Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS10630

Experiment: 4-Acetoxy-3-methoxycinnamic 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Acetoxy-3-methoxycinnamic 2 mM (C)
2,341,824	-		PFLU_RS10625	0.48	-1.8
2,341,836	-		PFLU_RS10625	0.49	+0.9
2,342,124	+		PFLU_RS10625	0.66	+1.0
2,342,125	-		PFLU_RS10625	0.66	+1.3
2,342,388	+		PFLU_RS10625	0.82	+0.3
2,342,388	+		PFLU_RS10625	0.82	+1.0
2,342,388	+		PFLU_RS10625	0.82	+0.9
2,342,388	+		PFLU_RS10625	0.82	+0.3
2,342,388	+		PFLU_RS10625	0.82	+1.2
2,342,388	+		PFLU_RS10625	0.82	+0.8
2,342,388	+		PFLU_RS10625	0.82	+0.1
2,342,388	+		PFLU_RS10625	0.82	-2.1
2,342,388	+		PFLU_RS10625	0.82	-1.4
2,342,388	+		PFLU_RS10625	0.82	+0.0
2,342,389	-		PFLU_RS10625	0.82	-1.7
2,342,389	-		PFLU_RS10625	0.82	+0.1
2,342,389	-		PFLU_RS10625	0.82	-1.3
2,342,389	-		PFLU_RS10625	0.82	+0.5
2,342,389	-		PFLU_RS10625	0.82	+1.3
2,342,389	-		PFLU_RS10625	0.82	+2.7
2,342,389	-		PFLU_RS10625	0.82	-1.7
2,342,389	-		PFLU_RS10625	0.82	+0.9
2,342,389	-		PFLU_RS10625	0.82	+1.9
2,342,439	+		PFLU_RS10625	0.85	-0.6
2,342,524	-				+0.2
2,342,524	-				-2.0
2,342,550	+				-0.5
2,342,550	+				-1.6
2,342,645	+				-1.7
2,342,645	+				+0.3
2,342,655	+				-0.3
2,342,655	+				-0.0
2,342,655	+				-1.0
2,342,655	+				+0.5
2,342,655	+				+0.9
2,342,655	+				-0.4
2,342,655	+				+1.3
2,342,655	+				+1.9
2,342,655	+				+0.0
2,342,655	+				+1.7
2,342,655	+				-2.0
2,342,655	+				-0.4
2,342,655	+				-1.5
2,342,656	-				-1.0
2,342,656	-				-0.3
2,342,656	-				-0.7
2,342,656	-				-0.7
2,342,656	-				+0.3
2,342,656	-				+0.3
2,342,656	-				+0.6
2,342,656	-				-1.0
2,342,656	-				+0.7
2,342,662	-				-1.0
2,342,662	-				+1.2
2,342,720	+				+1.5
2,342,720	+				+0.5
2,342,720	+				-1.3
2,342,720	+				+1.6
2,342,720	+				+0.7
2,342,720	+				+0.6
2,342,720	+				+0.2
2,342,721	-				-0.7
2,342,837	+				+0.3
2,342,921	-		PFLU_RS10630	0.12	+0.9
2,342,979	-		PFLU_RS10630	0.19	+0.3
2,343,305	+		PFLU_RS10630	0.55	-0.4
2,343,305	+		PFLU_RS10630	0.55	+1.3
2,343,306	-		PFLU_RS10630	0.55	+0.6
2,343,321	-		PFLU_RS10630	0.57	-0.8
2,343,321	-		PFLU_RS10630	0.57	+0.7
2,343,321	-		PFLU_RS10630	0.57	+1.6
2,343,321	-		PFLU_RS10630	0.57	+0.0
2,343,383	+		PFLU_RS10630	0.64	-1.4
2,343,383	+		PFLU_RS10630	0.64	-1.2
2,343,384	-		PFLU_RS10630	0.64	+0.3
2,343,384	-		PFLU_RS10630	0.64	-1.0
2,343,384	-		PFLU_RS10630	0.64	+0.7
2,343,590	+		PFLU_RS10630	0.87	-1.5
2,343,590	+		PFLU_RS10630	0.87	-1.5
2,343,590	+		PFLU_RS10630	0.87	-0.3
2,343,591	-		PFLU_RS10630	0.87	-2.1
2,343,619	+				-1.4
2,343,619	+				+0.3
2,343,619	+				+0.4
2,343,619	+				-0.7
2,343,619	+				+0.7
2,343,619	+				-0.1
2,343,619	+				-0.3
2,343,619	+				+0.2
2,343,619	+				+1.9
2,343,619	+				-0.1
2,343,619	+				-0.9
2,343,619	+				+1.3
2,343,619	+				+0.6
2,343,619	+				-2.4
