Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11220

Experiment: 4-Acetoxy-3-methoxycinnamic 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Acetoxy-3-methoxycinnamic 2 mM (C)
2,479,915	-		PFLU_RS11215	0.38	+0.5
2,479,944	+		PFLU_RS11215	0.42	-1.6
2,480,118	+		PFLU_RS11215	0.64	-0.1
2,480,119	-		PFLU_RS11215	0.64	-2.0
2,480,119	-		PFLU_RS11215	0.64	-0.8
2,480,197	+		PFLU_RS11215	0.75	+1.3
2,480,197	+		PFLU_RS11215	0.75	+2.2
2,480,198	-		PFLU_RS11215	0.75	+0.6
2,480,198	-		PFLU_RS11215	0.75	-2.5
2,480,198	-		PFLU_RS11215	0.75	-1.9
2,480,198	-		PFLU_RS11215	0.75	+0.5
2,480,326	+				+0.5
2,480,326	+				-1.3
2,480,327	-				-1.8
2,480,329	-				-2.6
2,480,392	+				-1.8
2,480,393	-				+2.4
2,480,460	-				+0.5
2,480,460	-				+2.9
2,480,460	-				+1.7
2,480,460	-				-1.3
2,480,499	+				+1.8
2,480,611	+				-2.6
2,480,691	+		PFLU_RS11220	0.11	-0.2
2,480,691	+		PFLU_RS11220	0.11	+1.5
2,480,692	-		PFLU_RS11220	0.11	-2.0
2,480,692	-		PFLU_RS11220	0.11	+0.3
2,480,692	-		PFLU_RS11220	0.11	-0.8
2,480,692	-		PFLU_RS11220	0.11	-0.0
2,480,692	-		PFLU_RS11220	0.11	-0.4
2,480,692	-		PFLU_RS11220	0.11	+1.0
2,480,787	+		PFLU_RS11220	0.21	+1.8
2,480,788	-		PFLU_RS11220	0.21	+1.5
2,480,881	-		PFLU_RS11220	0.31	+0.9
2,480,934	+		PFLU_RS11220	0.37	+1.1
2,480,934	+		PFLU_RS11220	0.37	+0.4
2,480,934	+		PFLU_RS11220	0.37	-1.5
2,480,935	-		PFLU_RS11220	0.37	+1.0
2,481,015	+		PFLU_RS11220	0.46	+0.2
2,481,016	-		PFLU_RS11220	0.46	+1.6
2,481,101	+		PFLU_RS11220	0.55	-2.4
2,481,102	-		PFLU_RS11220	0.56	-1.0
2,481,190	-		PFLU_RS11220	0.65	+1.0
2,481,190	-		PFLU_RS11220	0.65	-2.5
2,481,201	+		PFLU_RS11220	0.66	-0.0
2,481,201	+		PFLU_RS11220	0.66	-2.7
2,481,226	-		PFLU_RS11220	0.69	+0.9
2,481,273	+		PFLU_RS11220	0.74	-1.5
2,481,370	-		PFLU_RS11220	0.85	-2.9
2,481,659	+		PFLU_RS11225	0.17	+0.2
2,481,659	+		PFLU_RS11225	0.17	-1.1
2,481,660	-		PFLU_RS11225	0.17	-2.4
2,481,698	+		PFLU_RS11225	0.27	-1.1
2,481,699	-		PFLU_RS11225	0.27	-1.8
2,481,699	-		PFLU_RS11225	0.27	-2.3
2,481,790	+		PFLU_RS11225	0.52	-2.8
2,481,790	+		PFLU_RS11225	0.52	-2.3
2,481,790	+		PFLU_RS11225	0.52	-0.3
2,481,791	-		PFLU_RS11225	0.52	-1.1
2,481,937	+				-1.6
2,481,938	-				-0.5
2,481,938	-				-0.5
2,481,938	-				-1.5
2,481,938	-				-0.8
2,481,964	+				+0.5
2,482,130	+				+0.3
2,482,130	+				-0.1
2,482,131	-				+0.5
2,482,194	-		PFLU_RS11230	0.10	-0.8
2,482,203	-		PFLU_RS11230	0.11	-0.8
2,482,268	+		PFLU_RS11230	0.14	+1.8
2,482,268	+		PFLU_RS11230	0.14	-1.5
2,482,269	-		PFLU_RS11230	0.15	+1.6
2,482,269	-		PFLU_RS11230	0.15	-1.8
2,482,269	-		PFLU_RS11230	0.15	-1.8
2,482,269	-		PFLU_RS11230	0.15	+1.7
2,482,269	-		PFLU_RS11230	0.15	+1.3
2,482,283	+		PFLU_RS11230	0.15	+1.0
2,482,283	+		PFLU_RS11230	0.15	-2.2
2,482,284	-		PFLU_RS11230	0.15	-2.3
2,482,284	-		PFLU_RS11230	0.15	+1.9
2,482,284	-		PFLU_RS11230	0.15	+0.9
2,482,331	+		PFLU_RS11230	0.18	-1.8
2,482,331	+		PFLU_RS11230	0.18	-1.3
2,482,331	+		PFLU_RS11230	0.18	-0.8
2,482,331	+		PFLU_RS11230	0.18	-1.9
2,482,332	-		PFLU_RS11230	0.18	-2.0
2,482,373	-		PFLU_RS11230	0.20	+2.0
2,482,472	+		PFLU_RS11230	0.26	-0.1
2,482,473	-		PFLU_RS11230	0.26	+0.2
2,482,493	-		PFLU_RS11230	0.27	-1.5