Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11700

Experiment: 4-Acetoxy-3-methoxycinnamic 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Acetoxy-3-methoxycinnamic 2 mM (C)
2,594,687	+				-1.9
2,594,687	+				+3.0
2,594,687	+				+1.2
2,594,701	+				-0.6
2,594,701	+				-2.1
2,594,701	+				-0.9
2,594,701	+				-2.1
2,594,701	+				-1.9
2,594,758	-				-1.0
2,594,758	-				+4.0
2,594,758	-				+0.4
2,594,827	+		PFLU_RS11695	0.16	-1.1
2,594,827	+		PFLU_RS11695	0.16	-0.1
2,594,827	+		PFLU_RS11695	0.16	-1.6
2,594,827	+		PFLU_RS11695	0.16	+1.6
2,594,827	+		PFLU_RS11695	0.16	-0.6
2,594,828	-		PFLU_RS11695	0.16	-0.9
2,594,828	-		PFLU_RS11695	0.16	-0.7
2,594,828	-		PFLU_RS11695	0.16	-1.1
2,594,908	+		PFLU_RS11695	0.26	-0.9
2,594,908	+		PFLU_RS11695	0.26	+0.4
2,594,908	+		PFLU_RS11695	0.26	-0.6
2,594,908	+		PFLU_RS11695	0.26	-0.6
2,594,909	-		PFLU_RS11695	0.26	+1.7
2,595,056	-		PFLU_RS11695	0.44	-1.4
2,595,178	+		PFLU_RS11695	0.59	+2.6
2,595,178	+		PFLU_RS11695	0.59	-1.6
2,595,178	+		PFLU_RS11695	0.59	-2.3
2,595,178	+		PFLU_RS11695	0.59	-2.6
2,595,178	+		PFLU_RS11695	0.59	+0.4
2,595,178	+		PFLU_RS11695	0.59	+0.7
2,595,178	+		PFLU_RS11695	0.59	-2.1
2,595,178	+		PFLU_RS11695	0.59	-0.6
2,595,178	+		PFLU_RS11695	0.59	+2.2
2,595,178	+		PFLU_RS11695	0.59	-2.1
2,595,178	+		PFLU_RS11695	0.59	-1.2
2,595,178	+		PFLU_RS11695	0.59	-2.4
2,595,178	+		PFLU_RS11695	0.59	+3.3
2,595,179	-		PFLU_RS11695	0.59	-1.4
2,595,179	-		PFLU_RS11695	0.59	+1.8
2,595,179	-		PFLU_RS11695	0.59	-2.0
2,595,179	-		PFLU_RS11695	0.59	-0.4
2,595,179	-		PFLU_RS11695	0.59	+0.9
2,595,179	-		PFLU_RS11695	0.59	-2.5
2,595,179	-		PFLU_RS11695	0.59	+3.1
2,595,179	-		PFLU_RS11695	0.59	-0.5
2,595,179	-		PFLU_RS11695	0.59	-3.5
2,595,179	-		PFLU_RS11695	0.59	-0.6
2,595,179	-		PFLU_RS11695	0.59	-1.7
2,595,179	-		PFLU_RS11695	0.59	+1.3
2,595,179	-		PFLU_RS11695	0.59	+0.9
2,595,184	+		PFLU_RS11695	0.59	-0.1
2,595,184	+		PFLU_RS11695	0.59	+1.8
2,595,185	-		PFLU_RS11695	0.60	-0.9
2,595,185	-		PFLU_RS11695	0.60	-0.9
2,595,205	+		PFLU_RS11695	0.62	-3.0
2,595,206	-		PFLU_RS11695	0.62	+1.5
2,595,251	+		PFLU_RS11695	0.68	+1.1
2,595,252	-		PFLU_RS11695	0.68	-1.1
2,595,252	-		PFLU_RS11695	0.68	-1.9
2,595,280	+		PFLU_RS11695	0.71	-0.1
