Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08525

Experiment: 4-Acetoxy-3-methoxycinnamic 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Acetoxy-3-methoxycinnamic 2 mM (C)
1,900,597	+				-0.5
1,900,597	+				+0.3
1,900,597	+				+1.3
1,900,621	+				+1.8
1,900,645	+				+1.3
1,900,645	+				-1.3
1,900,645	+				+0.5
1,900,646	-				-1.8
1,900,646	-				-0.8
1,900,646	-				-1.1
1,900,646	-				+1.7
1,900,646	-				+2.0
1,900,648	+				+0.5
1,900,648	+				+0.9
1,900,648	+				+0.5
1,900,648	+				-0.4
1,900,648	+				-0.7
1,900,648	+				+0.0
1,900,648	+				-1.8
1,900,649	-				-2.4
1,900,649	-				+0.0
1,900,649	-				-0.4
1,900,649	-				+0.9
1,900,649	-				+0.5
1,900,649	-				-0.2
1,900,654	+				-2.3
1,900,655	-				+0.8
1,900,655	-				-0.7
1,900,812	+		PFLU_RS08525	0.26	-0.1
1,900,812	+		PFLU_RS08525	0.26	-0.2
1,900,812	+		PFLU_RS08525	0.26	-1.9
1,900,813	-		PFLU_RS08525	0.26	-1.1
1,900,813	-		PFLU_RS08525	0.26	+1.9
1,900,813	-		PFLU_RS08525	0.26	+0.8
1,900,842	+		PFLU_RS08525	0.32	+0.2
1,900,842	+		PFLU_RS08525	0.32	-1.7
1,900,842	+		PFLU_RS08525	0.32	+1.1
1,900,842	+		PFLU_RS08525	0.32	-1.5
1,900,842	+		PFLU_RS08525	0.32	+0.8
1,900,842	+		PFLU_RS08525	0.32	+1.4
1,900,842	+		PFLU_RS08525	0.32	+0.4
1,900,842	+		PFLU_RS08525	0.32	+0.9
1,900,843	-		PFLU_RS08525	0.32	-0.4
1,900,843	-		PFLU_RS08525	0.32	+0.5
1,900,843	-		PFLU_RS08525	0.32	+0.5
1,900,843	-		PFLU_RS08525	0.32	+0.5
1,900,843	-		PFLU_RS08525	0.32	+0.9
1,901,213	+				-0.5
1,901,214	-				+0.5
1,901,243	+		PFLU_RS08530	0.16	+1.2
1,901,243	+		PFLU_RS08530	0.16	-1.3
1,901,243	+		PFLU_RS08530	0.16	+0.4
1,901,243	+		PFLU_RS08530	0.16	-1.9
1,901,243	+		PFLU_RS08530	0.16	+0.1
1,901,243	+		PFLU_RS08530	0.16	+2.5
1,901,244	-		PFLU_RS08530	0.16	+1.9
1,901,244	-		PFLU_RS08530	0.16	-0.5
1,901,244	-		PFLU_RS08530	0.16	+0.2
1,901,244	-		PFLU_RS08530	0.16	+0.5
1,901,245	+		PFLU_RS08530	0.16	+1.2
1,901,245	+		PFLU_RS08530	0.16	+0.9
1,901,245	+		PFLU_RS08530	0.16	+1.5
1,901,246	-		PFLU_RS08530	0.16	+0.7
1,901,246	-		PFLU_RS08530	0.16	-1.5
1,901,246	-		PFLU_RS08530	0.16	+0.7
1,901,246	-		PFLU_RS08530	0.16	-0.3
1,901,246	-		PFLU_RS08530	0.16	+2.3
1,901,276	+		PFLU_RS08530	0.23	-0.4
1,901,277	-		PFLU_RS08530	0.23	+0.3
1,901,277	-		PFLU_RS08530	0.23	+0.5
1,901,277	-		PFLU_RS08530	0.23	+1.3
1,901,285	+		PFLU_RS08530	0.24	-0.5
1,901,285	+		PFLU_RS08530	0.24	-1.4
1,901,285	+		PFLU_RS08530	0.24	-1.3
1,901,285	+		PFLU_RS08530	0.24	-1.9
1,901,286	-		PFLU_RS08530	0.25	-0.5
1,901,677	+				-0.8
1,901,677	+				+0.7
1,901,677	+				+0.1
1,901,678	-				-0.8
1,901,678	-				-0.8
1,901,678	-				-0.3
1,901,816	+				+1.3
1,901,816	+				-0.1
1,901,816	+				-1.6
1,901,816	+				-0.3
1,901,816	+				-0.1
1,901,817	-				+0.5
1,901,817	-				-1.8
1,901,817	-				-0.6
1,901,817	-				-1.8
1,901,817	-				+0.1
1,901,817	-				+0.7
1,901,817	-				+1.5
1,901,817	-				-1.3
1,901,817	-				+0.9
1,901,817	-				-2.5
1,901,817	-				-2.8
1,902,044	+		PFLU_RS08535	0.19	-2.9
1,902,044	+		PFLU_RS08535	0.19	+1.5
1,902,044	+		PFLU_RS08535	0.19	-0.5
1,902,044	+		PFLU_RS08535	0.19	-1.5
1,902,044	+		PFLU_RS08535	0.19	-1.0
1,902,044	+		PFLU_RS08535	0.19	-1.3
1,902,045	-		PFLU_RS08535	0.19	+0.5
1,902,061	+		PFLU_RS08535	0.20	+2.2
1,902,062	-		PFLU_RS08535	0.20	-1.1
1,902,145	+		PFLU_RS08535	0.24	-1.3