Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3873

Experiment: nitrogen source nitrate 5mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrogen source nitrate 5mM
4,502,406	+		Pf6N2E2_3871	0.14	-1.1
4,502,406	+		Pf6N2E2_3871	0.14	+2.0
4,502,406	+		Pf6N2E2_3871	0.14	+0.3
4,502,407	-		Pf6N2E2_3871	0.14	-2.0
4,502,407	-		Pf6N2E2_3871	0.14	-1.2
4,502,457	+		Pf6N2E2_3871	0.21	-0.6
4,502,457	+		Pf6N2E2_3871	0.21	+1.0
4,502,458	-		Pf6N2E2_3871	0.21	-0.0
4,502,494	-		Pf6N2E2_3871	0.26	-0.4
4,502,682	+		Pf6N2E2_3871	0.51	+1.0
4,502,778	+		Pf6N2E2_3871	0.64	-1.0
4,502,778	+		Pf6N2E2_3871	0.64	+0.6
4,502,778	+		Pf6N2E2_3871	0.64	-0.4
4,502,778	+		Pf6N2E2_3871	0.64	-1.0
4,502,778	+		Pf6N2E2_3871	0.64	+0.3
4,502,778	+		Pf6N2E2_3871	0.64	+1.1
4,502,778	+		Pf6N2E2_3871	0.64	+1.0
4,502,778	+		Pf6N2E2_3871	0.64	+0.2
4,502,778	+		Pf6N2E2_3871	0.64	-1.3
4,502,778	+		Pf6N2E2_3871	0.64	-2.1
4,502,778	+		Pf6N2E2_3871	0.64	-0.2
4,502,778	+		Pf6N2E2_3871	0.64	-1.2
4,502,778	+		Pf6N2E2_3871	0.64	-0.8
4,502,779	-		Pf6N2E2_3871	0.64	-0.3
4,502,779	-		Pf6N2E2_3871	0.64	+0.2
4,502,779	-		Pf6N2E2_3871	0.64	+2.0
4,502,779	-		Pf6N2E2_3871	0.64	+1.3
4,502,779	-		Pf6N2E2_3871	0.64	+0.1
4,502,779	-		Pf6N2E2_3871	0.64	+0.3
4,502,779	-		Pf6N2E2_3871	0.64	-1.0
4,502,779	-		Pf6N2E2_3871	0.64	+1.0
4,502,779	-		Pf6N2E2_3871	0.64	+0.8
4,502,779	-		Pf6N2E2_3871	0.64	+1.1
4,502,779	-		Pf6N2E2_3871	0.64	+0.3
4,502,805	+		Pf6N2E2_3871	0.67	-0.1
4,502,805	+		Pf6N2E2_3871	0.67	+0.4
4,502,806	-		Pf6N2E2_3871	0.67	+1.6
4,502,806	-		Pf6N2E2_3871	0.67	+1.7
4,502,806	-		Pf6N2E2_3871	0.67	+2.9
4,502,806	-		Pf6N2E2_3871	0.67	+1.5
4,502,806	-		Pf6N2E2_3871	0.67	+0.9
4,502,806	-		Pf6N2E2_3871	0.67	+1.3
4,502,842	+		Pf6N2E2_3871	0.72	-2.2
4,502,842	+		Pf6N2E2_3871	0.72	+1.0
4,502,843	-				+2.0
4,502,850	+		Pf6N2E2_3871	0.73	+1.6
4,502,851	-		Pf6N2E2_3871	0.73	+0.7
4,502,851	-		Pf6N2E2_3871	0.73	+2.0
4,502,865	+		Pf6N2E2_3871	0.75	-0.4
4,502,901	+		Pf6N2E2_3871	0.80	-1.7
4,502,902	-		Pf6N2E2_3871	0.80	+0.6
4,502,902	-		Pf6N2E2_3871	0.80	-0.6
4,502,904	+		Pf6N2E2_3871	0.80	-2.7
4,502,904	+		Pf6N2E2_3871	0.80	+0.4
4,502,904	+		Pf6N2E2_3871	0.80	+0.9
4,502,904	+		Pf6N2E2_3871	0.80	-1.7