2,595,280	+		PFLU_RS11695	0.71	+2.6
2,595,280	+		PFLU_RS11695	0.71	+0.4
2,595,281	-		PFLU_RS11695	0.71	+3.4
2,595,281	-		PFLU_RS11695	0.71	-0.1
2,595,281	-		PFLU_RS11695	0.71	+1.2
2,595,281	-		PFLU_RS11695	0.71	-1.9
2,595,281	-		PFLU_RS11695	0.71	+3.4
2,595,298	+		PFLU_RS11695	0.73	+0.4
2,595,298	+		PFLU_RS11695	0.73	+1.1
2,595,298	+		PFLU_RS11695	0.73	+2.3
2,595,298	+		PFLU_RS11695	0.73	-0.9
2,595,298	+		PFLU_RS11695	0.73	+1.1
2,595,298	+		PFLU_RS11695	0.73	-1.0
2,595,298	+		PFLU_RS11695	0.73	+1.0
2,595,298	+		PFLU_RS11695	0.73	+0.2
2,595,298	+		PFLU_RS11695	0.73	-1.6
2,595,298	+		PFLU_RS11695	0.73	-0.6
2,595,299	-		PFLU_RS11695	0.73	+0.4
2,595,299	-		PFLU_RS11695	0.73	+0.6
2,595,299	-		PFLU_RS11695	0.73	-2.0
2,595,299	-		PFLU_RS11695	0.73	+1.1
2,595,299	-		PFLU_RS11695	0.73	-1.4
2,595,299	-		PFLU_RS11695	0.73	+0.1
2,595,299	-		PFLU_RS11695	0.73	-2.9
2,595,299	-		PFLU_RS11695	0.73	-0.3
2,595,299	-		PFLU_RS11695	0.73	-0.3
2,595,299	-		PFLU_RS11695	0.73	-0.1
2,595,299	-		PFLU_RS11695	0.73	+3.6
2,595,299	-		PFLU_RS11695	0.73	+0.9
2,595,358	+		PFLU_RS11695	0.80	+0.4
2,595,358	+		PFLU_RS11695	0.80	-1.1
2,595,358	+		PFLU_RS11695	0.80	+2.0
2,595,358	+		PFLU_RS11695	0.80	-0.8
2,595,358	+		PFLU_RS11695	0.80	+0.4
2,595,358	+		PFLU_RS11695	0.80	+0.4
2,595,358	+		PFLU_RS11695	0.80	+1.0
2,595,359	-		PFLU_RS11695	0.81	+1.9
2,595,359	-		PFLU_RS11695	0.81	+1.0
2,595,391	+		PFLU_RS11695	0.84	-2.5
2,595,392	-		PFLU_RS11695	0.85	-1.4
2,595,392	-		PFLU_RS11695	0.85	-1.3
2,595,567	+				+2.3
2,595,567	+				+0.1
2,595,567	+				+1.2
2,595,567	+				+2.3
2,595,567	+				-1.6
2,595,567	+				-1.1
2,595,568	-				-1.4
2,595,568	-				-1.7
2,595,568	-				+2.0
2,595,568	-				-1.4
2,595,568	-				-1.6
2,595,568	-				+2.2
2,595,568	-				-1.9
2,595,568	-				-3.1
2,595,632	+				+1.7
2,595,632	+				+0.1
2,595,639	-				-0.9
2,596,235	+		PFLU_RS11700	0.65	-0.5
2,596,235	+		PFLU_RS11700	0.65	-1.4
2,596,235	+		PFLU_RS11700	0.65	-0.9
2,596,235	+		PFLU_RS11700	0.65	-1.3
2,596,236	-		PFLU_RS11700	0.65	-0.5
2,596,236	-		PFLU_RS11700	0.65	+0.1
2,596,306	+		PFLU_RS11700	0.73	-2.1
2,596,306	+		PFLU_RS11700	0.73	-1.3
2,596,442	+		PFLU_RS11700	0.87	+1.2
2,596,442	+		PFLU_RS11700	0.87	-1.7
2,596,442	+		PFLU_RS11700	0.87	-1.5
