Experiment: nitrogen source Ammonium chloride 20mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_750 and Pf6N2E2_751 are separated by 51 nucleotides Pf6N2E2_751 and Pf6N2E2_752 are separated by 322 nucleotides
Pf6N2E2_750 - Transcriptional regulator, DeoR family, at 859,843 to 860,559
_750
Pf6N2E2_751 - Electron transfer flavoprotein, beta subunit, at 860,611 to 860,952
_751
Pf6N2E2_752 - Mobile element protein, at 861,275 to 862,543
_752
Position (kb) 860
861 Strain fitness (log2 ratio) -2
-1
0
1
2 at 859.754 kb on + strand at 859.754 kb on + strand at 859.754 kb on + strand at 859.754 kb on + strand at 859.754 kb on + strand at 859.754 kb on + strand at 859.754 kb on + strand at 859.754 kb on + strand at 859.754 kb on + strand at 859.755 kb on - strand at 859.755 kb on - strand at 859.755 kb on - strand at 859.755 kb on - strand at 859.755 kb on - strand at 859.755 kb on - strand at 859.755 kb on - strand at 859.755 kb on - strand at 859.807 kb on - strand at 859.807 kb on - strand at 859.851 kb on + strand at 860.017 kb on + strand, within Pf6N2E2_750 at 860.017 kb on + strand, within Pf6N2E2_750 at 860.017 kb on + strand, within Pf6N2E2_750 at 860.018 kb on - strand, within Pf6N2E2_750 at 860.018 kb on - strand, within Pf6N2E2_750 at 860.231 kb on - strand, within Pf6N2E2_750 at 860.573 kb on + strand at 860.573 kb on + strand at 860.573 kb on + strand at 860.573 kb on + strand at 860.574 kb on - strand at 860.574 kb on - strand at 860.574 kb on - strand at 860.574 kb on - strand at 860.574 kb on - strand at 860.574 kb on - strand at 860.574 kb on - strand at 860.720 kb on + strand, within Pf6N2E2_751 at 860.720 kb on + strand, within Pf6N2E2_751 at 860.720 kb on + strand, within Pf6N2E2_751 at 860.721 kb on - strand, within Pf6N2E2_751 at 860.721 kb on - strand, within Pf6N2E2_751 at 860.896 kb on + strand, within Pf6N2E2_751 at 860.897 kb on - strand, within Pf6N2E2_751 at 860.940 kb on + strand at 860.950 kb on + strand at 860.951 kb on - strand at 860.951 kb on - strand at 860.951 kb on - strand at 860.968 kb on + strand at 860.968 kb on + strand at 860.969 kb on - strand at 860.969 kb on - strand at 860.979 kb on + strand at 860.979 kb on + strand at 860.979 kb on + strand at 860.979 kb on + strand at 860.979 kb on + strand at 860.979 kb on + strand at 860.980 kb on - strand at 860.980 kb on - strand at 860.980 kb on - strand at 860.980 kb on - strand at 860.980 kb on - strand at 860.980 kb on - strand at 860.998 kb on - strand at 861.019 kb on - strand at 861.019 kb on - strand at 861.019 kb on - strand at 861.019 kb on - strand at 861.019 kb on - strand at 861.019 kb on - strand at 861.019 kb on - strand at 861.019 kb on - strand at 861.019 kb on - strand at 861.019 kb on - strand at 861.019 kb on - strand at 861.019 kb on - strand at 861.019 kb on - strand at 861.023 kb on - strand at 861.023 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction nitrogen source Ammonium chloride 20mM remove 859,754 + +0.9 859,754 + -0.1 859,754 + +1.9 859,754 + -0.2 859,754 + +1.0 859,754 + -0.6 859,754 + -0.3 859,754 + -1.1 859,754 + +1.5 859,755 - +1.4 859,755 - -0.5 859,755 - +0.6 859,755 - -0.3 859,755 - -0.4 859,755 - +1.9 859,755 - +0.6 859,755 - +1.9 859,807 - +1.4 859,807 - +1.9 859,851 + -0.3 860,017 + Pf6N2E2_750 0.24 +0.0 860,017 + Pf6N2E2_750 0.24 +0.0 860,017 + Pf6N2E2_750 0.24 -0.2 860,018 - Pf6N2E2_750 0.24 +0.8 860,018 - Pf6N2E2_750 0.24 -0.7 860,231 - Pf6N2E2_750 0.54 +1.1 860,573 + -0.5 860,573 + -0.1 860,573 + +1.9 860,573 + +0.4 860,574 - -0.1 860,574 - -0.2 860,574 - +0.2 860,574 - +1.2 860,574 - +2.1 860,574 - +0.3 860,574 - +0.1 860,720 + Pf6N2E2_751 0.32 -1.5 860,720 + Pf6N2E2_751 0.32 -1.0 860,720 + Pf6N2E2_751 0.32 -0.1 860,721 - Pf6N2E2_751 0.32 -1.3 860,721 - Pf6N2E2_751 0.32 +0.3 860,896 + Pf6N2E2_751 0.83 +0.9 860,897 - Pf6N2E2_751 0.84 -1.8 860,940 + +1.0 860,950 + -1.9 860,951 - +1.9 860,951 - -0.3 860,951 - +1.0 860,968 + -0.1 860,968 + +1.1 860,969 - -0.2 860,969 - -0.7 860,979 + -0.1 860,979 + -0.7 860,979 + -1.2 860,979 + +0.2 860,979 + +2.2 860,979 + -0.4 860,980 - +0.8 860,980 - +1.9 860,980 - -2.0 860,980 - +1.9 860,980 - -1.3 860,980 - -0.1 860,998 - -0.3 861,019 - +0.9 861,019 - +1.0 861,019 - -1.6 861,019 - +2.0 861,019 - +1.7 861,019 - +1.2 861,019 - +0.9 861,019 - -0.8 861,019 - +0.9 861,019 - -0.5 861,019 - -0.1 861,019 - +0.8 861,019 - +0.2 861,023 - +0.4 861,023 - -0.9
Or see this region's nucleotide sequence