Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS17855

Experiment: 4-Acetoxy-3-methoxycinnamic 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Acetoxy-3-methoxycinnamic 2 mM (C)
4,054,295	-		PFLU_RS17845	0.89	-0.2
4,054,342	+				-0.8
4,054,351	+				-0.2
4,054,351	+				+1.0
4,054,352	-				+0.8
4,054,352	-				+0.4
4,054,505	+				+0.5
4,054,505	+				-0.5
4,054,505	+				-0.5
4,054,505	+				-2.6
4,054,505	+				-1.8
4,054,505	+				-1.3
4,054,505	+				-0.3
4,054,505	+				+1.0
4,054,506	-				-1.3
4,054,506	-				+0.1
4,054,506	-				+0.1
4,054,506	-				+1.7
4,054,506	-				-1.8
4,054,506	-				+1.2
4,054,506	-				+1.6
4,054,506	-				-1.8
4,054,509	+				-0.8
4,054,509	+				-0.9
4,054,509	+				-0.5
4,054,509	+				+1.7
4,054,509	+				-3.0
4,054,510	-				-0.3
4,054,717	-		PFLU_RS17850	0.26	-0.8
4,054,758	+		PFLU_RS17850	0.32	+0.2
4,054,867	+		PFLU_RS17850	0.46	+0.2
4,054,867	+		PFLU_RS17850	0.46	-0.8
4,054,916	+		PFLU_RS17850	0.52	+0.4
4,054,917	-		PFLU_RS17850	0.52	+0.0
4,055,112	+		PFLU_RS17850	0.78	+0.4
4,055,113	-		PFLU_RS17850	0.78	-2.5
4,055,249	+				+0.4
4,055,249	+				+2.0
4,055,249	+				-1.1
4,055,249	+				+0.2
4,055,250	-				-0.9
4,055,250	-				-1.5
4,055,250	-				-1.9
4,055,250	-				+1.0
4,055,250	-				-0.3
4,055,250	-				-0.6
4,055,250	-				-2.1
4,055,250	-				-1.1
4,055,390	+		PFLU_RS17855	0.17	-1.8
4,055,450	+		PFLU_RS17855	0.26	-0.1
4,055,511	+		PFLU_RS17855	0.36	-1.6
4,055,512	-		PFLU_RS17855	0.36	-3.5
4,055,512	-		PFLU_RS17855	0.36	+0.9
4,055,512	-		PFLU_RS17855	0.36	+1.0
4,055,512	-		PFLU_RS17855	0.36	+2.2
4,055,562	-		PFLU_RS17855	0.44	-0.8
4,055,660	-		PFLU_RS17855	0.59	-2.3
4,055,909	+				+0.5
4,055,909	+				+1.7
4,055,909	+				-0.4
4,055,909	+				+0.9
4,055,910	-				+1.2
4,055,910	-				+3.6
4,055,910	-				+0.1
4,055,910	-				-0.1
4,055,910	-				+1.2
4,056,030	+				+0.8
4,056,031	-				+0.8
4,056,143	+		PFLU_RS17860	0.18	+1.9
4,056,143	+		PFLU_RS17860	0.18	+0.2
4,056,191	+		PFLU_RS17860	0.22	-0.7
4,056,191	+		PFLU_RS17860	0.22	+1.2
4,056,191	+		PFLU_RS17860	0.22	-2.1
4,056,191	+		PFLU_RS17860	0.22	+1.4
4,056,191	+		PFLU_RS17860	0.22	+0.1
4,056,192	-		PFLU_RS17860	0.22	-2.1
4,056,192	-		PFLU_RS17860	0.22	+0.1
