Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS17515

Experiment: 4-Acetoxy-3-methoxycinnamic 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Acetoxy-3-methoxycinnamic 2 mM (C)
3,977,455	-				+0.1
3,977,475	+				-1.8
3,977,475	+				+1.5
3,977,476	-				+1.6
3,977,476	-				+2.2
3,977,476	-				+1.4
3,977,476	-				+0.4
3,977,698	+		PFLU_RS17510	0.17	-1.4
3,977,698	+		PFLU_RS17510	0.17	-1.8
3,977,698	+		PFLU_RS17510	0.17	+0.4
3,977,698	+		PFLU_RS17510	0.17	+0.4
3,977,698	+		PFLU_RS17510	0.17	+0.5
3,977,698	+		PFLU_RS17510	0.17	+1.3
3,977,699	-		PFLU_RS17510	0.17	-0.4
3,977,699	-		PFLU_RS17510	0.17	-2.3
3,977,699	-		PFLU_RS17510	0.17	-1.2
3,977,699	-		PFLU_RS17510	0.17	+3.7
3,977,699	-		PFLU_RS17510	0.17	-0.6
3,977,824	+		PFLU_RS17510	0.31	-0.2
3,977,824	+		PFLU_RS17510	0.31	-2.3
3,977,824	+		PFLU_RS17510	0.31	+0.1
3,977,913	+		PFLU_RS17510	0.42	-2.1
3,977,914	-		PFLU_RS17510	0.42	+0.7
3,977,914	-		PFLU_RS17510	0.42	+1.5
3,977,914	-		PFLU_RS17510	0.42	-2.5
3,977,914	-		PFLU_RS17510	0.42	-0.9
3,977,916	+		PFLU_RS17510	0.42	-0.2
3,978,268	+		PFLU_RS17510	0.83	+2.1
3,978,269	-		PFLU_RS17510	0.83	-0.3
3,978,501	+		PFLU_RS17515	0.15	-1.9
3,978,507	+		PFLU_RS17515	0.16	-0.4
3,978,507	+		PFLU_RS17515	0.16	-2.5
3,978,507	+		PFLU_RS17515	0.16	+2.7
3,978,507	+		PFLU_RS17515	0.16	-1.4
3,978,507	+		PFLU_RS17515	0.16	-1.3
3,978,507	+		PFLU_RS17515	0.16	-0.6
3,978,507	+		PFLU_RS17515	0.16	-0.9
3,978,507	+		PFLU_RS17515	0.16	-0.6
3,978,610	+		PFLU_RS17515	0.32	-2.6
3,978,611	-		PFLU_RS17515	0.32	-0.2
3,978,838	+		PFLU_RS17515	0.68	+0.4
3,978,946	+		PFLU_RS17515	0.85	-0.6
3,978,947	-		PFLU_RS17515	0.86	-2.2
3,978,947	-		PFLU_RS17515	0.86	-0.2
3,979,030	+				+0.1
3,979,031	-				+2.2
3,979,031	-				+0.3
3,979,067	+				+1.7
3,979,068	-				-2.5
3,979,072	+				+1.1
3,979,081	+				-1.2
3,979,082	-				-0.0
3,979,082	-				-1.6
3,979,100	+				+1.5
3,979,101	-				+1.8
3,979,101	-				+2.4
3,979,107	+				-1.8
3,979,107	+				-1.6
3,979,107	+				-1.4
3,979,107	+				-1.6
3,979,107	+				-0.4
3,979,108	-				+1.9
3,979,108	-				+0.8
3,979,108	-				-0.3
3,979,108	-				-1.4
3,979,108	-				+1.2
3,979,108	-				+0.6
3,979,108	-				+0.5
3,979,299	-		PFLU_RS17520	0.22	-0.2
3,979,470	-		PFLU_RS17520	0.40	-0.6
3,979,483	+		PFLU_RS17520	0.41	-1.9
3,979,483	+		PFLU_RS17520	0.41	-1.4
3,979,687	+		PFLU_RS17520	0.62	+1.2
3,979,690	+		PFLU_RS17520	0.62	-1.4
3,979,817	-		PFLU_RS17520	0.75	+2.9
3,979,849	+		PFLU_RS17520	0.78	-1.8
3,979,849	+		PFLU_RS17520	0.78	-1.6
3,979,849	+		PFLU_RS17520	0.78	+2.1
3,979,850	-		PFLU_RS17520	0.78	-0.9
3,979,850	-		PFLU_RS17520	0.78	-2.9
3,979,850	-		PFLU_RS17520	0.78	-0.2
3,979,850	-		PFLU_RS17520	0.78	-1.8
3,979,897	+		PFLU_RS17520	0.83	+1.6
3,979,897	+		PFLU_RS17520	0.83	+0.3
3,979,897	+		PFLU_RS17520	0.83	-1.9
3,979,898	-		PFLU_RS17520	0.83	+1.6
3,979,898	-		PFLU_RS17520	0.83	-0.2
3,979,928	-		PFLU_RS17520	0.86	+1.1
3,979,990	+				+0.0
3,979,990	+				-1.8
3,979,990	+				+0.7
3,979,990	+				+2.1
3,979,991	-				-3.7
3,979,991	-				-0.4
3,979,991	-				+1.2
3,980,009	+				-1.6
3,980,009	+				-0.9
3,980,010	-				-0.9