4,502,905	-		Pf6N2E2_3871	0.81	-0.1
4,502,905	-		Pf6N2E2_3871	0.81	-0.4
4,502,905	-		Pf6N2E2_3871	0.81	-1.0
4,502,905	-		Pf6N2E2_3871	0.81	-1.6
4,502,905	-		Pf6N2E2_3871	0.81	+2.0
4,502,905	-		Pf6N2E2_3871	0.81	+0.0
4,502,967	+		Pf6N2E2_3871	0.89	+0.0
4,502,968	-		Pf6N2E2_3871	0.89	+1.0
4,503,000	+				+1.0
4,503,000	+				+0.0
4,503,000	+				-2.0
4,503,000	+				-1.7
4,503,001	-				+0.6
4,503,001	-				-0.1
4,503,001	-				-0.1
4,503,056	+				+2.0
4,503,056	+				-1.1
4,503,057	-				+0.0
4,503,057	-				+1.1
4,503,081	+				+0.3
4,503,082	-				+0.6
4,503,086	+				-0.8
4,503,086	+				+0.5
4,503,086	+				+0.5
4,503,086	+				-0.6
4,503,086	+				-0.4
4,503,086	+				-2.7
4,503,087	-				+1.0
4,503,087	-				+0.0
4,503,089	+				+0.0
4,503,089	+				-0.4
4,503,102	+				-2.7
4,503,102	+				+2.0
4,503,118	+				+0.4
4,503,118	+				+1.7
4,503,119	-				-0.2
4,503,169	+		Pf6N2E2_3872	0.44	+2.3
4,503,169	+		Pf6N2E2_3872	0.44	-0.6
4,503,170	-		Pf6N2E2_3872	0.45	-2.2
4,503,170	-		Pf6N2E2_3872	0.45	-0.8
4,503,255	+				+2.0
4,503,256	-				+1.0
4,503,256	-				+0.0
4,503,259	+				+2.0
4,503,259	+				-0.7
4,503,260	-				+0.1
4,503,260	-				-0.3
4,503,378	+				+2.0
4,503,380	+				+1.0
4,503,380	+				+1.0
4,503,386	+				+0.4
4,503,386	+				-1.4
4,503,386	+				-1.3
4,503,386	+				-1.1
4,503,386	+				+0.0
4,503,386	+				-0.8
4,503,386	+				+0.4
4,503,386	+				+0.0
4,503,386	+				+2.0
4,503,386	+				+0.0
4,503,386	+				+2.0
4,503,386	+				+0.0
4,503,387	-				+0.1
4,503,387	-				+0.0
4,503,387	-				-0.8
4,503,387	-				+2.0
4,503,387	-				+1.0
4,503,387	-				+2.0
4,503,387	-				-0.1
4,503,387	-				+1.0
4,503,387	-				+1.0
4,503,387	-				-0.6
4,503,387	-				-1.2
4,503,387	-				+1.2
4,503,387	-				-1.2
4,503,422	+				-1.2
4,503,422	+				-0.8
4,503,461	+				-1.1
4,503,462	-				+1.5
4,503,545	+		Pf6N2E2_3873	0.11	-2.3
4,503,545	+		Pf6N2E2_3873	0.11	-1.3
4,503,545	+		Pf6N2E2_3873	0.11	-3.2
4,503,545	+		Pf6N2E2_3873	0.11	+1.0
4,503,546	-		Pf6N2E2_3873	0.11	-0.3
4,503,546	-		Pf6N2E2_3873	0.11	+1.0
4,503,546	-		Pf6N2E2_3873	0.11	-2.6
4,503,607	-		Pf6N2E2_3873	0.16	-1.2
4,503,620	+		Pf6N2E2_3873	0.17	-0.6
4,503,620	+		Pf6N2E2_3873	0.17	+3.0
4,503,620	+		Pf6N2E2_3873	0.17	+0.4
4,503,620	+		Pf6N2E2_3873	0.17	-2.6
