,310,658	+				-0.4
4,310,658	+				-0.1
4,310,658	+				-0.8
4,310,658	+				-0.3
4,310,658	+				-0.1
4,310,658	+				-0.2
4,310,659	-				+0.5
4,311,180	-				+1.5
4,311,180	-				+1.2
4,311,180	-				+1.0
4,311,264	+				+1.7
4,311,264	+				+0.6
4,311,264	+				+0.7
4,311,264	+				+0.3
4,311,264	+				-2.8
4,311,264	+				+0.6
4,311,264	+				+2.3
4,311,268	+				+0.4
4,311,268	+				+0.5
4,311,268	+				-0.3
4,311,268	+				+0.4
4,311,363	+				-1.2
4,311,370	+				+0.0
4,311,370	+				+0.5
4,311,370	+				+1.0
4,311,453	-				-0.7
4,311,453	-				+1.9
4,311,453	-				-1.3
4,311,453	-				+0.0
4,311,570	+				-2.1
4,311,570	+				-0.5
4,311,570	+				-0.7
4,311,570	+				+0.9
4,311,570	+				-1.8
4,311,571	-				-0.5
4,311,571	-				-0.1
4,311,571	-				+0.8
4,311,571	-				+0.9
4,311,571	-				+0.7
4,311,666	+		PFLU_RS19065	0.17	-1.6
4,311,666	+		PFLU_RS19065	0.17	-0.9
4,311,667	-		PFLU_RS19065	0.17	-2.9
4,311,668	+		PFLU_RS19065	0.17	-0.4
4,311,668	+		PFLU_RS19065	0.17	-0.7
4,311,668	+		PFLU_RS19065	0.17	+0.4
4,311,668	+		PFLU_RS19065	0.17	+0.5
4,311,669	-		PFLU_RS19065	0.17	-1.6
4,311,669	-		PFLU_RS19065	0.17	-0.4
4,311,669	-		PFLU_RS19065	0.17	-1.1
4,311,669	-		PFLU_RS19065	0.17	-1.6
4,311,669	-		PFLU_RS19065	0.17	+0.3
4,311,669	-		PFLU_RS19065	0.17	+0.8
4,311,721	+		PFLU_RS19065	0.25	+0.6
4,311,721	+		PFLU_RS19065	0.25	+1.6
4,312,007	+		PFLU_RS19065	0.65	+0.2
4,312,007	+		PFLU_RS19065	0.65	+1.6
4,312,007	+		PFLU_RS19065	0.65	+0.8
4,312,007	+		PFLU_RS19065	0.65	-2.3
4,312,007	+		PFLU_RS19065	0.65	-0.4
4,312,007	+		PFLU_RS19065	0.65	-0.5
4,312,007	+		PFLU_RS19065	0.65	+1.1
4,312,007	+		PFLU_RS19065	0.65	+0.1
4,312,007	+		PFLU_RS19065	0.65	-0.4
4,312,007	+		PFLU_RS19065	0.65	-1.8
4,312,007	+		PFLU_RS19065	0.65	+0.0
4,312,007	+		PFLU_RS19065	0.65	-0.4
4,312,007	+		PFLU_RS19065	0.65	+1.1
4,312,007	+		PFLU_RS19065	0.65	+0.8
4,312,007	+		PFLU_RS19065	0.65	-0.7
4,312,007	+		PFLU_RS19065	0.65	-1.4
4,312,008	-		PFLU_RS19065	0.65	+0.7
4,312,008	-		PFLU_RS19065	0.65	-1.6
4,312,008	-		PFLU_RS19065	0.65	+1.2
4,312,008	-		PFLU_RS19065	0.65	-1.8
4,312,008	-		PFLU_RS19065	0.65	-1.0
4,312,008	-		PFLU_RS19065	0.65	-0.1
4,312,008	-		PFLU_RS19065	0.65	+1.0
4,312,008	-		PFLU_RS19065	0.65	+2.5
4,312,008	-		PFLU_RS19065	0.65	+1.1
4,312,008	-		PFLU_RS19065	0.65	-0.7
4,312,008	-		PFLU_RS19065	0.65	-2.4
4,312,008	-		PFLU_RS19065	0.65	+0.0
4,312,008	-		PFLU_RS19065	0.65	+1.9
4,312,008	-		PFLU_RS19065	0.65	-1.2
4,312,008	-		PFLU_RS19065	0.65	+1.3
4,312,008	-		PFLU_RS19065	0.65	-0.6
4,312,008	-		PFLU_RS19065	0.65	+0.4
4,312,008	-		PFLU_RS19065	0.65	+0.1
4,312,008	-		PFLU_RS19065	0.65	-1.0
4,312,008	-		PFLU_RS19065	0.65	-2.7
4,312,022	+		PFLU_RS19065	0.67	-0.5
4,312,022	+		PFLU_RS19065	0.67	+1.3
4,312,023	-		PFLU_RS19065	0.67	-1.6
4,312,023	-		PFLU_RS19065	0.67	+1.1
4,312,227	+				+2.7
4,312,227	+				-0.1
4,312,227	+				-0.8
4,312,227	+				+1.1
4,312,227	+				+0.3
4,312,227	+				-0.1
4,312,227	+				-1.3
4,312,227	+				+0.3
4,312,228	-				-0.7
4,312,228	-				+0.1
4,312,228	-				+1.7
4,312,228	-				-0.7
4,312,266	+				-0.1
4,312,267	-				+1.0
4,312,292	-				-0.2
4,312,292	-				-0.3
4,312,319	+				-2.8
4,312,319	+				-2.3
4,312,320	-				-0.3
4,312,322	-				+1.0
4,312,730	-		PFLU_RS19070	0.44	-0.1
4,312,730	-		PFLU_RS19070	0.44	+0.8
4,312,730	-		PFLU_RS19070	0.44	-3.3
4,312,730	-		PFLU_RS19070	0.44	+1.2
4,312,730	-		PFLU_RS19070	0.44	-0.2
4,312,861	+		PFLU_RS19070	0.59	-0.7
4,312,873	-		PFLU_RS19070	0.60	+1.6
4,313,086	-		PFLU_RS19070	0.85	-0.7
4,313,086	-		PFLU_RS19070	0.85	-1.9
4,313,135	-				-2.4
4,313,135	-				+1.7