4,056,192	-		PFLU_RS17860	0.22	+0.4
4,056,192	-		PFLU_RS17860	0.22	-0.8
4,056,192	-		PFLU_RS17860	0.22	+0.2
4,056,192	-		PFLU_RS17860	0.22	-1.3
4,056,192	-		PFLU_RS17860	0.22	-0.3
4,056,192	-		PFLU_RS17860	0.22	+0.0
4,056,314	+		PFLU_RS17860	0.33	-0.3
4,056,314	+		PFLU_RS17860	0.33	+0.7
4,056,314	+		PFLU_RS17860	0.33	-1.1
4,056,315	-		PFLU_RS17860	0.33	-1.1
4,056,315	-		PFLU_RS17860	0.33	+0.4
4,056,315	-		PFLU_RS17860	0.33	+0.1
4,056,315	-		PFLU_RS17860	0.33	+0.8
4,056,335	+		PFLU_RS17860	0.35	-1.3
4,056,335	+		PFLU_RS17860	0.35	+1.7
4,056,336	-		PFLU_RS17860	0.35	-1.1
4,056,344	+		PFLU_RS17860	0.36	+1.8
4,056,345	-		PFLU_RS17860	0.36	+0.2
4,056,345	-		PFLU_RS17860	0.36	-0.8
4,056,345	-		PFLU_RS17860	0.36	-1.6
4,056,368	+		PFLU_RS17860	0.38	+0.0
4,056,368	+		PFLU_RS17860	0.38	-0.3
4,056,368	+		PFLU_RS17860	0.38	-2.4
4,056,368	+		PFLU_RS17860	0.38	+2.8
4,056,368	+		PFLU_RS17860	0.38	-0.6
4,056,369	-		PFLU_RS17860	0.38	+1.9
4,056,369	-		PFLU_RS17860	0.38	-1.1
4,056,422	+		PFLU_RS17860	0.43	-0.8
4,056,423	-		PFLU_RS17860	0.43	+0.6
4,056,623	+		PFLU_RS17860	0.61	-0.3
4,056,624	-		PFLU_RS17860	0.61	+0.2
4,056,624	-		PFLU_RS17860	0.61	-0.3
4,056,624	-		PFLU_RS17860	0.61	-1.8
4,056,631	+		PFLU_RS17860	0.61	+0.1
4,056,631	+		PFLU_RS17860	0.61	+1.0
4,056,631	+		PFLU_RS17860	0.61	-0.8
4,056,631	+		PFLU_RS17860	0.61	-1.1
4,056,631	+		PFLU_RS17860	0.61	+1.2
4,056,632	-		PFLU_RS17860	0.62	-2.9
4,056,632	-		PFLU_RS17860	0.62	+0.1
4,056,698	+		PFLU_RS17860	0.67	+0.5
4,056,704	+		PFLU_RS17860	0.68	+2.7
4,056,804	+		PFLU_RS17860	0.77	-0.2
4,056,804	+		PFLU_RS17860	0.77	+1.2
4,056,806	+		PFLU_RS17860	0.77	-0.5
4,056,806	+		PFLU_RS17860	0.77	+0.2
4,056,806	+		PFLU_RS17860	0.77	-0.1
4,056,806	+		PFLU_RS17860	0.77	+0.6
4,056,807	-		PFLU_RS17860	0.77	-1.1
4,056,807	-		PFLU_RS17860	0.77	+0.7
4,056,807	-		PFLU_RS17860	0.77	+0.3
4,056,807	-		PFLU_RS17860	0.77	-1.1
4,056,807	-		PFLU_RS17860	0.77	-2.9
4,056,807	-		PFLU_RS17860	0.77	+1.2
4,056,807	-		PFLU_RS17860	0.77	+0.2
4,056,846	+		PFLU_RS17860	0.81	-1.8
4,056,847	-		PFLU_RS17860	0.81	-0.8
4,056,847	-		PFLU_RS17860	0.81	-0.6
4,056,847	-		PFLU_RS17860	0.81	-0.1
4,056,847	-		PFLU_RS17860	0.81	+0.3
4,056,849	-		PFLU_RS17860	0.81	+1.2