4,503,620	+		Pf6N2E2_3873	0.17	-0.7
4,503,620	+		Pf6N2E2_3873	0.17	+0.4
4,503,620	+		Pf6N2E2_3873	0.17	+1.0
4,503,620	+		Pf6N2E2_3873	0.17	+2.0
4,503,620	+		Pf6N2E2_3873	0.17	-0.3
4,503,620	+		Pf6N2E2_3873	0.17	+0.4
4,503,621	-		Pf6N2E2_3873	0.17	-1.6
4,503,621	-		Pf6N2E2_3873	0.17	+0.4
4,503,621	-		Pf6N2E2_3873	0.17	-1.2
4,503,621	-		Pf6N2E2_3873	0.17	-2.3
4,503,621	-		Pf6N2E2_3873	0.17	+1.1
4,503,630	+		Pf6N2E2_3873	0.18	+1.0
4,503,630	+		Pf6N2E2_3873	0.18	+0.4
4,503,630	+		Pf6N2E2_3873	0.18	+0.0
4,503,630	+		Pf6N2E2_3873	0.18	+0.0
4,503,630	+		Pf6N2E2_3873	0.18	+1.0
4,503,631	-		Pf6N2E2_3873	0.18	+1.0
4,503,631	-		Pf6N2E2_3873	0.18	+0.4
4,503,631	-		Pf6N2E2_3873	0.18	-0.4
4,503,631	-		Pf6N2E2_3873	0.18	+2.0
4,503,631	-		Pf6N2E2_3873	0.18	+0.8
4,503,631	-		Pf6N2E2_3873	0.18	-0.4
4,503,631	-		Pf6N2E2_3873	0.18	-1.5
4,503,631	-		Pf6N2E2_3873	0.18	+2.0
4,503,632	+		Pf6N2E2_3873	0.18	-0.8
4,503,632	+		Pf6N2E2_3873	0.18	+1.0
4,503,632	+		Pf6N2E2_3873	0.18	-0.3
4,503,632	+		Pf6N2E2_3873	0.18	-0.8
4,503,632	+		Pf6N2E2_3873	0.18	-1.2
4,503,632	+		Pf6N2E2_3873	0.18	+3.2
4,503,633	-		Pf6N2E2_3873	0.18	-2.7
4,503,633	-		Pf6N2E2_3873	0.18	-1.3
4,503,633	-		Pf6N2E2_3873	0.18	+0.4
4,503,633	-		Pf6N2E2_3873	0.18	-1.3
4,503,633	-		Pf6N2E2_3873	0.18	-2.5
4,503,633	-		Pf6N2E2_3873	0.18	-0.4
4,503,633	-		Pf6N2E2_3873	0.18	-0.6
4,503,722	+		Pf6N2E2_3873	0.25	+2.0
4,503,737	+		Pf6N2E2_3873	0.26	-1.6
4,503,737	+		Pf6N2E2_3873	0.26	+1.0
4,503,737	+		Pf6N2E2_3873	0.26	-0.3
4,503,744	+		Pf6N2E2_3873	0.26	+0.0
4,503,744	+		Pf6N2E2_3873	0.26	+0.4
4,503,745	-		Pf6N2E2_3873	0.27	-1.8
4,503,797	+		Pf6N2E2_3873	0.31	-1.5
4,503,923	+		Pf6N2E2_3873	0.40	+1.0
4,503,923	+		Pf6N2E2_3873	0.40	-2.9
4,503,923	+		Pf6N2E2_3873	0.40	-2.2
4,503,923	+		Pf6N2E2_3873	0.40	+0.5
4,503,923	+		Pf6N2E2_3873	0.40	-1.9
4,503,923	+		Pf6N2E2_3873	0.40	+1.0
4,503,923	+		Pf6N2E2_3873	0.40	-0.6
4,503,924	-		Pf6N2E2_3873	0.40	-1.6
4,503,924	-		Pf6N2E2_3873	0.40	-0.6
4,503,924	-		Pf6N2E2_3873	0.40	-1.6
4,503,924	-		Pf6N2E2_3873	0.40	-0.2
4,503,924	-		Pf6N2E2_3873	0.40	+0.0
4,503,924	-		Pf6N2E2_3873	0.40	-1.8
4,503,924	-		Pf6N2E2_3873	0.40	+1.0
4,503,924	-		Pf6N2E2_3873	0.40	-0.6
4,503,924	-		Pf6N2E2_3873	0.40	-0.3
