Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS16450

Experiment: Phloretic Acid 2 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phloretic Acid 2 mM (C)
3,732,299	+				-1.4
3,732,299	+				+1.0
3,732,299	+				-2.9
3,732,299	+				+0.8
3,732,299	+				+0.6
3,732,299	+				-1.4
3,732,299	+				-0.5
3,732,300	-				+1.7
3,732,300	-				-2.0
3,732,300	-				-0.4
3,732,381	+				+1.2
3,732,381	+				+1.3
3,732,786	+		PFLU_RS16445	0.53	-1.6
3,732,786	+		PFLU_RS16445	0.53	+2.4
3,732,796	+		PFLU_RS16445	0.55	+0.8
3,732,796	+		PFLU_RS16445	0.55	-0.1
3,732,911	-		PFLU_RS16445	0.70	+0.6
3,732,911	-		PFLU_RS16445	0.70	+2.0
3,732,911	-		PFLU_RS16445	0.70	-1.8
3,732,911	-		PFLU_RS16445	0.70	-2.0
3,733,014	+		PFLU_RS16445	0.83	-1.9
3,733,093	+				+2.0
3,733,093	+				-1.6
3,733,093	+				+1.0
3,733,093	+				-1.6
3,733,094	-				-1.6
3,733,094	-				-1.6
3,733,130	+				-1.6
3,733,131	-				+2.2
3,733,136	+				+1.6
3,733,136	+				-2.0
3,733,136	+				-3.2
3,733,148	+				+2.3
3,733,149	-				+1.7
3,733,155	+				-1.9
3,733,155	+				+3.9
3,733,155	+				-2.8
3,733,155	+				-0.0
3,733,155	+				-0.1
3,733,155	+				-0.4
3,733,156	-				-1.0
3,733,156	-				-1.4
3,733,156	-				+1.4
3,733,156	-				+1.6
3,733,156	-				+3.7
3,733,156	-				-0.1
3,733,482	+		PFLU_RS16450	0.57	+0.8
3,733,482	+		PFLU_RS16450	0.57	+1.2
3,733,482	+		PFLU_RS16450	0.57	+1.3
3,733,482	+		PFLU_RS16450	0.57	+1.7
3,733,482	+		PFLU_RS16450	0.57	+2.9
3,733,483	-		PFLU_RS16450	0.58	+0.5
3,733,483	-		PFLU_RS16450	0.58	-1.0
3,733,483	-		PFLU_RS16450	0.58	+0.7
3,733,485	+		PFLU_RS16450	0.58	-1.9
3,733,485	+		PFLU_RS16450	0.58	+2.6
3,733,556	-		PFLU_RS16450	0.70	+1.8
3,733,556	-		PFLU_RS16450	0.70	+0.2
3,733,556	-		PFLU_RS16450	0.70	-2.2
3,733,581	-		PFLU_RS16450	0.74	+0.1
3,733,581	-		PFLU_RS16450	0.74	-1.8
3,733,659	+		PFLU_RS16450	0.87	-1.2
3,733,660	-		PFLU_RS16450	0.87	+2.8
3,733,660	-		PFLU_RS16450	0.87	-1.9
3,733,660	-		PFLU_RS16450	0.87	-1.6
3,733,715	+				+1.6
3,733,755	+				-3.1
3,733,756	-				-1.4
3,733,759	+				-2.7
3,733,759	+				+2.0
3,733,759	+				-1.2
3,733,759	+				-2.0
3,733,759	+				+0.3
3,733,759	+				+0.6
3,733,759	+				-1.8
3,733,759	+				+1.5
3,733,760	-				-1.0
3,733,760	-				+1.6
3,733,760	-				-0.1
3,733,760	-				+2.8
3,733,843	+		PFLU_RS16455	0.17	+3.0
3,734,141	+		PFLU_RS16455	0.62	-0.0
3,734,141	+		PFLU_RS16455	0.62	+1.0
3,734,141	+		PFLU_RS16455	0.62	-0.2
3,734,142	-		PFLU_RS16455	0.62	+0.9
3,734,142	-		PFLU_RS16455	0.62	+1.6
3,734,204	+		PFLU_RS16455	0.71	-2.2
3,734,204	+		PFLU_RS16455	0.71	+1.6
3,734,204	+		PFLU_RS16455	0.71	-0.0
3,734,204	+		PFLU_RS16455	0.71	-0.8
3,734,204	+		PFLU_RS16455	0.71	+0.8
3,734,204	+		PFLU_RS16455	0.71	-1.1
3,734,205	-		PFLU_RS16455	0.72	+1.1
3,734,205	-		PFLU_RS16455	0.72	-1.9
3,734,205	-		PFLU_RS16455	0.72	-0.8
3,734,205	-		PFLU_RS16455	0.72	+0.6
3,734,205	-		PFLU_RS16455	0.72	-0.4
3,734,205	-		PFLU_RS16455	0.72	-1.4
3,734,206	+		PFLU_RS16455	0.72	+0.5
3,734,207	-		PFLU_RS16455	0.72	-2.5
3,734,207	-		PFLU_RS16455	0.72	-1.6
3,734,207	-		PFLU_RS16455	0.72	-1.8
3,734,288	-		PFLU_RS16455	0.84	-1.8
3,734,363	+				-0.8
3,734,363	+				-0.0
3,734,364	-				-3.3
3,734,364	-				+1.9
3,734,390	+				-0.4
3,734,405	-				-2.1
3,734,405	-				+1.9
3,734,434	+				+3.8
3,734,434	+				-1.1
3,734,435	-				+0.0
3,734,435	-				+1.9
3,734,435	-				-1.1
3,734,435	-				+1.0
3,734,435	-				-2.4
3,734,507	+				-3.6
3,734,507	+				-0.9
3,734,508	-				+1.4
3,734,508	-				-2.2
3,734,508	-				-2.1
3,734,699	-		PFLU_RS16460	0.17	-1.2
3,734,724	+		PFLU_RS16460	0.20	-0.5
3,734,724	+		PFLU_RS16460	0.20	+1.6
3,734,724	+		PFLU_RS16460	0.20	-1.8
3,734,724	+		PFLU_RS16460	0.20	+0.2
3,734,724	+		PFLU_RS16460	0.20	-0.2
3,734,724	+		PFLU_RS16460	0.20	+3.3
3,734,724	+		PFLU_RS16460	0.20	+1.9
3,734,725	-		PFLU_RS16460	0.20	-0.8
3,734,725	-		PFLU_RS16460	0.20	-0.2
3,734,725	-		PFLU_RS16460	0.20	+2.0