Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS17135

Experiment: 4-Acetoxy-3-methoxycinnamic 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Acetoxy-3-methoxycinnamic 2 mM (C)
3,887,898	-				+0.2
3,887,919	+				+2.1
3,887,920	-				-1.9
3,887,928	+				-2.5
3,887,928	+				+1.0
3,887,928	+				+1.2
3,887,928	+				-2.1
3,887,928	+				+2.0
3,887,929	-				+0.5
3,887,929	-				-0.2
3,887,929	-				+2.1
3,888,002	-				+1.3
3,888,002	-				+0.1
3,888,002	-				+0.7
3,888,139	+				-1.2
3,888,139	+				-2.7
3,888,139	+				-0.4
3,888,175	+				-0.6
3,888,175	+				+0.6
3,888,176	-				+0.2
3,888,214	+				-1.6
3,888,214	+				-0.9
3,888,215	-				-0.1
3,888,215	-				-1.6
3,888,215	-				-1.4
3,888,234	+				-0.2
3,888,234	+				-1.6
3,888,234	+				-2.2
3,888,234	+				-0.9
3,888,235	-				+1.7
3,888,235	-				-1.4
3,888,235	-				+0.9
3,888,290	-				-3.1
3,888,290	-				+0.3
3,888,290	-				-0.5
3,888,290	-				-1.4
3,888,290	-				+0.1
3,888,295	+				-0.6
3,888,295	+				-1.2
3,888,295	+				-0.2
3,888,296	-				+0.8
3,888,296	-				-1.8
3,888,322	-				-2.7
3,888,458	+				-1.8
3,888,458	+				+0.1
3,888,458	+				+2.7
3,888,458	+				-0.1
3,888,458	+				+0.4
3,888,458	+				+1.3
3,888,458	+				-0.2
3,888,458	+				-2.2
3,888,458	+				-2.1
3,888,458	+				+0.5
3,888,459	-		PFLU_RS17135	0.10	-0.9
3,888,459	-		PFLU_RS17135	0.10	+0.9
3,888,459	-		PFLU_RS17135	0.10	-1.0
3,888,459	-		PFLU_RS17135	0.10	-1.4
3,888,459	-		PFLU_RS17135	0.10	+1.4
3,888,459	-		PFLU_RS17135	0.10	+0.5
3,888,459	-		PFLU_RS17135	0.10	+2.1
3,888,459	-		PFLU_RS17135	0.10	+2.0
3,888,459	-		PFLU_RS17135	0.10	-0.2
3,888,459	-		PFLU_RS17135	0.10	-0.0
3,888,459	-		PFLU_RS17135	0.10	-1.4
3,888,459	-		PFLU_RS17135	0.10	+1.0
3,888,523	+		PFLU_RS17135	0.15	+1.0
3,888,523	+		PFLU_RS17135	0.15	-1.8
3,888,523	+		PFLU_RS17135	0.15	-1.0
3,888,523	+		PFLU_RS17135	0.15	-0.1
3,888,524	-		PFLU_RS17135	0.15	-2.4
3,888,524	-		PFLU_RS17135	0.15	+2.8
3,888,524	-		PFLU_RS17135	0.15	-1.2
3,888,524	-		PFLU_RS17135	0.15	-0.7
3,888,524	-		PFLU_RS17135	0.15	-1.2
3,888,524	-		PFLU_RS17135	0.15	-2.3
3,888,524	-		PFLU_RS17135	0.15	+2.9
3,888,706	-		PFLU_RS17135	0.30	+1.2
3,888,805	+		PFLU_RS17135	0.38	+0.2
3,888,806	-		PFLU_RS17135	0.38	+1.9
3,888,806	-		PFLU_RS17135	0.38	+1.4
3,888,988	-		PFLU_RS17135	0.53	-1.8
3,889,000	+		PFLU_RS17135	0.54	-1.2
3,889,000	+		PFLU_RS17135	0.54	-0.6
3,889,000	+		PFLU_RS17135	0.54	-0.1
3,889,001	-		PFLU_RS17135	0.54	-0.0
3,889,001	-		PFLU_RS17135	0.54	-0.2
3,889,492	+				+0.8
3,889,492	+				-0.9
3,889,493	-				-1.9
3,889,493	-				-0.1
3,889,796	+				-0.3
3,889,796	+				+1.4
3,889,796	+				-1.9
3,889,796	+				+1.8
3,889,797	-				-1.4
3,889,848	+				+0.7
3,889,849	-				+2.1
3,890,007	+		PFLU_RS17140	0.12	-0.9
3,890,008	-		PFLU_RS17140	0.12	+1.4
3,890,157	+		PFLU_RS17140	0.16	-0.0
3,890,157	+		PFLU_RS17140	0.16	+0.6
3,890,157	+		PFLU_RS17140	0.16	-0.9
3,890,157	+		PFLU_RS17140	0.16	+1.7
3,890,158	-		PFLU_RS17140	0.16	+0.7
3,890,523	-		PFLU_RS17140	0.26	-2.3