4,503,924	-		Pf6N2E2_3873	0.40	+2.0
4,503,998	+		Pf6N2E2_3873	0.46	+1.0
4,503,998	+		Pf6N2E2_3873	0.46	-2.7
4,503,998	+		Pf6N2E2_3873	0.46	+0.0
4,503,998	+		Pf6N2E2_3873	0.46	-0.6
4,503,998	+		Pf6N2E2_3873	0.46	-1.4
4,503,999	-		Pf6N2E2_3873	0.46	+0.0
4,503,999	-		Pf6N2E2_3873	0.46	+1.9
4,503,999	-		Pf6N2E2_3873	0.46	+0.1
4,503,999	-		Pf6N2E2_3873	0.46	+0.0
4,503,999	-		Pf6N2E2_3873	0.46	+0.4
4,503,999	-		Pf6N2E2_3873	0.46	-0.8
4,503,999	-		Pf6N2E2_3873	0.46	+2.0
4,503,999	-		Pf6N2E2_3873	0.46	-0.4
4,503,999	-		Pf6N2E2_3873	0.46	-1.6
4,503,999	-		Pf6N2E2_3873	0.46	-0.3
4,503,999	-		Pf6N2E2_3873	0.46	-0.3
4,504,013	+		Pf6N2E2_3873	0.47	-0.8
4,504,013	+		Pf6N2E2_3873	0.47	+0.0
4,504,013	+		Pf6N2E2_3873	0.47	+1.5
4,504,013	+		Pf6N2E2_3873	0.47	+2.0
4,504,013	+		Pf6N2E2_3873	0.47	+2.0
4,504,014	-		Pf6N2E2_3873	0.47	+1.0
4,504,014	-		Pf6N2E2_3873	0.47	+2.0
4,504,014	-		Pf6N2E2_3873	0.47	-1.0
4,504,014	-		Pf6N2E2_3873	0.47	+2.0
4,504,028	-		Pf6N2E2_3873	0.49	-1.1
4,504,028	-		Pf6N2E2_3873	0.49	-0.0
4,504,028	-		Pf6N2E2_3873	0.49	-1.8
4,504,028	-		Pf6N2E2_3873	0.49	-1.4
4,504,028	-		Pf6N2E2_3873	0.49	+2.3
4,504,049	+		Pf6N2E2_3873	0.50	-0.3
4,504,082	+		Pf6N2E2_3873	0.53	+1.3
4,504,083	-		Pf6N2E2_3873	0.53	-0.8
4,504,083	-		Pf6N2E2_3873	0.53	+0.4
4,504,083	-		Pf6N2E2_3873	0.53	+0.4
4,504,220	+		Pf6N2E2_3873	0.63	+1.2
4,504,220	+		Pf6N2E2_3873	0.63	-3.2
4,504,221	-		Pf6N2E2_3873	0.64	+2.0
4,504,221	-		Pf6N2E2_3873	0.64	-1.2
4,504,221	-		Pf6N2E2_3873	0.64	-1.0
4,504,221	-		Pf6N2E2_3873	0.64	+1.3
4,504,250	+		Pf6N2E2_3873	0.66	+0.3
4,504,250	+		Pf6N2E2_3873	0.66	+0.0
4,504,251	-		Pf6N2E2_3873	0.66	+0.0
4,504,251	-		Pf6N2E2_3873	0.66	+0.0
4,504,251	-		Pf6N2E2_3873	0.66	+1.0
4,504,433	+		Pf6N2E2_3873	0.80	-2.8
4,504,494	+		Pf6N2E2_3873	0.85	-0.1
4,504,495	-		Pf6N2E2_3873	0.85	-0.8
4,504,495	-		Pf6N2E2_3873	0.85	+0.7
4,504,495	-		Pf6N2E2_3873	0.85	-1.3
4,504,498	+		Pf6N2E2_3873	0.85	+2.0
4,504,498	+		Pf6N2E2_3873	0.85	-1.0
4,504,498	+		Pf6N2E2_3873	0.85	-0.4
4,504,498	+		Pf6N2E2_3873	0.85	+1.0
4,504,498	+		Pf6N2E2_3873	0.85	+0.3
4,504,498	+		Pf6N2E2_3873	0.85	+1.0
4,504,498	+		Pf6N2E2_3873	0.85	+1.0
4,504,498	+		Pf6N2E2_3873	0.85	-1.8
4,504,499	-		Pf6N2E2_3873	0.85	+0.3