2,596,442	+		PFLU_RS11700	0.87	+0.1
2,596,443	-		PFLU_RS11700	0.88	-0.3
2,596,443	-		PFLU_RS11700	0.88	+0.1
2,596,443	-		PFLU_RS11700	0.88	-0.6
2,596,443	-		PFLU_RS11700	0.88	-0.3
2,596,443	-		PFLU_RS11700	0.88	+0.2
2,596,443	-		PFLU_RS11700	0.88	-0.9
2,596,455	+		PFLU_RS11700	0.89	-2.8
2,596,455	+		PFLU_RS11700	0.89	-1.0
2,596,455	+		PFLU_RS11700	0.89	-2.3
2,596,455	+		PFLU_RS11700	0.89	+1.1
2,596,548	-				-2.4
2,596,557	+				+1.0
2,596,557	+				-1.9
2,596,558	-				-2.5
2,596,558	-				+0.7
2,596,558	-				+0.6
2,596,572	+				+0.7
2,596,572	+				+1.6
2,596,572	+				+0.3
2,596,572	+				+1.7
2,596,573	-				+0.4
2,596,573	-				+0.4
2,596,573	-				-1.6
2,596,573	-				-1.0
2,596,573	-				+0.2
2,596,578	+				-0.8
2,596,578	+				-1.1
2,596,578	+				+2.4
2,596,579	-				-0.0
2,596,579	-				-1.1
2,596,579	-				+0.4
2,596,579	-				+0.1
2,596,579	-				-0.2
2,596,579	-				-0.1
2,596,580	+				+2.3
2,596,580	+				-0.8
2,596,580	+				-0.6
2,596,580	+				-1.1
2,596,580	+				-0.1
2,596,581	-				+0.6
2,596,581	-				-1.0
2,596,581	-				+0.4
2,596,581	-				-2.8
2,596,581	-				+1.1
2,596,581	-				+0.8
2,596,581	-				+2.2
2,596,581	-				-0.7
2,596,581	-				-1.7
2,596,581	-				+0.8
2,596,821	+		PFLU_RS11705	0.31	+0.8
2,596,821	+		PFLU_RS11705	0.31	-2.0
2,596,821	+		PFLU_RS11705	0.31	-1.4
2,597,197	+		PFLU_RS11705	0.79	+1.2
2,597,197	+		PFLU_RS11705	0.79	+1.2
2,597,197	+		PFLU_RS11705	0.79	-1.4
2,597,198	-		PFLU_RS11705	0.80	-2.7
2,597,198	-		PFLU_RS11705	0.80	-0.6
2,597,198	-		PFLU_RS11705	0.80	+2.4
2,597,198	-		PFLU_RS11705	0.80	+1.0
2,597,198	-		PFLU_RS11705	0.80	+0.7
2,597,198	-		PFLU_RS11705	0.80	-2.7
2,597,281	+				+2.6
2,597,281	+				+1.4
2,597,281	+				-2.6
2,597,281	+				-0.8
2,597,281	+				-0.1
2,597,282	-				-1.3
2,597,288	+				-0.7
2,597,289	-				+1.6
2,597,356	+				+1.4
2,597,356	+				-2.5
2,597,357	-				-0.9
2,597,357	-				-1.6
2,597,357	-				-3.1
2,597,357	-				+1.4
2,597,357	-				+0.8
2,597,357	-				-0.1
2,597,357	-				-0.1
2,597,495	+		PFLU_RS11710	0.14	-1.8
2,597,495	+		PFLU_RS11710	0.14	+1.4
2,597,496	-		PFLU_RS11710	0.14	-3.0
2,597,496	-		PFLU_RS11710	0.14	-1.0
2,597,496	-		PFLU_RS11710	0.14	-2.4
2,597,496	-		PFLU_RS11710	0.14	+1.2
2,597,496	-		PFLU_RS11710	0.14	-2.0
2,597,496	-		PFLU_RS11710	0.14	-0.6