Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS30765

Experiment: Phloretic Acid 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phloretic Acid 2 mM (C)
2,881,121	+		PFLU_RS12770	0.41	-2.7
2,881,121	+		PFLU_RS12770	0.41	+0.6
2,881,122	-		PFLU_RS12770	0.41	-0.4
2,881,122	-		PFLU_RS12770	0.41	+0.2
2,881,122	-		PFLU_RS12770	0.41	-2.1
2,881,122	-		PFLU_RS12770	0.41	+1.2
2,881,122	-		PFLU_RS12770	0.41	-0.1
2,881,211	+		PFLU_RS12770	0.50	+0.8
2,881,212	-		PFLU_RS12770	0.50	-2.1
2,881,356	-		PFLU_RS12770	0.64	-0.2
2,881,491	+		PFLU_RS12770	0.77	-0.4
2,881,491	+		PFLU_RS12770	0.77	+2.6
2,881,491	+		PFLU_RS12770	0.77	+1.2
2,881,492	-		PFLU_RS12770	0.77	-1.2
2,881,568	+		PFLU_RS12770	0.85	+1.2
2,881,568	+		PFLU_RS12770	0.85	-0.8
2,881,568	+		PFLU_RS12770	0.85	-0.0
2,881,569	-		PFLU_RS12770	0.85	+0.8
2,881,569	-		PFLU_RS12770	0.85	-1.0
2,881,613	+		PFLU_RS12770	0.89	-1.8
2,881,613	+		PFLU_RS12770	0.89	+0.5
2,881,613	+		PFLU_RS12770	0.89	-0.8
2,881,613	+		PFLU_RS12770	0.89	+1.1
2,881,614	-		PFLU_RS12770	0.89	-2.2
2,881,614	-		PFLU_RS12770	0.89	+1.0
2,881,644	+				+0.8
2,881,644	+				-1.9
2,881,644	+				-0.0
2,881,721	+				-0.6
2,881,743	+				+0.1
2,881,743	+				-1.0
2,881,743	+				-3.1
2,881,743	+				+0.9
2,881,743	+				+1.2
2,881,744	-				+2.6
2,881,744	-				+2.0
2,881,744	-				-0.4
2,881,744	-				-0.8
2,881,744	-				+5.0
2,881,748	-				-0.4
2,881,748	-				+1.3
2,881,748	-				-0.0
2,881,748	-				+0.7
2,881,748	-				-1.2
2,881,748	-				-1.0
2,881,748	-				-2.4
2,881,748	-				+1.6
2,881,756	-				-1.4
2,881,756	-				+1.0
2,881,756	-				+1.6
2,881,835	+				-2.7
2,881,897	+				-0.4
2,881,897	+				-0.0
2,881,897	+				-0.0
2,881,897	+				+2.7
2,881,897	+				+3.8
2,881,897	+				-2.2
2,881,897	+				-0.8
2,881,897	+				-1.9
2,881,897	+				+0.5
2,881,898	-				+1.9
2,881,898	-				+0.1
2,881,898	-				-2.2
2,881,898	-				-2.6
2,881,898	-				+2.6
2,881,901	-				+0.8
2,881,901	-				+2.5
2,881,901	-				-0.9
2,882,069	+				-0.4
2,882,070	-				-0.3
2,882,081	-				+0.6
2,882,084	-				-0.1
2,882,097	-				+1.5
2,882,097	-				+1.9
2,882,118	+				-1.9
2,882,118	+				-1.0
2,882,119	-				-0.0
2,882,119	-				-1.8
2,882,230	-				+1.2
2,882,242	-				+1.4
2,882,242	-				-1.4
2,882,249	+				-0.8
2,882,249	+				-1.0
2,882,310	+				-1.2
2,882,310	+				+3.1
2,882,311	-				-0.8
2,882,311	-				-0.4
2,882,311	-				+1.9
2,882,311	-				+0.9
2,882,312	+				-2.0
2,882,312	+				-1.2
2,882,312	+				+4.2
2,882,312	+				+2.2
2,882,312	+				+0.1
2,882,312	+				+2.5
2,882,312	+				+2.4
2,882,313	-				-1.4
2,882,313	-				-2.3
2,882,313	-				+1.8
2,882,313	-				-1.6
2,882,313	-				-1.8
2,882,313	-				+3.4
2,882,313	-				-0.4
2,882,313	-				+3.2
2,882,938	+		PFLU_RS12775	0.40	-0.8
2,882,938	+		PFLU_RS12775	0.40	+2.4
2,882,938	+		PFLU_RS12775	0.40	+0.8
2,882,939	-		PFLU_RS12775	0.40	-0.6
2,882,952	-		PFLU_RS12775	0.41	+1.6
2,882,952	-		PFLU_RS12775	0.41	-2.8
2,882,952	-		PFLU_RS12775	0.41	+2.2
2,882,957	+		PFLU_RS12775	0.41	+1.8
2,882,958	-		PFLU_RS12775	0.41	-2.2
2,882,958	-		PFLU_RS12775	0.41	+1.8