4,504,499	-		Pf6N2E2_3873	0.85	+0.4
4,504,499	-		Pf6N2E2_3873	0.85	-0.3
4,504,499	-		Pf6N2E2_3873	0.85	-0.1
4,504,499	-		Pf6N2E2_3873	0.85	-3.2
4,504,499	-		Pf6N2E2_3873	0.85	-1.1
4,504,499	-		Pf6N2E2_3873	0.85	-0.8
4,504,499	-		Pf6N2E2_3873	0.85	+2.0
4,504,499	-		Pf6N2E2_3873	0.85	-3.0
4,504,499	-		Pf6N2E2_3873	0.85	-0.3
4,504,557	+		Pf6N2E2_3873	0.90	+0.5
4,504,557	+		Pf6N2E2_3873	0.90	+0.4
4,504,557	+		Pf6N2E2_3873	0.90	+0.4
4,504,557	+		Pf6N2E2_3873	0.90	+0.2
4,504,557	+		Pf6N2E2_3873	0.90	+0.4
4,504,557	+		Pf6N2E2_3873	0.90	-1.3
4,504,557	+		Pf6N2E2_3873	0.90	-0.8
4,504,557	+		Pf6N2E2_3873	0.90	-2.6
4,504,558	-		Pf6N2E2_3873	0.90	-0.2
4,504,558	-		Pf6N2E2_3873	0.90	+2.0
4,504,558	-		Pf6N2E2_3873	0.90	+0.4
4,504,558	-		Pf6N2E2_3873	0.90	+0.1
4,504,558	-		Pf6N2E2_3873	0.90	+0.3
4,504,558	-		Pf6N2E2_3873	0.90	-0.5
4,504,559	+		Pf6N2E2_3873	0.90	+2.0
4,504,559	+		Pf6N2E2_3873	0.90	-0.6
4,504,559	+		Pf6N2E2_3873	0.90	+1.0
4,504,559	+		Pf6N2E2_3873	0.90	-2.0
4,504,559	+		Pf6N2E2_3873	0.90	-1.7
4,504,559	+		Pf6N2E2_3873	0.90	-0.1
4,504,560	-		Pf6N2E2_3873	0.90	-1.8
4,504,560	-		Pf6N2E2_3873	0.90	-0.3
4,504,560	-		Pf6N2E2_3873	0.90	+0.4
4,504,560	-		Pf6N2E2_3873	0.90	-0.3
4,504,560	-		Pf6N2E2_3873	0.90	-1.2
4,504,560	-		Pf6N2E2_3873	0.90	+0.4
4,504,560	-		Pf6N2E2_3873	0.90	+2.0
4,504,560	-		Pf6N2E2_3873	0.90	-1.9
4,504,560	-		Pf6N2E2_3873	0.90	+0.2
4,504,560	-		Pf6N2E2_3873	0.90	+0.4
4,504,560	-		Pf6N2E2_3873	0.90	+1.0
4,504,560	-		Pf6N2E2_3873	0.90	-0.3
4,504,560	-		Pf6N2E2_3873	0.90	+2.0
4,504,560	-		Pf6N2E2_3873	0.90	-1.8
4,504,668	+				+2.0
4,504,668	+				+0.4
4,504,669	-				-0.3
4,504,669	-				+2.0
4,504,669	-				-0.3
4,504,669	-				+2.0
4,504,669	-				+2.0
4,504,669	-				-0.3
4,504,671	+				-0.4
4,504,671	+				-0.9
4,504,671	+				-1.0
4,504,671	+				+2.0
4,504,671	+				+0.7
4,504,671	+				-1.6
4,504,671	+				+0.9
4,504,672	-				+1.3
4,504,672	-				+3.0
4,504,672	-				+2.0
4,504,672	-				+0.4
4,504,672	-				-0.4
4,504,672	-				+0.0
4,504,672	-				-0.8
4,504,672	-				+2.0
4,504,672	-				-0.0
4,504,704	+				+2.0
4,504,704	+				-0.3
4,504,705	-				-0.1
4,504,714	+				+0.0
4,504,714	+				+0.1
4,504,715	-				+1.4
4,504,781	+				-1.6
4,504,781	+				-1.2
