Experiment: nitrogen source nitrate 20mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_715 and Pf6N2E2_716 are separated by 73 nucleotides Pf6N2E2_716 and Pf6N2E2_717 are separated by 160 nucleotides Pf6N2E2_717 and Pf6N2E2_718 are separated by 155 nucleotides Pf6N2E2_718 and Pf6N2E2_719 are separated by 88 nucleotides
Pf6N2E2_715 - putative membrane protein, at 819,372 to 819,809
_715
Pf6N2E2_716 - Nitric oxide-dependent regulator DnrN or NorA, at 819,883 to 820,557
_716
Pf6N2E2_717 - Functional role page for Anaerobic nitric oxide reductase transcription regulator NorR, at 820,718 to 822,250
_717
Pf6N2E2_718 - Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5), at 822,406 to 823,053
_718
Pf6N2E2_719 - Molybdenum cofactor biosynthesis protein MoaB, at 823,142 to 823,696
_719
Position (kb) 820
821
822
823 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 819.795 kb on + strand at 819.795 kb on + strand at 819.795 kb on + strand at 819.796 kb on - strand at 819.864 kb on - strand at 819.978 kb on - strand, within Pf6N2E2_716 at 820.181 kb on + strand, within Pf6N2E2_716 at 820.181 kb on + strand, within Pf6N2E2_716 at 820.181 kb on + strand, within Pf6N2E2_716 at 820.181 kb on + strand, within Pf6N2E2_716 at 820.182 kb on - strand, within Pf6N2E2_716 at 820.182 kb on - strand, within Pf6N2E2_716 at 820.182 kb on - strand, within Pf6N2E2_716 at 820.182 kb on - strand, within Pf6N2E2_716 at 820.478 kb on + strand, within Pf6N2E2_716 at 820.478 kb on + strand, within Pf6N2E2_716 at 820.478 kb on + strand, within Pf6N2E2_716 at 820.478 kb on + strand, within Pf6N2E2_716 at 820.478 kb on + strand, within Pf6N2E2_716 at 820.479 kb on - strand, within Pf6N2E2_716 at 820.479 kb on - strand, within Pf6N2E2_716 at 820.479 kb on - strand, within Pf6N2E2_716 at 820.491 kb on + strand at 820.491 kb on + strand at 820.714 kb on + strand at 820.714 kb on + strand at 820.805 kb on + strand at 820.806 kb on - strand at 820.994 kb on + strand, within Pf6N2E2_717 at 821.063 kb on + strand, within Pf6N2E2_717 at 821.064 kb on - strand, within Pf6N2E2_717 at 821.064 kb on - strand, within Pf6N2E2_717 at 821.064 kb on - strand, within Pf6N2E2_717 at 821.064 kb on - strand, within Pf6N2E2_717 at 821.064 kb on - strand, within Pf6N2E2_717 at 821.319 kb on + strand, within Pf6N2E2_717 at 821.319 kb on + strand, within Pf6N2E2_717 at 821.319 kb on + strand, within Pf6N2E2_717 at 821.319 kb on + strand, within Pf6N2E2_717 at 821.320 kb on - strand, within Pf6N2E2_717 at 821.554 kb on + strand, within Pf6N2E2_717 at 821.744 kb on + strand, within Pf6N2E2_717 at 821.745 kb on - strand, within Pf6N2E2_717 at 821.745 kb on - strand, within Pf6N2E2_717 at 821.745 kb on - strand, within Pf6N2E2_717 at 822.220 kb on + strand at 822.220 kb on + strand at 822.220 kb on + strand at 822.221 kb on - strand at 822.650 kb on - strand, within Pf6N2E2_718 at 822.732 kb on - strand, within Pf6N2E2_718 at 822.732 kb on - strand, within Pf6N2E2_718 at 822.732 kb on - strand, within Pf6N2E2_718 at 822.782 kb on - strand, within Pf6N2E2_718 at 823.067 kb on + strand at 823.067 kb on + strand at 823.067 kb on + strand at 823.068 kb on - strand at 823.068 kb on - strand at 823.084 kb on - strand at 823.193 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction nitrogen source nitrate 20mM remove 819,795 + -0.5 819,795 + -2.0 819,795 + -1.1 819,796 - +1.9 819,864 - -0.2 819,978 - Pf6N2E2_716 0.14 +0.4 820,181 + Pf6N2E2_716 0.44 +0.3 820,181 + Pf6N2E2_716 0.44 +0.9 820,181 + Pf6N2E2_716 0.44 -0.8 820,181 + Pf6N2E2_716 0.44 +0.6 820,182 - Pf6N2E2_716 0.44 +0.9 820,182 - Pf6N2E2_716 0.44 +0.1 820,182 - Pf6N2E2_716 0.44 -1.5 820,182 - Pf6N2E2_716 0.44 -2.4 820,478 + Pf6N2E2_716 0.88 +1.9 820,478 + Pf6N2E2_716 0.88 +0.9 820,478 + Pf6N2E2_716 0.88 -1.6 820,478 + Pf6N2E2_716 0.88 -2.8 820,478 + Pf6N2E2_716 0.88 -1.8 820,479 - Pf6N2E2_716 0.88 +1.1 820,479 - Pf6N2E2_716 0.88 -0.3 820,479 - Pf6N2E2_716 0.88 +0.1 820,491 + -0.2 820,491 + -0.4 820,714 + -1.1 820,714 + +0.9 820,805 + -0.1 820,806 - +1.9 820,994 + Pf6N2E2_717 0.18 +0.3 821,063 + Pf6N2E2_717 0.23 +2.6 821,064 - Pf6N2E2_717 0.23 +1.7 821,064 - Pf6N2E2_717 0.23 -0.5 821,064 - Pf6N2E2_717 0.23 -1.1 821,064 - Pf6N2E2_717 0.23 -0.6 821,064 - Pf6N2E2_717 0.23 +0.1 821,319 + Pf6N2E2_717 0.39 +0.7 821,319 + Pf6N2E2_717 0.39 +0.8 821,319 + Pf6N2E2_717 0.39 +0.9 821,319 + Pf6N2E2_717 0.39 -0.3 821,320 - Pf6N2E2_717 0.39 +0.0 821,554 + Pf6N2E2_717 0.55 +0.9 821,744 + Pf6N2E2_717 0.67 -1.8 821,745 - Pf6N2E2_717 0.67 +0.0 821,745 - Pf6N2E2_717 0.67 +0.5 821,745 - Pf6N2E2_717 0.67 -0.7 822,220 + -0.9 822,220 + -2.2 822,220 + +0.3 822,221 - -0.5 822,650 - Pf6N2E2_718 0.38 +0.0 822,732 - Pf6N2E2_718 0.50 -3.7 822,732 - Pf6N2E2_718 0.50 -0.5 822,732 - Pf6N2E2_718 0.50 +0.3 822,782 - Pf6N2E2_718 0.58 +0.5 823,067 + -2.7 823,067 + -1.1 823,067 + -0.6 823,068 - +3.9 823,068 - +1.9 823,084 - -0.7 823,193 - +1.9
Or see this region's nucleotide sequence