2,343,619	+				-1.2
2,343,619	+				-0.3
2,343,620	-				+2.6
2,343,620	-				-1.7
2,343,620	-				+1.9
2,343,620	-				+0.4
2,343,620	-				+0.2
2,343,620	-				+0.8
2,343,620	-				+0.8
2,343,620	-				-0.9
2,343,620	-				-1.1
2,343,620	-				+0.2
2,343,620	-				-1.1
2,343,620	-				+0.6
2,343,620	-				-1.7
2,343,620	-				-2.1
2,343,620	-				+2.7
2,343,620	-				-0.8
2,343,620	-				-0.4
2,343,620	-				+1.0
2,343,620	-				+1.0
2,343,650	+				-1.1
2,343,650	+				+2.1
2,343,650	+				-1.3
2,343,650	+				+0.9
2,343,650	+				-0.1
2,343,650	+				+1.3
2,343,651	-				+0.0
2,343,651	-				-1.0
2,343,651	-				-2.8
2,343,651	-				+0.5
2,343,651	-				-0.3
2,343,721	+				-1.0
2,343,721	+				+0.3
2,343,721	+				-0.7
2,343,722	-				-1.7
2,343,722	-				+0.9
2,343,840	-				+1.3
2,343,840	-				-0.3
2,343,840	-				-0.3
2,343,966	-		PFLU_RS10635	0.18	+1.8
2,343,978	-		PFLU_RS10635	0.20	+0.6
2,344,134	+		PFLU_RS10635	0.34	+0.6
2,344,134	+		PFLU_RS10635	0.34	+0.7
2,344,134	+		PFLU_RS10635	0.34	+0.3
2,344,286	+		PFLU_RS10635	0.48	-1.3
2,344,286	+		PFLU_RS10635	0.48	+0.1
2,344,287	-		PFLU_RS10635	0.48	-1.8
2,344,287	-		PFLU_RS10635	0.48	-0.3
2,344,287	-		PFLU_RS10635	0.48	-0.8
2,344,287	-		PFLU_RS10635	0.48	-1.9
2,344,287	-		PFLU_RS10635	0.48	+0.6
2,344,287	-		PFLU_RS10635	0.48	-1.3
2,344,287	-		PFLU_RS10635	0.48	-1.0
2,344,287	-		PFLU_RS10635	0.48	+0.3
2,344,523	+		PFLU_RS10635	0.69	-1.7
2,344,523	+		PFLU_RS10635	0.69	-1.7
2,344,524	-		PFLU_RS10635	0.69	-1.8
2,344,524	-		PFLU_RS10635	0.69	+0.9
2,344,524	-		PFLU_RS10635	0.69	-0.9
2,344,524	-		PFLU_RS10635	0.69	-0.8
2,344,527	+		PFLU_RS10635	0.70	-2.4
2,344,527	+		PFLU_RS10635	0.70	+1.1
2,344,527	+		PFLU_RS10635	0.70	-0.5
2,344,527	+		PFLU_RS10635	0.70	+1.7
2,344,528	-		PFLU_RS10635	0.70	+3.6
2,344,528	-		PFLU_RS10635	0.70	+0.1
2,344,565	+		PFLU_RS10635	0.73	-1.2
2,344,565	+		PFLU_RS10635	0.73	+0.7
2,344,566	-		PFLU_RS10635	0.73	+1.3
2,344,566	-		PFLU_RS10635	0.73	+1.1
2,344,566	-		PFLU_RS10635	0.73	-0.1
2,344,566	-		PFLU_RS10635	0.73	-1.0
2,344,577	+		PFLU_RS10635	0.74	-0.1
2,344,577	+		PFLU_RS10635	0.74	-0.3
2,344,577	+		PFLU_RS10635	0.74	+0.0
2,344,577	+		PFLU_RS10635	0.74	-0.3
2,344,577	+		PFLU_RS10635	0.74	+0.0
2,344,577	+		PFLU_RS10635	0.74	+0.4
2,344,577	+		PFLU_RS10635	0.74	-0.1
2,344,577	+		PFLU_RS10635	0.74	-0.3
2,344,577	+		PFLU_RS10635	0.74	+0.3
2,344,577	+		PFLU_RS10635	0.74	+1.7
2,344,577	+		PFLU_RS10635	0.74	-1.0
2,344,578	-		PFLU_RS10635	0.74	-1.0
2,344,578	-		PFLU_RS10635	0.74	+0.2
2,344,578	-		PFLU_RS10635	0.74	+0.9
2,344,578	-		PFLU_RS10635	0.74	-0.1
2,344,578	-		PFLU_RS10635	0.74	+0.6
2,344,578	-		PFLU_RS10635	0.74	-0.4
2,344,578	-		PFLU_RS10635	0.74	-2.3
2,344,578	-		PFLU_RS10635	0.74	-0.9
2,344,578	-		PFLU_RS10635	0.74	+0.3
2,344,631	+		PFLU_RS10635	0.79	-1.3
2,344,631	+		PFLU_RS10635	0.79	-1.9