4,504,781	+				+0.0
4,504,824	-				+0.1
4,504,826	+				-0.1
4,504,826	+				+1.0
4,504,827	-				-1.9
4,504,827	-				-0.8
4,504,827	-				-0.6
4,504,830	+				-1.0
4,504,830	+				-1.4
4,504,831	-				-1.3
4,504,831	-				+0.7
4,504,846	+				+0.0
4,504,858	+				+0.4
4,504,858	+				+0.4
4,504,859	-				+0.0
4,504,870	+				+0.0
4,504,870	+				+0.9
4,504,932	-				+0.3
4,504,932	-				+1.0
4,505,132	+		Pf6N2E2_3874	0.28	-1.4
4,505,132	+		Pf6N2E2_3874	0.28	-0.6
4,505,132	+		Pf6N2E2_3874	0.28	-0.5
4,505,132	+		Pf6N2E2_3874	0.28	-0.7
4,505,133	-		Pf6N2E2_3874	0.29	-0.2
4,505,133	-		Pf6N2E2_3874	0.29	-0.5
4,505,147	+		Pf6N2E2_3874	0.31	-1.3
4,505,147	+		Pf6N2E2_3874	0.31	+0.3
4,505,148	-		Pf6N2E2_3874	0.31	-0.2
4,505,264	-		Pf6N2E2_3874	0.48	-1.1
4,505,264	-		Pf6N2E2_3874	0.48	-0.8
4,505,264	-		Pf6N2E2_3874	0.48	+0.6
4,505,392	+		Pf6N2E2_3874	0.67	+0.4
4,505,392	+		Pf6N2E2_3874	0.67	-1.4
4,505,392	+		Pf6N2E2_3874	0.67	+0.1
4,505,393	-		Pf6N2E2_3874	0.67	+0.4
4,505,452	+		Pf6N2E2_3874	0.76	+2.0
4,505,453	-		Pf6N2E2_3874	0.76	-2.2
4,505,529	+		Pf6N2E2_3874	0.88	-0.0
4,505,529	+		Pf6N2E2_3874	0.88	+0.0
4,505,529	+		Pf6N2E2_3874	0.88	+0.9
4,505,529	+		Pf6N2E2_3874	0.88	-1.7
4,505,529	+		Pf6N2E2_3874	0.88	-1.4
4,505,530	-		Pf6N2E2_3874	0.88	+0.8
4,505,530	-		Pf6N2E2_3874	0.88	-0.3
4,505,530	-		Pf6N2E2_3874	0.88	-1.0
4,505,530	-		Pf6N2E2_3874	0.88	+1.0
4,505,590	+				+0.4
4,505,590	+				+0.2
4,505,590	+				-0.6
4,505,591	-				+1.2
4,505,591	-				+0.6
4,505,591	-				+0.2
4,505,591	-				-0.1
4,505,591	-				-0.3
4,505,591	-				+2.0
4,505,594	+				-0.8
4,505,594	+				-0.9
4,505,594	+				+0.5
4,505,594	+				-1.7
4,505,594	+				-2.2
4,505,594	+				-2.8
4,505,594	+				-0.2
4,505,594	+				-0.7
4,505,595	-				-0.2
4,505,595	-				-0.6
4,505,595	-				-3.5
4,505,595	-				-0.7
4,505,595	-				+5.8
4,505,595	-				-0.7
4,505,595	-				-0.8
4,505,595	-				+1.0
4,505,596	+				+0.0
4,505,596	+				-0.4
4,505,596	+				+0.6
4,505,596	+				-0.0
4,505,596	+				-1.6
4,505,596	+				-0.4
4,505,597	-				-2.2
4,505,597	-				+2.0
4,505,597	-				+0.0
4,505,597	-				+2.3
4,505,597	-				+0.6
4,505,597	-				+0.2
4,505,597	-				+0.0
4,505,597	-				-0.9
4,505,597	-				+1.0
4,505,652	+				-0.8
4,505,653	-				-0.3