Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21465

Experiment: Phloretic Acid 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phloretic Acid 2 mM (C)
4,825,764	+		PFLU_RS21460	0.39	+3.1
4,825,764	+		PFLU_RS21460	0.39	-2.5
4,825,765	-		PFLU_RS21460	0.39	+0.7
4,825,765	-		PFLU_RS21460	0.39	+1.3
4,825,817	+		PFLU_RS21460	0.43	-0.4
4,825,926	+		PFLU_RS21460	0.51	-0.6
4,825,927	-		PFLU_RS21460	0.51	+2.7
4,825,968	-		PFLU_RS21460	0.54	-0.8
4,826,132	+		PFLU_RS21460	0.66	+0.7
4,826,133	-		PFLU_RS21460	0.66	-1.8
4,826,139	+		PFLU_RS21460	0.67	+1.1
4,826,139	+		PFLU_RS21460	0.67	-1.0
4,826,139	+		PFLU_RS21460	0.67	-0.5
4,826,140	-		PFLU_RS21460	0.67	+2.0
4,826,140	-		PFLU_RS21460	0.67	-0.0
4,826,187	+		PFLU_RS21460	0.70	+1.6
4,826,187	+		PFLU_RS21460	0.70	+3.0
4,826,187	+		PFLU_RS21460	0.70	-0.5
4,826,188	-		PFLU_RS21460	0.70	-1.5
4,826,188	-		PFLU_RS21460	0.70	+1.0
4,826,188	-		PFLU_RS21460	0.70	+0.4
4,826,225	-		PFLU_RS21460	0.73	+2.1
4,826,292	+		PFLU_RS21460	0.78	+2.4
4,826,292	+		PFLU_RS21460	0.78	+3.0
4,826,292	+		PFLU_RS21460	0.78	-0.4
4,826,292	+		PFLU_RS21460	0.78	-0.7
4,826,292	+		PFLU_RS21460	0.78	-0.4
4,826,293	-		PFLU_RS21460	0.78	-2.4
4,826,293	-		PFLU_RS21460	0.78	+1.8
4,826,293	-		PFLU_RS21460	0.78	+1.5
4,826,293	-		PFLU_RS21460	0.78	-2.6
4,826,293	-		PFLU_RS21460	0.78	+2.2
4,826,412	+		PFLU_RS21460	0.87	+1.2
4,826,413	-		PFLU_RS21460	0.87	+2.8
4,826,440	+		PFLU_RS21460	0.89	+1.4
4,826,440	+		PFLU_RS21460	0.89	-0.7
4,826,440	+		PFLU_RS21460	0.89	-1.4
4,826,441	-		PFLU_RS21460	0.89	-2.1
4,826,441	-		PFLU_RS21460	0.89	+0.2
4,826,441	-		PFLU_RS21460	0.89	+2.0
4,826,441	-		PFLU_RS21460	0.89	-1.0
4,826,441	-		PFLU_RS21460	0.89	-2.1
4,826,441	-		PFLU_RS21460	0.89	+2.1
4,826,568	+				+1.4
4,826,568	+				-1.9
4,826,568	+				-1.0
4,826,568	+				-0.4
4,826,568	+				+1.9
4,826,569	-				-0.6
4,826,569	-				+1.4
4,826,569	-				-0.0
4,826,569	-				-1.7
4,826,569	-				+0.2
4,826,569	-				-0.9
4,826,569	-				+1.2
4,826,574	+				-1.9
4,826,574	+				-2.0
4,826,574	+				-0.5
4,826,574	+				-1.7
4,826,575	-				+1.5
4,826,575	-				-1.2
4,826,609	+				-1.9
4,826,718	+				+1.6
4,826,718	+				+1.0
4,826,718	+				+0.2
4,826,805	+		PFLU_RS21465	0.33	-0.4
4,826,805	+		PFLU_RS21465	0.33	+2.0
4,826,805	+		PFLU_RS21465	0.33	+1.6
4,826,805	+		PFLU_RS21465	0.33	+0.5
4,826,805	+		PFLU_RS21465	0.33	-1.5
4,826,806	-		PFLU_RS21465	0.33	-1.2
4,826,806	-		PFLU_RS21465	0.33	+2.9
4,826,871	+		PFLU_RS21465	0.63	+2.0
4,826,871	+		PFLU_RS21465	0.63	+1.5
4,826,871	+		PFLU_RS21465	0.63	+3.1
4,826,871	+		PFLU_RS21465	0.63	-0.7
4,826,872	-		PFLU_RS21465	0.63	+0.1
4,826,872	-		PFLU_RS21465	0.63	-1.6
4,826,889	+		PFLU_RS21465	0.71	+0.3
4,826,889	+		PFLU_RS21465	0.71	-2.0
4,826,889	+		PFLU_RS21465	0.71	-0.8
4,826,889	+		PFLU_RS21465	0.71	+4.4
4,826,889	+		PFLU_RS21465	0.71	+0.3
4,826,890	-		PFLU_RS21465	0.71	-0.2
4,826,890	-		PFLU_RS21465	0.71	+2.9
4,826,890	-		PFLU_RS21465	0.71	-1.1
4,826,890	-		PFLU_RS21465	0.71	+3.4
4,826,912	+		PFLU_RS21465	0.81	-1.5
4,826,912	+		PFLU_RS21465	0.81	-2.7
4,826,912	+		PFLU_RS21465	0.81	-2.7
4,826,913	-		PFLU_RS21465	0.82	-2.0
4,826,942	+				+0.6
4,826,943	-				+3.3
4,826,943	-				+0.5
4,826,943	-				-2.3
4,826,943	-				-0.4
4,826,943	-				+2.0
4,827,004	+				-1.7
4,827,004	+				+0.9
4,827,004	+				-0.2
4,827,005	-				+0.7
4,827,005	-				-0.8
4,827,005	-				+0.4
4,827,005	-				-1.6
4,827,010	+				-0.0
4,827,010	+				-2.0
4,827,018	+				-2.1
4,827,018	+				+2.8
4,827,019	-				-1.0
4,827,019	-				-1.0
4,827,019	-				-1.4
4,827,078	-				+2.5
4,827,497	-		PFLU_RS21470	0.33	-0.8
4,827,784	+		PFLU_RS21470	0.54	+0.7
4,827,784	+		PFLU_RS21470	0.54	-1.2
4,827,784	+		PFLU_RS21470	0.54	-0.4
4,827,785	-		PFLU_RS21470	0.54	-1.6
4,827,785	-		PFLU_RS21470	0.54	-1.2
4,827,785	-		PFLU_RS21470	0.54	-1.9
4,827,785	-		PFLU_RS21470	0.54	-0.4
4,827,785	-		PFLU_RS21470	0.54	-1.1
4,827,949	+		PFLU_RS21470	0.65	+2.0